G19663 (hip1)


Basic Information

Item Value
gene id G19663
gene name hip1
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 26296499 ~ 26300091 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU26800
CTTTATTAGAAATGCCAGAGAGCGTAAAATGTGAAGATTAAGATGTTTATTAGACATGCTGGGTCTCTCAATTGCCAACGAAACATTGGCTTGATTTATTACAGCTAATTAAGAAAGTTAATTAAGAAagataattgagaaaataacaaTGTGTCACCTTCTCATTGAGCTGATTCTGCAGGGCTTCTGCAGTCTTCACCCCGCTCTCCCTTTCAGTCGCCAGCGAGCTCTGTACTCGTTCTAGCTCCTCCCCGCGGGAAGCCAGCTCTGCCTCCACCTTCGACAAGGACTGCACCAGCTCCGCCTTCTCAGACTCAAGGGCAACCAGCTGGGTGCCGAGCACCTCACTTGACACCTGTTGTGACGAGGCCATGGTGGTCTTCAGGGAGTCCAGCTCCGTCCTGCTGGACACCAGCTCTCTCTGTAGCTCCTGAAGCTGCTCCAGCTGCTCCCTCTCctgtctgtctgcaacCTCCTGAGCGGCCTTCACCTTCCCTTGCATTTCTCTCCTCACTGCGTCCACTTCATCCTGTGCCACACGAGCCACCGTCATCTGCCGGGTCACCTCTGCGTtCTTTCTCAGCAGGTCTGCATGACTCTGAACCAGCTCTGAGTACTTCTCCTTCAGTTTGGTGTAGCGCTGCTCATTGGCCTGAGCTTTTTTCTCTATCTCCGTCAGGCTCCGCTGCTCCTTCTCCGTGTCCTCTCGGACCCTCCGCAGGTCGTCCAGCTCCGCCTTCAGGAACTCGCTCTCTCCTGCCGCCTGCAGCCTCAGGTGGCTCTGCTCGGCAAGCTCCGCCTCCAGCTCATTGACACGCCCCCTCAGGGCCTGACACAAGCGACC

Function

symbol description
hip1 Predicted to enable actin filament binding activity; anion binding activity; and clathrin binding activity. Acts upstream of or within chordate embryonic development and response to yeast. Predicted to be located in cytoplasm. Predicted to be active in actin cortical patch; clathrin-coated vesicle; and presynapse. Predicted to be extrinsic component of postsynaptic membrane. Orthologous to human HIP1 (huntingtin interacting protein 1).

NR:

description
PREDICTED: huntingtin-interacting protein 1 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU26800 True 844 lncRNA 0.55 5 26296499 26300091

Neighbor

gene id symbol gene type direction distance location
bcl7bb bcl7b,LOC102791254 coding downstream 34704 26259446 ~ 26261795 (-)
baz1b baz1b,LOC102789732 coding downstream 37483 26242881 ~ 26259016 (-)
LOC120572189 LOC103357875,LOC102300835,LOC102196867,LOC101475975 coding downstream 139954 26135814 ~ 26156545 (-)
dner dner coding downstream 257941 25986594 ~ 26038558 (-)
pid1 pid1,LOC102785909 coding downstream 314284 25950551 ~ 25982215 (-)
gdpd1 gdpd1 coding upstream 37460 26337551 ~ 26348184 (-)
LOC120574272 pde2a coding upstream 171549 26471640 ~ 26663398 (-)
LOC120575574 arap1 coding upstream 383472 26683563 ~ 26744794 (-)
stard10 stard10 coding upstream 448167 26748258 ~ 26762729 (-)
inppl1a inppl1 coding upstream 518993 26819084 ~ 26847951 (-)
G19566 rnf7 non-coding downstream 125931 26168674 ~ 26170568 (-)
G19551 NA non-coding downstream 168079 26124237 ~ 26128420 (-)
G19466 NA non-coding downstream 565384 25721493 ~ 25731115 (-)
G19438 NA non-coding downstream 629270 25622986 ~ 25667229 (-)
G19412 NA non-coding downstream 829993 25430426 ~ 25466506 (-)
G19660 NA non-coding upstream 7646 26307737 ~ 26310671 (-)
G19665 NA non-coding upstream 11526 26311617 ~ 26412574 (-)
G19685 NA non-coding upstream 107197 26407288 ~ 26408748 (-)
G19700 NA non-coding upstream 187767 26487858 ~ 26559669 (-)
G19788 NA non-coding upstream 559692 26859783 ~ 26861307 (-)
trip12 trip12 other downstream 206797 26041295 ~ 26089702 (-)
G19270 ptx3 other downstream 2043586 24248031 ~ 24252913 (-)
G19140 gmps,LOC102797084 other downstream 2468545 23823821 ~ 23827954 (-)
slc33a1 slc33a1 other downstream 2487047 23802515 ~ 23809452 (-)
atm atm,LOC102794456 other downstream 2537673 23729488 ~ 23758826 (-)
LOC120570356 ypelc,ypel2,LOC106931471,LOC106940241,LOC101067200,LOC107659943,LOC106603438,LOC107599611,LOC101078269,LOC104940871 other upstream 6973 26307064 ~ 26334719 (-)
LOC120570434 fam124b other upstream 134190 26434281 ~ 26445935 (-)
cul3b cul3,LOC104924156,LOC100710156,LOC107099750,LOC108240497,LOC104940878,LOC103474461,LOC108428259,LOC102194569,LOC101170875 other upstream 151289 26451380 ~ 26469896 (-)
G19840 NA other upstream 788515 27088606 ~ 27089064 (-)
cwf19l2 cwf19l2 other upstream 1524514 27824605 ~ 27847548 (-)

Expression


Co-expression Network