G22458


Basic Information

Item Value
gene id G22458
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 37902256 ~ 37903681 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU30517
tgtatctaCATCAAAAGTGGACATAACAGGAATTGTCATGTGTCAATCCCCTCACCTCTCCCCAGATACCGGCAGTGTCATGAAGGTTGTGTTTGTGATAAGAGAGCTGCCTGATGCAGTTGTTGACAGCAACACTGCTCTTGCCGGGAACCATGTCCTCCTCAGACATCTCTACCCAGCCCAGAGAACGCACTGCAAAACACTGACAATACAAATATATGCAGCACATTAGTACAATAGAGGACAGCACAGGGAGGGTGAAGAACTATTTAGTTAGGACAGGGTGGAAATCGGTGGTGTGTTGGATCCTGTACAGCAGAGGTCTTCAACatgttttaagccaaggaccccttaactgaacgagagacagagcagggaccccctactacatattatatataaatttcggtacctgagagcttgtaagcgcaagcttatctgtcctctctcctctctggtctTGTTCTGGCTCTCAACGAAGGCGGTCgcattttctccctctcctcccgtaGCCTGCCTTGCTTTGCTCTCTCGTctagtctttgtctctgtgtacttTGAGAGTAtctctctctgcactgctcCAAAAACCAAGAATTATGAATTTGATCAACTGGTCTCTCAGCGCAATTGACACCATCTTCTCGACGAGAAGCCTGGGTTCGGGGGAacctgactgccctgccggaACGTTCGCAGCTGGCTACACGATTGACGAGTGGGAGAGGTGGCGGCTCTTTCCGTGGAGGACATTGAAGATATCTACCTATTCGGAACCATGATAACAGgtcttttgctgattggctTAGGCATTACCCTGGTTTATCGAGAAATTAAGCAGCAGACGACAGCCGAACAAAGTACAAGGCTGCCCGTTATGGTGgaagctgtgggcagagctgtcGGAACTCAGATTGGGACTATGATGGATACCATCTTGGAGAAACTGACAGCTTTGGAAAGGCTGGACAACATCTTGGAGAAACTCACGGCTTTGCAAAGGAAATTTGATCGATTCGGAGACCAGAGTGGACATTTTAGAGAAGACGAGTGAAATTAAATGCGGCTACTCACCCTAAGACAAAACAAATCCTCTCCCACAGACACCTGCTGATTGTTGGCTCGGACTGGGTCATGTTCAAGGttgactccatggcaaccggctGTGTATCGCTATGACAATCTTGCGGACTGAGACAACGAGATTACGGAGCCAGACCTAGTTTGACTActcaggcctacacacacacgaattgtcatattgtatgtttgtatatgtatggTCAGGTTGATTGCTGATTTCGCTGCTACTTGTgactatgtgacaataaaggctactactactacatatgacagagagcagagctcccgcacgcgcacacacacatgtgca

Function

GO: NA

KEGG:

id description
ko00140 Steroid hormone biosynthesis
ko04913 Ovarian steroidogenesis
ko04927 Cortisol synthesis and secretion
ko04934 Cushing syndrome

RNA

RNA id representative length rna type GC content exon number start site end site
TU30517 True 1393 lncRNA 0.35 2 37902256 37903681

Neighbor

gene id symbol gene type direction distance location
rrp8 NA coding downstream 26101 37869532 ~ 37876155 (-)
LOC120551759 NA coding downstream 116378 37784943 ~ 37785878 (-)
LOC120551756 NA coding downstream 125650 37775674 ~ 37776606 (-)
LOC120548891 NA coding downstream 129720 37771547 ~ 37772536 (-)
or95a1 NA coding downstream 154543 37746746 ~ 37747713 (-)
stim1a stim1,LOC101465674,LOC102214188,LOC103353587 coding upstream 832484 38736165 ~ 38765038 (-)
pgap2 LOC103353585,LOC100712494,LOC102213892 coding upstream 863864 38767545 ~ 38770608 (-)
LOC120554189 LOC103353607,LOC108235982,LOC106521500 coding upstream 877621 38781302 ~ 38782231 (-)
LOC120551793 NA coding upstream 934518 38838199 ~ 38839088 (-)
LOC120549135 NA coding upstream 979817 38883498 ~ 38885224 (-)
G22371 NA non-coding downstream 234312 37667639 ~ 37667944 (-)
G22321 NA non-coding downstream 335801 37566234 ~ 37566455 (-)
G22320 NA non-coding downstream 336081 37565863 ~ 37566175 (-)
G22308 NA non-coding downstream 474952 37423842 ~ 37427304 (-)
G22291 NA non-coding downstream 525951 37373188 ~ 37376305 (-)
G22462 NA non-coding upstream 2681 37906362 ~ 37910118 (-)
LOC120575673 NA non-coding upstream 400125 38303806 ~ 38351320 (-)
G22520 NA non-coding upstream 448701 38352382 ~ 38352586 (-)
G22563 NA non-coding upstream 910098 38813779 ~ 38814207 (-)
G22575 NA non-coding upstream 981546 38885227 ~ 38885642 (-)
p4ha3 p4ha3 other downstream 155974 37732841 ~ 37746282 (-)
LOC120571840 LOC103356713,LOC100701072,LOC102300918,LOC101484608,LOC102193268 other downstream 204117 37692438 ~ 37698139 (-)
si:ch211-105f12.2 LOC103368707,LOC107379995,LOC102080198,LOC107090084 other downstream 246461 37651459 ~ 37655795 (-)
tada2a tada2a other downstream 451416 37438986 ~ 37450840 (-)
G22245 dynll2a,LOC107554284 other downstream 632936 37264573 ~ 37269320 (-)
robo2 NA other upstream 449343 38353024 ~ 38648599 (-)
LOC120570635 sel1l3,LOC103353588 other upstream 823827 38727508 ~ 38735823 (-)
LOC120546248 LOC103363423,LOC101478053,LOC102201911,LOC102303851 other upstream 2039890 39943571 ~ 40033156 (-)
cadm2b cadm2,LOC100695412,LOC103378151,LOC106520568,LOC102793287 other upstream 2386324 40290005 ~ 40470176 (-)
cntn5 NA other upstream 4125992 42029673 ~ 42167037 (-)

Expression


Co-expression Network