cwf19l2 (cwf19l2)


Basic Information

Item Value
gene id cwf19l2
gene name cwf19l2
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 27824605 ~ 27847548 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU27264
CTTCCATTTTAGTGCACTCATCAGCTGAGAGAGCACTCACACTCAGATGTGAGTGATAGTGATGTTAATCCTTCCAATCCGTGTTGTTATAGAAGACTTTTGGTTTGTCTGGAAAACCATACGACTGCACCAAGACTGAGGGCTAGCTGGACACACTCACAGAAAGGTGTACACTTTGCCGACGAGcgaagatcacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacttttgtacCTACCA
>XM_039787697.1
TTTACGACACTTAACACAAACATTGACGACAGTGTCATGGCGGCGCACGGACTCAGTTTTGAGAGTTCGAGCAACAtcgaagaaagaaagaatagtaAACGACATGCAAGGCAAGAGGCGATAGAAAAGGCCAAGCAGCAGTATGAGAAGGACgagaggaggaaggagctgAAGAGGCAGAGAGGGGAGGATACTTGGATGCTCCCTGAGATCAACCAGAGACTGCAGGAGATAGAGGACGAGGGCTCTGTAAAGagcaagaagaagaaagagaagaaatccaaaaagaaaaaggagaaaaagaagaaggccaagaaggagaaaaagacaGCAGAAGATGGCTCTAATGACAGCTCAGAGGGCTCAGGGGATGAGTGGGTTGAGGCTCACACTCAGACACAAGCTACTAAAGCGTGGCAGGTTCCTGATGCGTCCAAGCCTTCAGAGAGCAACCGCAGCCCAGCACAGAATATCGAGAGAGACGAATGGATGACCTTTGACTTTCTGGCAATGAGAACCACGTCCACATCAGAGAAGAGGGCCGAGAAAGAACGactgaaagaggaagagagggcaAAGGCTGAGGCCATTGAAcagGCTGGTTTGCACAAATTGGAGCTAAACCCGTACTGGAAAGATGGAGGAACTGGTCTGCCCCCAGAGAAGATGGCTGGCCCTGCAGCAAAGAAAGGAGGCCCAGTCGTGAATGATGCAGGTCTGGGCTGGCTGAGGAAGAGCTACCAAAGAATGCAGGAGCAGGCAGAAAGGCAGCAGCGCAGCCTCAATGATGTGGTGGCCGAGAGATACGGATCAATGGAAGAATTTCAGCAAAAACTTGCAGATGCTGAGAAAGCTGTGTACGGacagagcagaggaggagaaggagacagaACAGCGAGAGGCgggtggaggagaggagaggatgaggCCAGAGAGCGATGGAGGAGAAAAGATGGAGATGGAGCAGAGAGAGATCGATGGAGAAGAAATGAGAGGGAAAGAGATTCATCacccacagacagagagagataccatgctgggagaggagaggatcgAGAAAGGGGAGGATATCGaggcagagaggaagacagaggtCGAGACGGAGACAGGTCTAGAGAGAAggatagagagagggacagagacggAGACAGGTttagagagagggacagagacggtgatagagacagagagaaagatagaggacgagacagagagagagatcgaggcggtgacagagaaagagataaTGAAAGAGACCGAGATGGGgacagagaccgagagagagataGGGATAGTGAGAGAATAAGAGAAAGTGCTGCATCATCATCTGGGCAGAACTGGAGTCAACGTTCTCCCTCTCTTGGGTCACTTAAAAGTCGCTTCCTCAAACCCTCAGAGGATGACAGTGGTGAAGAGCGCCGTCCTCCTCCAGCACGGCCATCCAAAGGATTCCTGAAACCAAGCTCTGACGATGAAGACTCTGGTCCAAGTAATACCAGCATGCCATCCTGGAAGAAGAGCAGCAATCCAGCCCGTGAATCTGCCAGCTTTGAAAAACCACAACAGGAGAAAGATCCTGGGAAAACTGTGACTGCTATTCAAGATGTTCTGCGTGGCGATAAAGCCGCTGCGACGACATCAAGGAGTGAGAGTGACagtgaggaagaagaggaggaggagcttcCACTGCtgtcagaggaggagatgaacAAACTTGGAGCCAAACTGGTGAAAGCAGAGATTATGGGTAACACGGCCATGGTCGAGAAGCTGAAATCCCAGCTGGACGCAGCACACAAGGCCAAAGAGAGCCACATCGCACGAAAGAAGCTACTAGAAACAGCCAAGTTAAAGCAGgtcACAGGTCACTCTGGTGAGGACCAGGAAATCCTGCTGTTCAGAACGGACCAATCAGGTCGCGCCTGGCCAGTCAGTGCCCCCTCTGGACCCCAGGAGCCCCACGGAGGACGACGGAAGAAGAAAGCGATTGAGACCCATGTTGACGGGGAGCGTGTGCGCTACTTCCAGGATGATGACAATGTGGGTCTGAAGGAGATGGTGAGGAGGGAGAAGATGAGCTCTGCACAGGATCAGAACGCCCTCTACTCTCGCATGGCTGCCAAGATGATGGGGAAGACAGACGGTGACAACTACACACTGGATGACATGTTTGTGTCCGGTGCAGCGCAGCGGGAGGgcgaggggagggaggaggagcgGATGAGGAGCAGAGCCATTGGGGAGAATAGGAGGCTGGCTGCCTCCATGGAGAAATGCCAGCGGTGCTTCAGCAGCCAAGAGCTCCAGAAGCACCTCATAGTGGCAATAGGGAGCAAGGTGTACCTGAGCCTGCCTGCGGGAGTGTCGATGACAGAGGGCCACTGTCACATCTGTCCTCTCCAGCATCACTGCTCTGCCACCGGATTGGATGAGGATGTCTGGTCAGAAATGCAGCTGTTCCGGCGTACTTTGGTGCGAATGTTTGAGTCCCAAGAGCTGGACTGTGTGTTCATGGAAACACACATGAACCCACGCAAAAGACATCACCTGGTCCTGGAGTGTATCCCACTACCGCAAGAACTGGGTGATATGGCACCCATATACTTtaagAAAGCTATCATGGAGTGTGATGAGGAATGGGCCATGAACAAGAAGGTCGTCGACCTCTCTTCGAAAGACATCCGCCATGCTGTTCCTAGAGGTCTGCCCTACTTTGCTGTAGACTTTGGACTCCAGGGAGGTTTTGCTCATGTCATTGAAAATGAACAGAAGTTCCCCCATTACTTCGGCAAGGAAGTGGTAGGAGGCATGATGGACTTGGAGCCGCGACGTTGGAGAAAGTCAATTAGAGAGAATTTTGATGACCAGAGGAAAAAGGTCCTACAGTTTGCCCAGTGGTGGAAACCATACGACTGCACAAAGACTGAGGGCTAGCTGGACACACTCACAGAAAGGTGTACACTTTGCCGACGAGTGaagatctacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacactcactgtatATGCAGAAATATATAGAGGCCTATTTCCGACATGAGGAGACTCCAGACAACTTTATAAACACACGGAAAGCAGGCTGTGATTATTTATGTAACCTGTATATTATCATTTGGAAGTTACGCCAGATTCATCCCCACTAAGGCTGTCCTGTCCAAATTAGAAGACTGGGGTAAAATCCTctgcaatgtttaaaaaaaaaaagaagtcataatTCTTCCATTTTGGTGCACTCATCAGCTGAGAGAGCACTCACACTCAGATGTGAGCGAGAGTGATGTTAATCCTTCCAATCCGTGTTGTTATAGAAGACTTTTGGTTTGTCTGGAAAACCATACGACTGCACCAAGACTGAGGGCTAGCTGGACACACTCACAGAAAGGTGTACACTTTGCCGACGAGcgaagatcacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacttttgtacCTACCAATTCTGAATTTGATGTAAAATTCCTATTAGAAGTTATGTGAGAACATTTttactcaaaataaaaaaatacgaAAAAATGA
>XM_039787706.1
TTTACGACACTTAACACAAACATTGACGACAGTGTCATGGCGGCGCACGGACTCAGTTTTGAGAGTTCGAGCAACAtcgaagaaagaaagaatagtaAACGACATGCAAGGCAAGAGGCGATAGAAAAGGCCAAGCAGCAGTATGAGAAGGACgagaggaggaaggagctgAAGAGGCAGAGAGGGGAGGATACTTGGATGCTCCCTGAGATCAACCAGAGACTGCAGGAGATAGAGGACGAGGGCTCTGTAAAGagcaagaagaagaaagagaagaaatccaaaaagaaaaaggagaaaaagaagaaggccaagaaggagaaaaagacaGCAGAAGATGGCTCTAATGACAGCTCAGAGGGCTCAGGGGATGAGTGGGTTGAGGCTCACACTCAGACACAAGCTACTAAAGCGTGGCAGGTTCCTGATGCGTCCAAGCCTTCAGAGAGCAACCGCAGCCCAGCACAGAATATCGAGAGAGACGAATGGATGACCTTTGACTTTCTGGCAATGAGAACCACGTCCACATCAGAGAAGAGGGCCGAGAAAGAACGactgaaagaggaagagagggcaAAGGCTGAGGCCATTGAAcagGCTGGTTTGCACAAATTGGAGCTAAACCCGTACTGGAAAGATGGAGGAACTGGTCTGCCCCCAGAGAAGATGGCTGGCCCTGCAGCAAAGAAAGGAGGCCCAGTCGTGAATGATGCAGGTCTGGGCTGGCTGAGGAAGAGCTACCAAAGAATGCAGGAGCAGGCAGAAAGGCAGCAGCGCAGCCTCAATGATGTGGTGGCCGAGAGATACGGATCAATGGAAGAATTTCAGCAAAAACTTGCAGATGCTGAGAAAGCTGTGTACGGacagagcagaggaggagaaggagacagaACAGCGAGAGGCgggtggaggagaggagaggatgaggCCAGAGAGCGATGGAGGAGAAAAGATGGAGATGGAGCAGAGAGAGATCGATGGAGAAGAAATGAGAGGGAAAGAGATTCATCacccacagacagagagagataccatgctgggagaggagaggatcgAGAAAGGGGAGGATATCGaggcagagaggaagacagaggtCGAGACGGAGACAGGTCTAGAGAGAAggatagagagagggacagagacggAGACAGGTttagagagagggacagagacggtgatagagacagagagaaagatagaggacgagacagagagagagatcgaggcggtgacagagaaagagataaTGAAAGAGACCGAGATGGGgacagagaccgagagagagataGGGATAGTGAGAGAATAAGAGAAAGTGCTGCATCATCATCTGGGCAGAACTGGAGTCAACGTTCTCCCTCTCTTGGGTCACTTAAAAGTCGCTTCCTCAAACCCTCAGAGGATGACAGTGGTGAAGAGCGCCGTCCTCCTCCAGCACGGCCATCCAAAGGATTCCTGAAACCAAGCTCTGACGATGAAGACTCTGGTCCAAGTAATACCAGCATGCCATCCTGGAAGAAGAGCAGCAATCCAGCCCGTGAATCTGCCAGCTTTGAAAAACCACAACAGGAGAAAGATCCTGGGAAAACTGTGACTGCTATTCAAGATGTTCTGCGTGGCGATAAAGCCGCTGCGACGACATCAAGGAGTGAGAGTGACagtgaggaagaagaggaggaggagcttcCACTGCtgtcagaggaggagatgaacAAACTTGGAGCCAAACTGGTGAAAGCAGAGATTATGGGTAACACGGCCATGGTCGAGAAGCTGAAATCCCAGCTGGACGCAGCACACAAGGCCAAAGAGAGCCACATCGCACGAAAGAAGCTACTAGAAACAGCCAAGTTAAAGCAGgtcACAGGTCACTCTGGTGAGGACCAGGAAATCCTGCTGTTCAGAACGGACCAATCAGGTCGCGCCTGGCCAGTCAGTGCCCCCTCTGGACCCCAGGAGCCCCACGGAGGACGACGGAAGAAGAAAGCGATTGAGACCCATGTTGACGGGGAGCGTGTGCGCTACTTCCAGGATGATGACAATGTGGGTCTGAAGGAGATGGTGAGGAGGGAGAAGATGAGCTCTGCACAGGATCAGAACGCCCTCTACTCTCGCATGGCTGCCAAGATGATGGGGAAGACAGACGGTGACAACTACACACTGGATGACATGTTTGTGTCCGGTGCAGCGCAGCGGGAGGgcgaggggagggaggaggagcgGATGAGGAGCAGAGCCATTGGGGAGAATAGGAGGCTGGCTGCCTCCATGGAGAAATGCCAGCGGTGCTTCAGCAGCCAAGAGCTCCAGAAGCACCTCATAGTGGCAATAGGGAGCAAGGTGTACCTGAGCCTGCCTGCGGGAGTGTCGATGACAGAGGGCCACTGTCACATCTGTCCTCTCCAGCATCACTGCTCTGCCACCGGATTGGATGAGGATGTCTGGTCAGAAATGCAGCTGTTCCGGCGTACTTTGGTGCGAATGTTTGAGTCCCAAGAGCTGGACTGTGTGTTCATGGAAACACACATGAACCCACGCAAAAGACATCACCTGGTCCTGGAGTGTATCCCACTACCGCAAGAACTGGGTGATATGGCACCCATATACTTtaagAAAGCTATCATGGAGTGTGATGAGGAATGGGCCATGAACAAGAAGGTCGTCGACCTCTCTTCGAAAGACATCCGCCATGCTGTTCCTAGAGGTCTGCCCTACTTTGCTGTAGACTTTGGACTCCAGGGAGGTTTTGCTCATGTCATTGAAAATGAACAGAAGTTCCCCCATTACTTCGGCAAGGAAGTGGTAGGAGGCATGATGGACTTGGAGCCGCGACGTTGGAGAAAGTCAATTAGAGAGAATTTTGATGACCAGAGGAAAAAGGTCCTACAGTTTGCCCAGTGGTGGAAACCATACGACTGCACAAAGACTGAGGGCTAGCTGGACACACTCACAGAAAGGTGTACACTTTGCCGACGAGcgaagatcacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacttttgtacCTACCAATTCTGAATTTGATGTAAAATTCCTATTAGAAGTTATGTGAGAACATTTttactcaaaataaaaaaatacgaAAAAATGA

Function

symbol description
cwf19l2 Predicted to be involved in mRNA splicing, via spliceosome. Predicted to be part of post-mRNA release spliceosomal complex. Orthologous to human CWF19L2 (CWF19 like cell cycle control factor 2).

NR:

description
CWF19-like protein 2

GO: NA

KEGG:

id description
K24940 CWF19L2; CWF19-like protein 2

RNA

RNA id representative length rna type GC content exon number start site end site
TU27264 False 268 lncRNA 0.39 2 27824685 27834201
XM_039787697.1 True 3621 mRNA 0.50 19 27824605 27847548
XM_039787706.1 False 3136 mRNA 0.51 20 27824605 27847548

Neighbor

gene id symbol gene type direction distance location
gucy1a2 gucy1a2,LOC102775648 coding downstream 4492 27771968 ~ 27820113 (-)
msantd4 msantd4 coding downstream 93101 27725434 ~ 27731504 (-)
pdgfd pdgfd coding downstream 344539 27407761 ~ 27480066 (-)
LOC120553392 NA coding downstream 567609 27247233 ~ 27256996 (-)
fzd4 fzd4 coding downstream 654227 27160443 ~ 27170378 (-)
alkbh8 alkbh8 coding upstream 2476 27850024 ~ 27864523 (-)
kbtbd3 kbtbd3 coding upstream 24867 27872415 ~ 27880814 (-)
p2ry2.1 p2ry2 coding upstream 193901 28041449 ~ 28046085 (-)
trnam-cau_1 NA coding upstream 218777 28066325 ~ 28066397 (-)
yif1b yif1b coding upstream 293995 28141543 ~ 28147451 (-)
G20012 NA non-coding downstream 52708 27769501 ~ 27771897 (-)
G19967 NA non-coding downstream 79031 27745285 ~ 27745574 (-)
G19963 NA non-coding downstream 81140 27743215 ~ 27743465 (-)
G19916 NA non-coding downstream 285047 27510793 ~ 27539558 (-)
G19915 NA non-coding downstream 338128 27486185 ~ 27486477 (-)
G20019 NA non-coding upstream 21046 27868594 ~ 27913558 (-)
G20049 NA non-coding upstream 136721 27984269 ~ 28006577 (-)
G20056 NA non-coding upstream 159493 28007041 ~ 28007474 (-)
G20090 NA non-coding upstream 262214 28109762 ~ 28114304 (-)
G20091 NA non-coding upstream 268352 28115900 ~ 28116767 (-)
G19840 NA other downstream 735541 27088606 ~ 27089064 (-)
cul3b cul3,LOC104924156,LOC100710156,LOC107099750,LOC108240497,LOC104940878,LOC103474461,LOC108428259,LOC102194569,LOC101170875 other downstream 1354709 26451380 ~ 26469896 (-)
LOC120570434 fam124b other downstream 1378670 26434281 ~ 26445935 (-)
LOC120570356 ypelc,ypel2,LOC106931471,LOC106940241,LOC101067200,LOC107659943,LOC106603438,LOC107599611,LOC101078269,LOC104940871 other downstream 1489886 26307064 ~ 26334719 (-)
trip12 trip12 other downstream 1734903 26041295 ~ 26089702 (-)
G20417 scarf1 other upstream 1599622 29447170 ~ 29448655 (-)
im:7138535 NA other upstream 2119881 29967429 ~ 29972350 (-)
rnf26 rnf26 other upstream 2240187 30087735 ~ 30091711 (-)
cbl cbl other upstream 2307345 30154893 ~ 30198071 (-)
arhgef12a arhgef12 other upstream 2721325 30568873 ~ 30618434 (-)

Expression


Co-expression Network