G20019


Basic Information

Item Value
gene id G20019
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 27868594 ~ 27913558 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU27271
TTCCTTTTATAGGAAAATTTTAATAGTTATTCAATGTTCTacattttacagtaaatatacaATTACAAACTTGGCTTAGTTATAGTACTAGATCACTAactgatctttaaaaaaaaaaaagaaacctaaaaaaacaaattaaaaacagatttaCACTTCATATCACAAGCCTGACGCTGGTCCTTCACTCTGGACCAAATAGCTAACATACAGTTCACTTCTCTCAACGCTGAACAGACGTTGGGCTTCAGTTTTAAACACAACCTTACGGTAACAGATATACCATAGCATGTGCAAACTGGGTACCAAACTAAAACTTCCAAAGATGGGGTTGTTCCTAATACTCAATCCATTgagggagggaagggggggggggtaataCAAGTATGCTTTTTTTTGGAAGACAAGGAATTTCCACTTTTTGCATCACATTTAGTGTCAAATTAAACTAAGATATTGTTGAaaaattgaaattaaaaagcTGCAGCAGAACATCAAAGACATGTAAGAGCCTACTATTCACTGGGATAGTAGTGTTTTAATTTATACTtgtggaaaaaaactaaaacaaactaaGACTTAGCAACTGCAAGGCAAAAAAAGACAAGGGAAGATGGAAGGAGTGTTGTGAATAGTTCTGGTTGCATTTTCACTGTAAAGTGAAGAAGCGTAGTATTAAAATTTACTGGATTAAAAGCTAAAAAGAACTGAGTAATCCTCATTAAAGTTACCACCATTCAACGTTTGGAAATGTCACCGAGGACAATACGATGGGAGGAAAATAAACCCATGATTAAGACAACTTTGCATTTCCCCCCACTGAACACATCAAAGTGTTCAAATGTCCATTTTCCCTTAAGTGCAAATCGAAATAAATGAGAGGCAAGGAATGGAGTGAAATGAGGAAGCAGTTTCACCACCCTGACAAAACCAACCTGCTCTGTGGGAGCACTTTAACTTCAACTACCCCAAATGTTCTGTGGGTCTGCCTCTCTACTGAGcctccacacacaaaaaaaaaaggaattagttttttttaagagcaTTGGTCCATTAAAAAAACTCTTAACACTCCACTCAAAATAATCAACTCCTCCTATAAGAACAAATAAAGCCTTATTTTGTGTCTGAAATGGCATTTTTGAAAAGGTCTGAAAAAACGACATTCCATttggaaaagacaaaaatatcTCAGTGCTTAGAAGGTGACATCCAATTGTGATTCTCGAATGTAAATGACACCTATAAATCCTTAATTTATCATTCTGGTACAAAGCCTTGACCATGAGACACTGGCGACATCTAGTGTTTAAAAAGGCTCAGTGGAGATTTCACAAAGAAATGGAGTATCGCTGTTAGTGACACCAATTTAATGACTATGATATAGTTCATCATGACTGCTACTGCGACAGGGTGGTGAGGGTTGCAAAGGTCAGACCGAAAGCACATAGAGACCAAAAGGAGACATGAGAGGGAGCAGAACATGTGATCCGACATCATTTTGCATCCCtgaatgtgataaaaaaaaaaactgaatatttgaATGGTTGGAGGGATGCAAAATGGCCTCTGAAGTGAAAATAGGATAAACACAGAGGATAGAGTAAGAAAGATAAAAGTGAGACAGGCAAAATGCATTAACAACAATGTGAGGAACAGGACAGCAATAGGAAAACACAGATTCACAGGAAGCTAGACATAACAAGGACTTTCACCAGTTACTTAGGAGAAGAAACTAATAGTTTACTTAACTGTTGGTGAAATATGGCACAGAACAAAGGGCGTGGAGGCTGAGGGTTTTCATTCATCATTCAATACATCTTTGCACCCACAGAACAGAAACGGACAGCGAAGATGGCCCCCAAAAGCATCATGGCAACAATTTTTCAGTCAaccaaaggaagaaaaaaaagctgctaTCCATTTGCATTCTGTCATTAATCCTCTGCTTCCTCAAGGTCTGTGAATTCAGACAATTCAATTGTGGGATTTGGTGATGTGAATTTCCACAAGTTTGTTGACAGACCTTGTTCCCCTCGTCAGTAAACAGACACGTAGAGATGCAGAAAAggtaaagaaaatatatatattaaaagcaCAAACAGTAGCTGCCACACTGATGCAACCATGCTTAGCTAGAAATACATTACTGTACCACTTGCTGTATAAAtatactgcattttttttttttaacttagaTATCCAATGCTATAGTGAAATACACCTGAATATTATGCATACCCATTATGCTCAATTGACCagagggaaagaagaaaaagaaaaaaaaacaaaaacataagacTTTATTGAGAAATACTGACAGAAGTAGTGGTTGGTTAAATAAATCCTAATGACGAGTCACAATACTGCTGTCGCAAGAAAACCCACTTTCTGGATTCTTTTCAGTTGTACTGGCTTGAGTTAAAACGTACAAGATCTTTGCGTGGTGGGAACAATATATGACCCATAAACATCCACTTATCTTGTAAAATACAAGGGCCGTTTCAAAAATAAGGCTCAAAGATCGACGGTTTTCATCCGACAGCGGTATTATGCAATATTTTCTTGAGAATTAACCTACTAGTGTACAAACATCTGGACTAAGAATACCTCAAACACTCAaccttattgttttattttttaattacaatataatttttttcatcTTGCACTAACAAGATAGGTACCTGTTACTTAGcattaaattataatttttttgtcttatgTTCTGCAATATTTCCACAGTTATTCAATACTAAATTTTTGATATGTTCCTACTTCTCTTCTTAGCAGTAACTGCAATAATTATTGAATGGAGGCTGCATACAGAGCCTTTAGAGATTACAataagcttctttttttaaatcaattcaaaACACTCAGAAAATAATTACTGTATGTTAACAGTTTGAGGCGTTCCCGCTTATTTTATTGCAATATCAAACCACTTCATCTACATACCCGCGAAGTAAATGATTTTTGTTATACAAATCTGTACTCTACAGATCATGAACTTGTAATTTGAgtcttttttgtgtgtacaTCCTGAAAAATACCACACGCCTCACTTAAATATTaaaccccaccaccaccactactcGGTATGTTTGTAGTGTTAGATTAAAATGGGTCATCATACTGCCTTTGCACATGAAGGTCTCTACATGTATAAGCATAAAAGGCAACAGAAAATGAATAGCTGTATAGGGTCCATGTCTCATTGGCTCAAATATTATCCTCATCTGATGACTATCAAGGTTATGCATGGACTTAAAAAAATTGACtattatgttttgtgttttaaatgcAGTCAGTTAAAGCAGATGTGTAaatttccagaaaaaaaaaataatgattggATTTATCATGACAAATggatttttcataaaaaaatgacttaaagtCTGAAAAGCCAACTGGACTGAACCAGTTTACAACTAAGTGACCGCATCATCATGGCTCTGCACTCTTGCTAAAATGTCTTAATATTGTTCAACTGTTGGAGCCACAAACCCTAAAaccagcacttttttttttactacagtGCTCTTGCAATTCATATGGTAATACCGACAAAGTTCAAATTTTGACCCAAATTCAGAGCATAACAAATCATCCCTATGACATAGACCAGGTGTATACACACTACAGCCCTCTGATTTGCCATCATTTCTTCCTAAATGTGGTGCACAACCACCCATGTCACTGGTTTGGTCTTTTCAGCACTCACAGAACTGTGAAATGGACTAGTGGATTGAAACCTATCCATTCATCAGCACATGTATTTGACTGGTCCACTATTAACTGTATACTCGAGAGCGTGGGTTTCTATTTGTTGAGTGTTTGGTTATAAAGTCCTCGCCTgaaaggatggaggaggaggtgatgtAATCACAGTGAGGAATCAATGTACAATACATGTAGTGCAAAAATAGCAGTGTTTGGGTGGCCTCTTGCAGGTGACATGTCCCAAACTCAAATGTCTTGTACCTTGAAATGAAATAACCCGACTGTGAATATGTgagctcctcctccttccttaaAGTCTGCTCTCTCCATCCAGTCCTGCTCTCCTCTCTTTGCGCCAACACAATCCCTTTAAACTCCTTCTCTGCTGTCTGCCATGCACACCCCTAGAAACCCACGtcacgtacgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgatcagtaACAACATAACTGGAGGTATTGTATAGTAAGTGCCACTAAGtgatcatgtgttttttttctgacacaACGCAGgagcccctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtatgtgtgtgtgtgtgtg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU27271 True 4325 lncRNA 0.39 3 27868594 27913558

Neighbor

gene id symbol gene type direction distance location
alkbh8 alkbh8 coding downstream 4071 27850024 ~ 27864523 (-)
gucy1a2 gucy1a2,LOC102775648 coding downstream 48481 27771968 ~ 27820113 (-)
msantd4 msantd4 coding downstream 137090 27725434 ~ 27731504 (-)
pdgfd pdgfd coding downstream 388528 27407761 ~ 27480066 (-)
LOC120553392 NA coding downstream 611598 27247233 ~ 27256996 (-)
p2ry2.1 p2ry2 coding upstream 127891 28041449 ~ 28046085 (-)
trnam-cau_1 NA coding upstream 152767 28066325 ~ 28066397 (-)
yif1b yif1b coding upstream 227985 28141543 ~ 28147451 (-)
trnar-acg NA coding upstream 237022 28150580 ~ 28150652 (-)
bloc1s3 bloc1s3 coding upstream 347043 28260601 ~ 28262791 (-)
G20012 NA non-coding downstream 96697 27769501 ~ 27771897 (-)
G19967 NA non-coding downstream 123020 27745285 ~ 27745574 (-)
G19963 NA non-coding downstream 125129 27743215 ~ 27743465 (-)
G19916 NA non-coding downstream 329036 27510793 ~ 27539558 (-)
G19915 NA non-coding downstream 382117 27486185 ~ 27486477 (-)
G20049 NA non-coding upstream 70711 27984269 ~ 28006577 (-)
G20056 NA non-coding upstream 93483 28007041 ~ 28007474 (-)
G20090 NA non-coding upstream 196204 28109762 ~ 28114304 (-)
G20091 NA non-coding upstream 202342 28115900 ~ 28116767 (-)
G20092 NA non-coding upstream 204160 28117718 ~ 28118289 (-)
cwf19l2 cwf19l2 other downstream 21046 27824605 ~ 27847548 (-)
G19840 NA other downstream 779530 27088606 ~ 27089064 (-)
cul3b cul3,LOC104924156,LOC100710156,LOC107099750,LOC108240497,LOC104940878,LOC103474461,LOC108428259,LOC102194569,LOC101170875 other downstream 1398698 26451380 ~ 26469896 (-)
LOC120570434 fam124b other downstream 1422659 26434281 ~ 26445935 (-)
LOC120570356 ypelc,ypel2,LOC106931471,LOC106940241,LOC101067200,LOC107659943,LOC106603438,LOC107599611,LOC101078269,LOC104940871 other downstream 1533875 26307064 ~ 26334719 (-)
G20417 scarf1 other upstream 1533612 29447170 ~ 29448655 (-)
im:7138535 NA other upstream 2053871 29967429 ~ 29972350 (-)
rnf26 rnf26 other upstream 2174177 30087735 ~ 30091711 (-)
cbl cbl other upstream 2241335 30154893 ~ 30198071 (-)
arhgef12a arhgef12 other upstream 2655315 30568873 ~ 30618434 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location