G20012


Basic Information

Item Value
gene id G20012
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 27769501 ~ 27771897 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU27257
aacaaGACAACAATACCACCTATAGATAAATCTAATCAATCAAAGACTTGAGAACATAGTTTTTAGCATACAAATATCAGGAATTGTAACACGATAAAAACATGTGTATTAACTCAGAATTAGGTGCCATTGTTTAGTGGGTCAAGTGGCAAGtcaaaatgtaaattattattatttgttttttctaaaCCTGTTAGAAAGCAGCATAatgttgtttacattttgttgcTTTGTGGTAACAAAGCCAAAACACTTCCTGAGACCAAAAGGTCTTCTTTACAATTCATGTTTTCTGTGAGAACCAGAGTCTTACAGTACCTGGGACATACATCCTATATATGTACACATCAGTGGTTCAAAGGATTTGCCCTTTTCTCTTTATAGTAATGTTGACATGCCTGCCTAACAAAAGTCCAATAAGTTCAATATAATTGCCAAATAAACAGTAGCAATGTGATGTTACTCTTGGAAGAATATGTATGGCAACACAGCCTCATAGGGTACAATATCCACAGTAAGAATACACTCCAGTCCAGGAACCAAGTAGATATAATTAGATACATATAATTTGATGAGGAAGTGTCAATTAATGATGGTCAATTATGACTACAGTACAATGCTAATGATGATAGACATGGTTGTTAGTTTATAGCTGACTAGCTGCTATTGCAATCCCAGAGTACTGTGTTGGACCCTACATAAAAGTATGCAGGTGCAAGATGTTAAAGCCACAATGGGGAAAGATCTGTGCATGGACACTACTATCACATTATATCCagtgataaaaaaaaccaaCTGAATTTCCTTAGAGTCCTTGTAAGGTTAGTGTATTTGACAGTTGTGTCATTGAGCCTGGGGTAATTTTTCCCAAGGACAGGCTTTCACATATAGAGACGCATAAGCACTCTCTCTACAATGCCTACATGCATTAATGTTtacttaataaatatattgtaGCACAAATGTAGTGCAGGTGTCATTTACATTTAACTTCAGCAGCGCCTGAATTCTACATCTAGGTTAAATTAAGGACATTACACTAGCGTTACACCCACGCAACTTATGTCTAACGCTCATGTCTCCAAGTCTGTAAATTTCTCAGCATAATATTAAAGGTTTGGTCCGACCTTACATGTCTTGCTGTTGTGATGCCGAGGGGCTGCAGGCACTGGTTCTCCACAGTGTTGTCACTAACGGACCATTATACTGCAGTGCATACTGTAGGTCACTAACTCATACACAGGCATACATCACAGTTACAGTTTTAATTCAACTGAGCTGTACTGCACAAGCTTTGTCTAACAATGAACATGAATAAATGTCATGAGTCTGAGGTAAATGTGGGATggtcaagtcaaagtcaaatacATCCATAACTCCAGCAACTGTTGTGTGTCTGCTTGCCTGTGTATGTCAAACAATATAAGAACATATTGAGTTTGCAAATGTACAAACATAATAATTTGTTAATAAAGGTATTTTGTACCTGTAACAAATCTGTACAATTTAGATCTATTTAatatataaaactgaaaaatggaaATTGTAATAAAATTATATAGCAGATTTGTTGTGGTATAATTTCTAAAATGATTTGACATTATCACAATTTTCACTGCTTTGTTGTCCGTTTTCTATTTCAGATACTTTATGTCAGTATATGTGCCATCTAAAGCTAGGCTGGTTTTCACAACATGCCAGTGTCCCACAAAACCTCCCCACCCTaaagtagtgtttttttttcgatgacactattttattcatttcattCTACATCACATGTTGAATGGTTTTCTTAAATGAtggattttttaaaacattttcttcaACTGACTGAGCATGACACTGTCCTTTTTATTGAAGAATAAAATTGCTTAACATATGTTTTTTGCAGGACATTGTTGTAAACTGTCTTGTTGCCAAGATCAACTTCATCCCCACTGACTTGCAGTACAACAGGTCTAAGCTAATGGGAAACTGGTCCCTATTTGTTGTAACATTAGCAAACATGGTGGATGCTTGTCATTTCATGTCCAGggtccataaaaaaaaacagcactccTAAAGGATGCACATTATTCCACCGAACTCCAATCTATAAACCTTCAACCACATGAGAATAGTAGCTTCCATGACATTTGTTCACCAGCTCAGTTCAAAACTAATAAAACACGTGACGGTTAACAATTCTGGTCAGTGTTTTTTACTGTGATGTCATGTTGTAAACATGCAGTACAGAGTTGACCCTGGACATGAACTCTGTTTAACCCTGTTGTTAGAATCAGGTGTGTATGTGGAAGGCCTGTAAAGCTGTTAGTTTCTGACTGACATTAAGGGCACATATTCTGTCTTatattatgtaaataaataaaaacaccaagTATCTTTAATAAGGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU27257 True 2397 lncRNA 0.36 1 27769501 27771897

Neighbor

gene id symbol gene type direction distance location
msantd4 msantd4 coding downstream 37997 27725434 ~ 27731504 (-)
pdgfd pdgfd coding downstream 289435 27407761 ~ 27480066 (-)
LOC120553392 NA coding downstream 512505 27247233 ~ 27256996 (-)
fzd4 fzd4 coding downstream 599123 27160443 ~ 27170378 (-)
tyr tyr coding downstream 796935 26966344 ~ 26972566 (-)
gucy1a2 gucy1a2,LOC102775648 coding upstream 71 27771968 ~ 27820113 (-)
alkbh8 alkbh8 coding upstream 78127 27850024 ~ 27864523 (-)
kbtbd3 kbtbd3 coding upstream 100518 27872415 ~ 27880814 (-)
p2ry2.1 p2ry2 coding upstream 269552 28041449 ~ 28046085 (-)
trnam-cau_1 NA coding upstream 294428 28066325 ~ 28066397 (-)
G19967 NA non-coding downstream 23927 27745285 ~ 27745574 (-)
G19963 NA non-coding downstream 26036 27743215 ~ 27743465 (-)
G19916 NA non-coding downstream 229943 27510793 ~ 27539558 (-)
G19915 NA non-coding downstream 283024 27486185 ~ 27486477 (-)
G19913 NA non-coding downstream 362955 27405393 ~ 27406546 (-)
G20019 NA non-coding upstream 96697 27868594 ~ 27913558 (-)
G20049 NA non-coding upstream 212372 27984269 ~ 28006577 (-)
G20056 NA non-coding upstream 235144 28007041 ~ 28007474 (-)
G20090 NA non-coding upstream 337865 28109762 ~ 28114304 (-)
G20091 NA non-coding upstream 344003 28115900 ~ 28116767 (-)
G19840 NA other downstream 680437 27088606 ~ 27089064 (-)
cul3b cul3,LOC104924156,LOC100710156,LOC107099750,LOC108240497,LOC104940878,LOC103474461,LOC108428259,LOC102194569,LOC101170875 other downstream 1299605 26451380 ~ 26469896 (-)
LOC120570434 fam124b other downstream 1323566 26434281 ~ 26445935 (-)
LOC120570356 ypelc,ypel2,LOC106931471,LOC106940241,LOC101067200,LOC107659943,LOC106603438,LOC107599611,LOC101078269,LOC104940871 other downstream 1434782 26307064 ~ 26334719 (-)
trip12 trip12 other downstream 1679799 26041295 ~ 26089702 (-)
cwf19l2 cwf19l2 other upstream 52708 27824605 ~ 27847548 (-)
G20417 scarf1 other upstream 1675273 29447170 ~ 29448655 (-)
im:7138535 NA other upstream 2195532 29967429 ~ 29972350 (-)
rnf26 rnf26 other upstream 2315838 30087735 ~ 30091711 (-)
cbl cbl other upstream 2382996 30154893 ~ 30198071 (-)

Expression


Co-expression Network