G19916


Basic Information

Item Value
gene id G19916
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 27510793 ~ 27539558 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU27147
gagagacagaggagaagaaGCATGGGAACGGGagtgagaggaagagaaaaacaaagagtTCATAGAGAACAGCAAGGCAAGGGAAAACAGTGAAataagaagagaggaaagaggagaaagcTGAGGAAAGCGTGCAGGGAAaagtggaggagaggagaaatgaGAGTCAGGAGCAGCAGAGGAAAAACgtgaaaggaaagagaaaattaAGAAAGGACGGCTATACTGAGAAGGAAGCACACACAGGAGAGTGAAGAAGAGACAAAAGAGCAAATCCATGCACTTTTAGTGAGGTAACACTGACCTTCCTGAGGAATTGGAGCCAAGAAGATGAACTTTCACAGACAGCATGG

Function

GO:

id name namespace
GO:0050877 nervous system process biological_process
GO:0050953 sensory perception of light stimulus biological_process
GO:0007600 sensory perception biological_process
GO:0007601 visual perception biological_process
GO:0003008 system process biological_process

KEGG:

id description
ko04744 Phototransduction

RNA

RNA id representative length rna type GC content exon number start site end site
TU27147 True 353 lncRNA 0.38 2 27510793 27539558

Neighbor

gene id symbol gene type direction distance location
pdgfd pdgfd coding downstream 30727 27407761 ~ 27480066 (-)
LOC120553392 NA coding downstream 253797 27247233 ~ 27256996 (-)
fzd4 fzd4 coding downstream 340415 27160443 ~ 27170378 (-)
tyr tyr coding downstream 538227 26966344 ~ 26972566 (-)
naalad2 folh1b coding downstream 572357 26919635 ~ 26938436 (-)
msantd4 msantd4 coding upstream 185876 27725434 ~ 27731504 (-)
gucy1a2 gucy1a2,LOC102775648 coding upstream 232410 27771968 ~ 27820113 (-)
alkbh8 alkbh8 coding upstream 310466 27850024 ~ 27864523 (-)
kbtbd3 kbtbd3 coding upstream 332857 27872415 ~ 27880814 (-)
p2ry2.1 p2ry2 coding upstream 501891 28041449 ~ 28046085 (-)
G19915 NA non-coding downstream 24316 27486185 ~ 27486477 (-)
G19913 NA non-coding downstream 104247 27405393 ~ 27406546 (-)
G19876 NA non-coding downstream 283304 27227251 ~ 27227489 (-)
G19874 NA non-coding downstream 292603 27217742 ~ 27218190 (-)
G19851 NA non-coding downstream 388386 27121771 ~ 27122407 (-)
G19963 NA non-coding upstream 203657 27743215 ~ 27743465 (-)
G19967 NA non-coding upstream 205727 27745285 ~ 27745574 (-)
G20012 NA non-coding upstream 229943 27769501 ~ 27771897 (-)
G20019 NA non-coding upstream 329036 27868594 ~ 27913558 (-)
G20049 NA non-coding upstream 444711 27984269 ~ 28006577 (-)
G19840 NA other downstream 421729 27088606 ~ 27089064 (-)
cul3b cul3,LOC104924156,LOC100710156,LOC107099750,LOC108240497,LOC104940878,LOC103474461,LOC108428259,LOC102194569,LOC101170875 other downstream 1040897 26451380 ~ 26469896 (-)
LOC120570434 fam124b other downstream 1064858 26434281 ~ 26445935 (-)
LOC120570356 ypelc,ypel2,LOC106931471,LOC106940241,LOC101067200,LOC107659943,LOC106603438,LOC107599611,LOC101078269,LOC104940871 other downstream 1176074 26307064 ~ 26334719 (-)
trip12 trip12 other downstream 1421091 26041295 ~ 26089702 (-)
cwf19l2 cwf19l2 other upstream 285047 27824605 ~ 27847548 (-)
G20417 scarf1 other upstream 1907612 29447170 ~ 29448655 (-)
im:7138535 NA other upstream 2427871 29967429 ~ 29972350 (-)
rnf26 rnf26 other upstream 2548177 30087735 ~ 30091711 (-)
cbl cbl other upstream 2615335 30154893 ~ 30198071 (-)

Expression


Co-expression Network