G19788


Basic Information

Item Value
gene id G19788
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 26859783 ~ 26861307 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU26982
TTtcataaaaagtatttaatttaGTACAAAAAAGCAAGACTTTTGTTCATTTTAGTACAAATAATCAAAGCCTTGGTAAGCAATCCTTTAAGGAAAACATGACAGTATTCAAACGGACACTATGTATTCATATTTAAATTGACGTTCTTCAAAAGTAATGGCTGCTCTTACCTTTAACAtagttaaaaaaatatcaaaatgtattttaataacAACTGATGCATTGTCCGaacataatactatttcacaggCTTTCATGCAGTTTTAACTGGTAGTATGATATCTGTAAAAAAAGATTAGCAGCATACACAACACTATGAAACAGAATCTTACTATGTGATGAAGTATCTGTCAGTCTCCTTTATAGGTAACAAATTATTTAGCTGACTTAACTGTTGTTCATGCTCAGTCAGCTGAGAAGTGGCACATGACTGAAGATATGACAAGGTCAAAGTGTAAATGAGGATCACGGGGCCGATGCCTACTGCTgccactgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtccgaccGTTATAGGACAGCAGTGTTCagtaaacagtgtgtgtgtgtgtgtgtacgccaGGTAGCAACACTCACAGTGATGTCCAACAACATCAAGGGCCTTCAAAAGCCAACTGCTGCCTGAAATGAGACACTTTGTGCTGGATATATCCAAACTCCCTCTGTAGGACATCATGATACAAGCTTTGATTCACCTATATTCTTTTCCTGTTtacacaaatataaaaatatatctgTGTCACAAACTGAAGGGGCAGCAGTCGTGTTTTAAGTGGGGAGTAACAATCCAGTGCCAGACAGCTTGATGGAGATTAAAATTGTCTTTTGTCTTAAATCATCcattggtcttggtcttggtctggTCCCTCCATGTCCACCTCGTTGATCTCGCCGTCATCAGGTGACTCGTTGTAGTCATTCATCTCATCCATGTCCTGCATGTCTTCTTCATCTTCCGAGTCTTCCTCGCTGTCCTCCTCATCCTCGtcatcctcttcttcttcttcatcataTCCCGCCTGCGCCACAGTAAAGCCAGATGACTTAAATGGAGGGAACCATGTTACCAGTGTAGGTTTCATACTGAAGCATGGTGAAACTCAAGAGCAACATTTTCAGTTAAAATGCATCTGTCGATTATATCTTAATGGCAACACATTACCTCATAAATAGGTTTCCCAATCGGCATCAGGTTGTTGT

Function

NR:

description
vesicle-fusing ATPase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU26982 True 1224 lncRNA 0.49 2 26859783 26861307

Neighbor

gene id symbol gene type direction distance location
folr LOC102204051,LOC104968280,LOC102291363 coding downstream 3547 26852477 ~ 26856236 (-)
inppl1a inppl1 coding downstream 11832 26819084 ~ 26847951 (-)
stard10 stard10 coding downstream 97054 26748258 ~ 26762729 (-)
LOC120575574 arap1 coding downstream 114989 26683563 ~ 26744794 (-)
LOC120574272 pde2a coding downstream 196385 26471640 ~ 26663398 (-)
tomt tomt,LOC104968284,LOC102290535,LOC100705770,LOC103372127,LOC106927839 coding upstream 500 26861807 ~ 26864008 (-)
sfrp2l LOC104968278,LOC103371952,LOC103378548 coding upstream 3229 26864536 ~ 26869559 (-)
lrrc51 lrrc51,LOC100706293,LOC102797274,LOC102204925,LOC102290838,LOC104968276 coding upstream 11943 26873250 ~ 26877133 (-)
naalad2 folh1b coding upstream 58328 26919635 ~ 26938436 (-)
tyr tyr coding upstream 105037 26966344 ~ 26972566 (-)
G19700 NA non-coding downstream 300114 26487858 ~ 26559669 (-)
G19665 NA non-coding downstream 447209 26311617 ~ 26412574 (-)
G19685 NA non-coding downstream 451035 26407288 ~ 26408748 (-)
G19660 NA non-coding downstream 549112 26307737 ~ 26310671 (-)
G19663 hip1 non-coding downstream 559692 26296499 ~ 26300091 (-)
G19811 NA non-coding upstream 43866 26905173 ~ 26908000 (-)
G19832 NA non-coding upstream 152341 27013648 ~ 27021216 (-)
G19851 NA non-coding upstream 260464 27121771 ~ 27122407 (-)
G19874 NA non-coding upstream 356435 27217742 ~ 27218190 (-)
G19876 NA non-coding upstream 365944 27227251 ~ 27227489 (-)
cul3b cul3,LOC104924156,LOC100710156,LOC107099750,LOC108240497,LOC104940878,LOC103474461,LOC108428259,LOC102194569,LOC101170875 other downstream 389887 26451380 ~ 26469896 (-)
LOC120570434 fam124b other downstream 413848 26434281 ~ 26445935 (-)
LOC120570356 ypelc,ypel2,LOC106931471,LOC106940241,LOC101067200,LOC107659943,LOC106603438,LOC107599611,LOC101078269,LOC104940871 other downstream 525064 26307064 ~ 26334719 (-)
trip12 trip12 other downstream 770081 26041295 ~ 26089702 (-)
G19270 ptx3 other downstream 2606870 24248031 ~ 24252913 (-)
G19840 NA other upstream 227299 27088606 ~ 27089064 (-)
cwf19l2 cwf19l2 other upstream 963298 27824605 ~ 27847548 (-)
G20417 scarf1 other upstream 2585863 29447170 ~ 29448655 (-)
im:7138535 NA other upstream 3106122 29967429 ~ 29972350 (-)
rnf26 rnf26 other upstream 3226428 30087735 ~ 30091711 (-)

Expression


Co-expression Network