G20049



Basic Information


Item Value
gene id G20049
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 27984269 ~ 28006577 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>TU27313
CAGTGAACTGATTTAATTACAAAGAGGAACCTACAGTGACAAAACGAGTACAACTACATACAGTAACTCTGATAGACTGTAACCATGACAACTGCAACCAGATCCAGAGATAAACAGAGTTGGGACCAGGTTGTTTTTCCTTCCTGTATAGATTTCCGTAACAAGGCAAAGATACATTTCCGAGCTAATATGGCTACCAGTAAAAACATCAATGCCAAAACTCTACCTTTAAGTCACCCTGGTGGCCATCTTTCTTTTGGAAAGATCTATGACAGTTATAATTTAAACGTCACTGACAGCGCATGCCAGAGAGGAGAAGGgggaaaaatacaaacaaaaacaaaccttacacaaatatataaaaatatgccATAAGATTCATATCAACAATTGAGGACCATGTGGGTGCACTATTTACAGAAAAAGGCAATATATACCAATATTTACAACAATAAAGACTTCTTTCACATACGGGCATGAGGACGTGACTTACAAGTCTGCTGCGTATTACAGTGATGGTAGAATGAGTTTGATGTGATGGCAAAAATTAAGTGTAAATCTTCAACATGCGTCATTCTCTCAATCTGGGTCAAATTAGCATCACGTTTTTAAATCCAAGACAcagcgtgtttgtgtgcatgcttgtATGTCCGTAAAATGAAAAGAGTCTAAGTCAACCCACTGGGCTCAAAACCTAAAATGCACCTGCTGAAAATATAATTACTCAGTCAATCATTCTTATGAAACTACCAAGGAAACATAAAAGTATATTCTCAAGGCAAATATTTTTCTGATTTGAAAGAAAATCTACAAACTTTCTCAATGGGCTGAATTGAAAGTTACCGACTACAACCATGGTAGCGGTTTCAGCCCAGAAAACTAAGAAAATTAATTAATACACTAGAGATTCAGTGAAGTGGGGACCCACCATGGAGGGGCTGCTACCCTTTTTTGCTGCCCAACTCACAGTTTTAGAAACGATGCTCCAAAGGCGCTGGCACTCAGATGTTCCTCCCCTCAATTTCTCACAGAAAACATACTAACTCCATTTTGCAGGGAGCTCTTCATTACTCTAAAGCCAGCATAGATATACAGCATTTTCATGGGTGACTTGTCAGGTCTTGGCACAAGAACACAAATATTAATTTTGTTGTCAATCAtacagaacataaaaaaaacacttatatCTGCTACCTTAACTTTAGAAGACGGTAAAGGAATAATTGAACATTATGGGAAATAATGGTATTAACTTTTTTGctcagagttagataagaagattaATCATGCCTTATCTTATTTGTTGTGAGATTACAAAAACCAAAATGTACACAAAAATGGCACGCTGTAGTCTTACACTTTTTTATATGGAATAAGTAAACAAGAGGTTTATTTTTGTACCTTTGGAACAAGCCAGTCTAGCCATTTCCCTGTTTCCAGTGtttatgctatgctaagctaagctaaatgGCTTCTGGCTGTAGTTTAatatttaccgtacagacatgagagtggtgtcAATCTTTTTCGACCGGAGTCTCAACAGGAAGCCGAATAAGCAGCTTTTCTTAAAATGTTGAATTAGTCCTATAACATCTGCTAAAATTCTAAAACTATTCTCTGCTGTATTCTTCACATGCTACCACAAGCTAACTGTAATTTTGCCTCATAGTGGGCAGAAAATCACAAACAACGTCCTTTTAAAATCTTTCAACTGATTAACGGAGCActtggaggacacacacacacacacacacacacacacacacaTGCATTTTGTTCTCCAACAATCAATACTGAAATCAGTGTTTGTGCATTAGGGTGTAACAGTACATCTTAGCGCTATATTTCCTGTGACAAAAATGCCACAATATGCACTGTGGAGCTGAAAAATAGTTAAATATTTAGTAAATCTTTGCATTCGGCACCCAAACAGGCAATAGAGTGACTGTGTTGAGGAGGATCGAGCTGCGTTCAGAGACAACTTGAGGTGAATTTTGGGATCAGTTTGCAGTCTgggtagcctggttgacaccagaccctcctcagttgtaactgagagtgggtctggggaaggttcattcacagcccatttccaaaggacCAACAGACGCTGCTCAAAagcctctgggcgcattggatatTCCAACCAAtgagaccaacgatccgggtgacgtagcagtgaCAGCGgtatcaacgggttgctgcgcttcggtggtcgtcatgttgaatgtaaacaaaaagctgcttgccgtcgctgcgctatcgtcatcgtgtaaagcccacctcaatggttgtgattggtgccttgatttagaaaaattggaaatgggtttgaatgagCTCTTGGCCGGAcagacttgcagagcaaatctcaaatttgccggaagttcgccAGGGGTTTCCCAGGCTACAGTCTGGTTCTTTTGGCCACAAACAGCCAATAAATGAGTAGAGACAAAAATATTTCCAGACCCTCTCCTTTCTGGATTTGTTTCCCTACATTTAGGGAGTTACACAACTCCGAAACAAAAACCCTGTATTGTGCATCGTACCGAACCATGACTGAACTGCATCGTTACACCCCtgctgtgtatgtctgtgtgccaGAACCAAACCATACCCATTTATCTATTCTGCTAATCAAGCCAGGGCCTCCATGTTCTtcaattcaaaaacaaaaagtgaaagCTAAATCGTCTATAAATTAAGTGCTGTAAAAGAAGGCGGTAAAATCAAAAccataaatactgtacataactGTCGTTATCTGCTACCACAGCCTAGCGTCATAAAAGTCAGTAACACCAGCTCCTGATTTCTGCTCAACAAACTGAAAATTCATGGACAACGAATCTTTTCAGATCCCTTAATGCCAAAACTGTAACACATACAAGGCTTTGGCATAGTCATGTTAAGGAGGAACATCTCCAATCCAATTTTTTTTCTACTCAACTCCAACAAAAACTTAACAAAATCTGACACAAAGTGATTAGCTgtggaaaacacacatttatgttTCTCACCAATGTCTTCAGTGAGTGAAGGCTgtgcattaatgtgtgtgtgtgactgtgtgcatgtgcCTTGCTAGATACCCTTGCCACATATTGCACTTTAATGATATTCACTCTCCCTCTACAGGAGAAAGGATTATTTCAGCAGTCTCACATCTATAAGCAATGATCGTGGAGTAGATATTATTACAACCCTACTGCCATTAGGGGGTGTGTCTAGATGACAAGAATACTCTGTCTTTTACTCCTTTAAAAGCTCACAGATGTCAACTGAACCTCTCTTCCATGCTTGAGCTCTACTGTAGTTGCAGAAATGGATGCAAATCCAGGATATCCATTA
>TU27314
CAGTGAACTGATTTAATTACAAAGAGGAACCTACAGTGACAAAACGAGTACAACTACATACAGTAACTCTGATAGACTGTAACCATGACAACTGCAACCAGATCCAGAGATAAACAGAGTTGGGACCAGGTTGTTTTTCCTTCCTGTATAGATTTCCGTAACAAGGCAAAGATACATTTCCGAGCTAATATGGCTACCAGTAAAAACATCAATGCCAAAACTCTACCTTTAAGTCACCCTGGTGGCCATCTTTCTTTTGGAAAGATCTATGACAGTTATAATTTAAACGTCACTGACAGCGCATGCCAGAGAGGAGAAGGgggaaaaatacaaacaaaaacaaaccttacacaaatatataaaaatatgccATAAGATTCATATCAACAATTGAGGACCATGTGGGTGCACTATTTACAGAAAAAGGCAATATATACCAATATTTACAACAATAAAGACTTCTTTCACATACGGGCATGAGGACGTGACTTACAAGTCTGCTGCGTATTACAGTGATGGTAGAATGAGTTTGATGTGATGGCAAAAATTAAGTGTAAATCTTCAACATGCGTCATTCTCTCAATCTGGGTCAAATTAGCATCACGTTTTTAAATCCAAGACAcagcgtgtttgtgtgcatgcttgtATGTCCGTAAAATGAAAAGAGTCTAAGTCAACCCACTGGGCTCAAAACCTAAAATGCACCTGCTGAAAATATAATTACTCAGTCAATCATTCTTATGAAACTACCAAGGAAACATAAAAGTATATTCTCAAGGCAAATATTTTTCTGATTTGAAAGAAAATCTACAAACTTTCTCAATGGGCTGAATTGAAAGTTACCGACTACAACCATGGTAGCGGTTTCAGCCCAGAAAACTAAGAAAATTAATTAATACACTAGAGATTCAGTGAAGTGGGGACCCACCATGGAGGGGCTGCTACCCTTTTTTGCTGCCCAACTCACAGTTTTAGAAACGATGCTCCAAAGGCGCTGGCACTCAGATGTTCCTCCCCTCAATTTCTCACAGAAAACATACTAACTCCATTTTGCAGGGAGCTCTTCATTACTCTAAAGCCAGCATAGATATACAGCATTTTCATGGGTGACTTGTCAGGTCTTGGCACAAGAACACAAATATTAATTTTGTTGTCAATCAtacagaacataaaaaaaacacttatatCTGCTACCTTAACTTTAGAAGACGGTAAAGGAATAATTGAACATTATGGGAAATAATGGTATTAACTTTTTTGctcagagttagataagaagattaATCATGCCTTATCTTATTTGTTGTGAGATTACAAAAACCAAAATGTACACAAAAATGGCACGCTGTAGTCTTACACTTTTTTATATGGAATAAGTAAACAAGAGGTTTATTTTTGTACCTTTGGAACAAGCCAGTCTAGCCATTTCCCTGTTTCCAGTGtttatgctatgctaagctaagctaaatgGCTTCTGGCTGTAGTTTAatatttaccgtacagacatgagagtggtgtcAATCTTTTTCGACCGGAGTCTCAACAGGAAGCCGAATAAGCAGCTTTTCTTAAAATGTTGAATTAGTCCTATAACATCTGCTAAAATTCTAAAACTATTCTCTGCTGTATTCTTCACATGCTACCACAAGCTAACTGTAATTTTGCCTCATAGTGGGCAGAAAATCACAAACAACGTCCTTTTAAAATCTTTCAACTGATTAACGGAGCActtggaggacacacacacacacacgcgcacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacggagtgA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU27313 True 3357 lncRNA 0.57 2 28002713 28006577
TU27314 False 1846 lncRNA 0.38 2 27984269 28006577

Neighbor


gene id symbol gene type direction distance location
kbtbd3 kbtbd3 coding downstream 103455 27872415 ~ 27880814 (-)
alkbh8 alkbh8 coding downstream 119746 27850024 ~ 27864523 (-)
gucy1a2 gucy1a2,LOC102775648 coding downstream 164156 27771968 ~ 27820113 (-)
msantd4 msantd4 coding downstream 252765 27725434 ~ 27731504 (-)
pdgfd pdgfd coding downstream 504203 27407761 ~ 27480066 (-)
p2ry2.1 p2ry2 coding upstream 34872 28041449 ~ 28046085 (-)
trnam-cau_1 NA coding upstream 59748 28066325 ~ 28066397 (-)
yif1b yif1b coding upstream 134966 28141543 ~ 28147451 (-)
trnar-acg NA coding upstream 144003 28150580 ~ 28150652 (-)
bloc1s3 bloc1s3 coding upstream 254024 28260601 ~ 28262791 (-)
G20019 NA non-coding downstream 70711 27868594 ~ 27913558 (-)
G20012 NA non-coding downstream 212372 27769501 ~ 27771897 (-)
G19967 NA non-coding downstream 238695 27745285 ~ 27745574 (-)
G19963 NA non-coding downstream 240804 27743215 ~ 27743465 (-)
G19916 NA non-coding downstream 444711 27510793 ~ 27539558 (-)
G20056 NA non-coding upstream 464 28007041 ~ 28007474 (-)
G20090 NA non-coding upstream 103185 28109762 ~ 28114304 (-)
G20091 NA non-coding upstream 109323 28115900 ~ 28116767 (-)
G20092 NA non-coding upstream 111141 28117718 ~ 28118289 (-)
G20093 NA non-coding upstream 112632 28119209 ~ 28120499 (-)
cwf19l2 cwf19l2 other downstream 136721 27824605 ~ 27847548 (-)
G19840 NA other downstream 895205 27088606 ~ 27089064 (-)
cul3b cul3,LOC104924156,LOC100710156,LOC107099750,LOC108240497,LOC104940878,LOC103474461,LOC108428259,LOC102194569,LOC101170875 other downstream 1514373 26451380 ~ 26469896 (-)
LOC120570434 fam124b other downstream 1538334 26434281 ~ 26445935 (-)
LOC120570356 ypelc,ypel2,LOC106931471,LOC106940241,LOC101067200,LOC107659943,LOC106603438,LOC107599611,LOC101078269,LOC104940871 other downstream 1649550 26307064 ~ 26334719 (-)
G20417 scarf1 other upstream 1440593 29447170 ~ 29448655 (-)
im:7138535 NA other upstream 1960852 29967429 ~ 29972350 (-)
rnf26 rnf26 other upstream 2081158 30087735 ~ 30091711 (-)
cbl cbl other upstream 2148316 30154893 ~ 30198071 (-)
arhgef12a arhgef12 other upstream 2562296 30568873 ~ 30618434 (-)

Expression



Co-expression Network