cul3b (cul3,LOC104924156,LOC100710156,LOC107099750,LOC108240497,LOC104940878,LOC103474461,LOC108428259,LOC102194569,LOC101170875)


Basic Information

Item Value
gene id cul3b
gene name cul3,LOC104924156,LOC100710156,LOC107099750,LOC108240497,LOC104940878,LOC103474461,LOC108428259,LOC102194569,LOC101170875
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 26451380 ~ 26469896 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU26810
TaactacttgtttttttttatttattttcctttgttGTGCACTACCTAGTGGCTGCTAAACAAGGGGAGTCAGACCCGGAGAGGAAGGAGACGCGACAGAAAGTGGACGACGACAGAAAGCATGAGATCGAAGCAGCCATCGTTCGCATTATGAAGTCCAGAAAGAAGATGCAGCACAATGTTCTAGTAGCTGAGGTCACGCAGCAGTTACGAGCACGATTCCTCCCTAGCCCTGTAGTCATCAAGAAGCGCATTGAAGGACTCATTGAGAGGGAATATTTGGCACGAACACCGGAGGACCGCAAAGTGTACACTTATGTAGCATAAAACAATGAATTCAATGAAAGCTAACATCGAGTTGAGTGAAACAGAGCCTTGTGTTTTTTTGGACTGCAATGCATTTGAATGAACTTGGAAGTGCTTTCATCATTGATTCTGGGAAACACTGGGAAGCTTACATTTTCTTCCattaaaaatgtgtaaaaagaaaaataatgcaaaagATGGGGAAGTTTTCTAGCAATATTAGATTTCTTCTGCTGAGAGAAATGGAAGGAGGGGATCTAGTTTTGTACAAAATCATGTTTCTTGTGGCCTTTGGAGAGAATTGGGAGAGCCTGTTTGCGAATTAACTATGTGCTGTTGAGAACGAGCTTAAACATGTTAAAGCAAACGTGCGGCTACATGGAGACcaagaaaacatttgaattCACTCCCCTGTTTTAAATGTTGATGTCAACgtgttatgtttgtttttgtggcaCATTGATGGCTGTACAAGTTGACCGACACTTTTGGCCTTTTCCTCCCAGAGGATTTTAAATTTATAGAAGAGGACAAAGTGTTAACTGGTACAGACCTGGTTTACTACAGCAGTAAAACACATTGCGAGTACTGGAGAAAACATGAAGAGTGCTTaatttatgttgaaaatatGTCTGTTTTTTGAGGTTCTTTTTAATGTCTGAAATGAATTAAGTGCACCTCACATAGCTGAAATATTTAAtgccattttcaatgttttggccAGGTCTGAACTAGTGGTTGGAGAGGTTAAGAGCTGTAGCTTCACAGCATGCTTTTATCTAACGGATCAATCAGGGCAATAAGACACATGAAAGCTCCATATATGGTGTTTTGTCTCTCATGACACATATTTCACTTCAGGCCTGCTGTATGATTGGCCAAAAAAATTTTCTCCTCTCCGAATGGAAGGTTCCTTGTGGTGCAGCTTTcaaagcagattttttttttttgttttttttttttcattctcgACTGCATTTTCGAAAGGGTGGAACCAGTCTAGCACCATGTTCTAATGTGTACAAATTGTAAAATAATTATTGTACTCACTGCAAAGGTGGATTGTACAGGGCCTTGTTTTCATCATATTAAatgtagaataaaaaaaa
>TU26811
TaactacttgtttttttttatttattttcctttgttGTGCACTACCTAGTGGCTGCTAAACAAGGGGAGTCAGACCCGGAGAGGAAGGAGACGCGACAGAAAGTGGACGACGACAGAAAGCATGAGATCGAAGCAGCCATCGTTCGCATTATGAAGTCCAGAAAGAAGATGCAGCACAATGTTCTAGTAGCTGAGGTCACGCAGCAGTTACGAGCACGATTCCTCCCTAGCCCTGTAGTCATCAAGAAGCGCATTGAAGGACTCATTGAGAGGGAATATTTGGCACGAACACCGGAGGACCGCAAAGTGTACACTTATGTAGCATAAAACAATGAATTCAATGAAAGCTAACATCGAGTTGAGTGAAACAGAGCCTTGTGTTTTTTTGGACTGCAATGCATTTGAATGAACTTGGAAGTGCTTTCATCATTGATTCTGGGAAACACTGGGAAGCTTACATTTTCTTCCattaaaaatgtgtaaaaagaaaaataatgcaaaagATGGGGAAGTTTTCTAGCAATATTAGATTTCTTCTGCTGAGAGAAATGGAAGGAGGGGATCTAGTTTTGTACAAAATCATGTTTCTTGTGGCCTTTGGAGAGAATTGGGAGAGCCTGTTTGCGAATTAACTATGTGCTGTTGAGAACGAGCTTAAACATGTTAAAGCAAACGTGCGGCTACATGGAGACcaagaaaacatttgaattCACTCCCCTGTTTTAAATGTTGATGTCAACgtgttatgtttgtttttgtggcaCATTGATGGCTGTACAAGTTGACCGACACTTTTGGCCTTTTCCTCCCAGAGGATTTTAAATTTATAGAAGAGGACAAAGTGTTAACTGGTACAGACCTGGTTTACTACAGCAGTAAAACACATTGCGAGTACTGGAGAAAACATGAAGAGTGCTTaatttatgttgaaaatatGTCTGTTTTTTGAGGTTCTTTTTAATGTCTGAAATGAATTAAGTGCACCTCACATAGCTGAAATATTTAAtgccattttcaatgttttggccAGGTCTGAACTAGTGGTTGGAGAGGTTAAGAGCTGTAGCTTCACAGCATGCTTTTATCTAACGGATCAATCAGGGCAATAAGACACATGAAAGCTCCATATATGGTGTTTTGTCTCTCATGACACATATTTCACTTCAGGCCTGCTGTATGATTGGCCAAAAAAATTTTCTCCTCTCCGAATGGAAGGTTCCTTGTGGTGCAGCTTTcaaagcagattttttttttttgttttttttttttcattctcgACTGCATTTTCGAAAGGGTGGAACCAGTCTAGCACCATGTTCTAATGTGTACAAATTGTAAAATAATTATTGTACTCACTGCAAAGGTGGATTGTACAGGGCC
>XM_039788954.1
GAGCTCTGCGCAATGTGAACTGCAGGTAGTCCGCCATTGCTGTATGAAAAACTATCGGATTTGGCGTTTGGCTGTCAACAATAAACTTGCGGTGCCGGGACGCGGAGCTACGAGGTCGAGTGAAAGCTCGTCGGCTGCTCCATTAACCAGTAGTCACTCCCGTCCCTCCCTGAAGAATACTTTCATGTGAATACAGAGCCCACGGCCGAGGCAACCATGTCCAATCTCAGCAAAGGCGGCACCAAGAAGGACACCAAAATGAGGATACGGGCCTTTCCTATGACGATGGATGAGAAGTACGTCAACAATATCTGGGATCTTCTGAAAAATGCCATCCAGGAAATTCAGAGGAAGAACAACAGCGGCCTAAGCTTCGAGGAACTGTACAGGAACGCCTACACAATGGTGCTCCACAAACATGGAGAGAAGCTGTACACAGGTCTGCGGGAGGTCGTCACTGAACACCTTATCAACAAAGTAAGACTAACACAGATTGCAGAGCAACCGGATGTTAAGAGGAAGATGCATATAGTCTATGCTGACCAAGACATTACTtgtactttttttgtgtttgtctcaCAGGATCGGGTGTATGTACAGCAGAACAATGTAGAAAATGTCTACAACCTGGGTCTCATTATCTTTAGAGATCAAGTGGTTCGTTATGGCTGCATCAGAGACCACCTCCGACAGACCCTGCTGGACATGATCGCACGTGAGAGGAAAGGGGAGGTGGTGGACAGGGGGGCCATTAGAAATGCCTGCCAAATGTTAATGATCCTCGGCCTTGAAGGGAGATCTGTTTATGAAGAAGACTTTGAGGCACCGTTCTTAGAAATGTCTGCAGAATTTTTCCAGATGGAGAGCCAAAAGTTCCTTGCAGAAAATAGTGCCAGTGTGTACATAAAGAAGGTGGAAGCCAGAATCAATGAGGAGATTGAGCGGGTGATGCACTGCCTGGATAAATCTACAGAAGAGCCTATTGTCAaggtggtggaacgggagctcatctccaaacacatgaagacaatcgtAGAGATGGAGAACTCTGGCTTGGTCCACATGCTCAAAAACGGGAAGACAGACGATTTGGCGTGCATGTACAAGCTGTTCAGCAGGGTTCCCAATGGGCTGAAGACtatgtgtgagtgtatgagCTCATACCTGCGGGAGCAAGGAAAGGCTCTCGTgtcagaggagggagagggaaagaacCCTGTAGACTACATCCAGGGTTTGCTGGACCTGAAGTCACGTTTCGACCGGTTTCTCCAGGAGTCTTTTAATAATGACCGGCTCTTCAAACAGACTATTGCAGGCGACTTTGAGTACTTCCTTAACCTCAACTCTCGCTCGCCTGAGTACCTCTCACTCTTTATCGACGACAAACTGAAGAAAGGAGTAAAAGGGTTGACCGAGCAAGAGGTAGAGTCTATACTGGACAAGGCCATGGTGCTGTTCCGCTTCATGCAGGAGAAGGACGTGTTTGAGAGGTACTACAAGCAGCACCTCGCCCGCAGGCTGCTCACCAACAAGAGTGTCTCTGATGACTCTGAGAAGAACATGATCTCAAAGCTCAAGACCGAGTGCGGCTGTCAGTTCACCTCTAAACTGGAGGGCATGTTCCGGGATATGAGCATCTCCAACACCACCATGGATGAGTTTAGACAACATCTACAGACAACTGGGGTGTCACTTGGAGGGGTTGATCTCACTGTGAGAGTCCTGACCACGGGATACTGGCCAACACAATCGGCAACACCCAAGTGCAACATCCCCCCTTCACCGCGACATGCATTTGAAGTCTTTAGAAGGTTTTATCTTGGTAAGCACAGCGGCAGACAACTCACACTGCAGCACCATATGGGCTCTGCAGATCTAAACGCCACTTTCTACGGTCCAATCAAAAAGGAGGATGGGTCAGAGGTCGGAGTGGGAGGAGCCCAGGTTACCGGCTCCAACACCAGGAAGCACATCCTGCAGGTCTCCACCTTCCAGATGACCATCCTCATGCTTTTCAACAACAGAGACAAGTCCATATTTGAGGAGATCCAGCAGGAGACGGACATTCCAGAGAGGGAGCTTGTGCGAGCGCTGCAGTCTCTGGCCTGTGGGAAGCCCACTCAGAGAGTTCTCACCAAGGAGCCCAAGTCCAAGGAGATCGAGAATGGCCAtgtgtttcttgtttttttttatttattttcctttgttGTGCACTACCTAGTGGCTGCTAAACAAGGGGAGTCAGACCCGGAGAGGAAGGAGACGCGACAGAAAGTGGACGACGACAGAAAGCATGAGATCGAAGCAGCCATCGTTCGCATTATGAAGTCCAGAAAGAAGATGCAGCACAATGTTCTAGTAGCTGAGGTCACGCAGCAGTTACGAGCACGATTCCTCCCTAGCCCTGTAGTCATCAAGAAGCGCATTGAAGGACTCATTGAGAGGGAATATTTGGCACGAACACCGGAGGACCGCAAAGTGTACACTTATGTAGCATAAAACAATGAATTCAATGAAAGCTAACATCGAGTTGAGTGAAACAGAGCCTTGTGTTTTTTTGGACTGCAATGCATTTGAATGAACTTGGAAGTGCTTTCATCATTGATTCTGGGAAACACTGGGAAGCTTACATTTTCTTCCattaaaaatgtgtaaaaagaaaaataatgcaaaagATGGGGAAGTTTTCTAGCAATATTAGATTTCTTCTGCTGAGAGAAATGGAAGGAGGGGATCTAGTTTTGTACAAAATCATGTTTCTTGTGGCCTTTGGAGAGAATTGGGAGAGCCTGTTTGCGAATTAACTATGTGCTGTTGAGAACGAGCTTAAACATGTTAAAGCAAACGTGCGGCTACATGGAGACcaagaaaacatttgaattCACTCCCCTGTTTTAAATGTTGATGTCAACgtgttatgtttgtttttgtggcaCATTGATGGCTGTACAAGTTGACCGACACTTTTGGCCTTTTCCTCCCAGAGGATTTTAAATTTATAGAAGAGGACAAAGTGTTAACTGGTACAGACCTGGTTTACTACAGCAGTAAAACACATTGCGAGTACTGGAGAAAACATGAAGAGTGCTTaatttatgttgaaaatatGTCTGTTTTTTGAGGTTCTTTTTAATGTCTGAAATGAATTAAGTGCACCTCACATAGCTGAAATATTTAAtgccattttcaatgttttggccAGGTCTGAACTAGTGGTTGGAGAGGTTAAGAGCTGTAGCTTCACAGCATGCTTTTATCTAACGGATCAATCAGGGCAATAAGACACATGAAAGCTCCATATATGGTGTTTTGTCTCTCATGACACATATTTCACTTCAGGCCTGCTGTATGATTGGCCAAAAAAATTTTCTCCTCTCCGAATGGAAGGTTCCTTGTGGTGCAGCTTTcaaagcagattttttttttttgttttttttttttcattctcgACTGCATTTTCGAAAGGGTGGAACCAGTCTAGCACCATGTTCTAATGTGTACAAATTGTAAAATAATTATTGTACTCACTGCAAAGGTGGATTGTACAGGGCCTTGTTTTCATCATATTAAatgtagaataaaaaaaatgaaggga

Function

symbol description
cul3 Enables several functions, including Notch binding activity; POZ domain binding activity; and ubiquitin protein ligase binding activity. Contributes to ubiquitin-protein transferase activity. Involved in several processes, including COPII vesicle coating; positive regulation of cell cycle process; and protein ubiquitination. Acts upstream of or within anaphase-promoting complex-dependent catabolic process. Located in several cellular components, including microtubule cytoskeleton; nucleus; and sperm flagellum. Part of Cul3-RING ubiquitin ligase complex. Implicated in pseudohypoaldosteronism.

NR:

description
PREDICTED: cullin-3 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU26810 False 1415 lncRNA 0.36 2 26451388 26453733
TU26811 False 1380 lncRNA 0.45 2 26451423 26453733
XM_039788954.1 True 3598 mRNA 0.46 16 26451380 26469896

Neighbor

gene id symbol gene type direction distance location
gdpd1 gdpd1 coding downstream 103196 26337551 ~ 26348184 (-)
bcl7bb bcl7b,LOC102791254 coding downstream 189585 26259446 ~ 26261795 (-)
baz1b baz1b,LOC102789732 coding downstream 192364 26242881 ~ 26259016 (-)
LOC120572189 LOC103357875,LOC102300835,LOC102196867,LOC101475975 coding downstream 294835 26135814 ~ 26156545 (-)
dner dner coding downstream 412822 25986594 ~ 26038558 (-)
LOC120574272 pde2a coding upstream 1744 26471640 ~ 26663398 (-)
LOC120575574 arap1 coding upstream 213667 26683563 ~ 26744794 (-)
stard10 stard10 coding upstream 278362 26748258 ~ 26762729 (-)
inppl1a inppl1 coding upstream 349188 26819084 ~ 26847951 (-)
folr LOC102204051,LOC104968280,LOC102291363 coding upstream 382581 26852477 ~ 26856236 (-)
G19665 NA non-coding downstream 38806 26311617 ~ 26412574 (-)
G19685 NA non-coding downstream 42632 26407288 ~ 26408748 (-)
G19660 NA non-coding downstream 140709 26307737 ~ 26310671 (-)
G19663 hip1 non-coding downstream 151289 26296499 ~ 26300091 (-)
G19566 rnf7 non-coding downstream 280812 26168674 ~ 26170568 (-)
G19700 NA non-coding upstream 17962 26487858 ~ 26559669 (-)
G19788 NA non-coding upstream 389887 26859783 ~ 26861307 (-)
G19811 NA non-coding upstream 435277 26905173 ~ 26908000 (-)
G19832 NA non-coding upstream 543752 27013648 ~ 27021216 (-)
G19851 NA non-coding upstream 651875 27121771 ~ 27122407 (-)
LOC120570434 fam124b other downstream 5445 26434281 ~ 26445935 (-)
LOC120570356 ypelc,ypel2,LOC106931471,LOC106940241,LOC101067200,LOC107659943,LOC106603438,LOC107599611,LOC101078269,LOC104940871 other downstream 116661 26307064 ~ 26334719 (-)
trip12 trip12 other downstream 361678 26041295 ~ 26089702 (-)
G19270 ptx3 other downstream 2198467 24248031 ~ 24252913 (-)
G19140 gmps,LOC102797084 other downstream 2623426 23823821 ~ 23827954 (-)
G19840 NA other upstream 618710 27088606 ~ 27089064 (-)
cwf19l2 cwf19l2 other upstream 1354709 27824605 ~ 27847548 (-)
G20417 scarf1 other upstream 2977274 29447170 ~ 29448655 (-)
im:7138535 NA other upstream 3497533 29967429 ~ 29972350 (-)
rnf26 rnf26 other upstream 3617839 30087735 ~ 30091711 (-)

Expression


Co-expression Network