G22462


Basic Information

Item Value
gene id G22462
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 37906362 ~ 37910118 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU30523
TATGTTCACATTTATTGTGCAGTGActtttatatacatacattttatacaccTAATTTACATGAACAGAAATAAATTAATCTGCAAATGTTCTTTAGTGTTGCCACTGTCCGGACACagcaaactttgaaaaagctAAATAATTCCAAGTGACACATGAATGACATGGCAGTAATATGAGTCAATGCAGTCTAATTTTCATTAGTGTTATATATTACACATAAAGAAGCAGTTGGTAAGAGTTTTAGTGGTAGTTATAACTTCTAAGACGTTAAAAACATCTAACAGGAATaaatgaatgtaagtttgaAAAAAGGCAGTTCAATAAGGTCAGACAACAGAGCAGACTCCATGACAGCTTTATGCTGGAAATCTGTCACACTGCTACTCAAATAGGACTCATTTCCGATCCATACGTTTAGAACATGGATTATGTATTTTGTGGCTATATTTTATACAAGTACTAAACTTCTTTAGCACTCTTTTGAGGACACTTCTGATTTCAGCCTTCTTCTAAacgtaaaaatataaaatatgagtgttttttaaaatacaaaacatctaGAATGATTAAAAGTTGTGAACAATTCAATGCTGATAGCAGGTAAATGACTTAAtccaaattattttaaaaaaatggctTTATTTTAGACCATAGATCAATCATTATGCACCAGTTAGACTCAAACATTTAACACAGACAGTCTCACTTTAATATCAGCATGATATAGTGGACACGTTTCATAGatgtattttttgtcttttaaattaaGTTGCATTTGTTATGCATGTCTATACATTCTTTTTCACAATATTTGTTGTAATTTAATTCTTAtttgtagactttttttttttttTTTTATCTTTGCCATTAATTGCTGCCTCAAGTGTGTCATTGATTATATCCATACCTGAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU30523 True 916 lncRNA 0.48 2 37906362 37910118

Neighbor

gene id symbol gene type direction distance location
rrp8 NA coding downstream 30207 37869532 ~ 37876155 (-)
LOC120551759 NA coding downstream 120484 37784943 ~ 37785878 (-)
LOC120551756 NA coding downstream 129756 37775674 ~ 37776606 (-)
LOC120548891 NA coding downstream 133826 37771547 ~ 37772536 (-)
or95a1 NA coding downstream 158649 37746746 ~ 37747713 (-)
stim1a stim1,LOC101465674,LOC102214188,LOC103353587 coding upstream 826047 38736165 ~ 38765038 (-)
pgap2 LOC103353585,LOC100712494,LOC102213892 coding upstream 857427 38767545 ~ 38770608 (-)
LOC120554189 LOC103353607,LOC108235982,LOC106521500 coding upstream 871184 38781302 ~ 38782231 (-)
LOC120551793 NA coding upstream 928081 38838199 ~ 38839088 (-)
LOC120549135 NA coding upstream 973380 38883498 ~ 38885224 (-)
G22458 NA non-coding downstream 2681 37902256 ~ 37903681 (-)
G22371 NA non-coding downstream 238418 37667639 ~ 37667944 (-)
G22321 NA non-coding downstream 339907 37566234 ~ 37566455 (-)
G22320 NA non-coding downstream 340187 37565863 ~ 37566175 (-)
G22308 NA non-coding downstream 479058 37423842 ~ 37427304 (-)
LOC120575673 NA non-coding upstream 393688 38303806 ~ 38351320 (-)
G22520 NA non-coding upstream 442264 38352382 ~ 38352586 (-)
G22563 NA non-coding upstream 903661 38813779 ~ 38814207 (-)
G22575 NA non-coding upstream 975109 38885227 ~ 38885642 (-)
G22579 NA non-coding upstream 996118 38906236 ~ 38906709 (-)
p4ha3 p4ha3 other downstream 160080 37732841 ~ 37746282 (-)
LOC120571840 LOC103356713,LOC100701072,LOC102300918,LOC101484608,LOC102193268 other downstream 208223 37692438 ~ 37698139 (-)
si:ch211-105f12.2 LOC103368707,LOC107379995,LOC102080198,LOC107090084 other downstream 250567 37651459 ~ 37655795 (-)
tada2a tada2a other downstream 455522 37438986 ~ 37450840 (-)
G22245 dynll2a,LOC107554284 other downstream 637042 37264573 ~ 37269320 (-)
robo2 NA other upstream 442906 38353024 ~ 38648599 (-)
LOC120570635 sel1l3,LOC103353588 other upstream 817390 38727508 ~ 38735823 (-)
LOC120546248 LOC103363423,LOC101478053,LOC102201911,LOC102303851 other upstream 2033453 39943571 ~ 40033156 (-)
cadm2b cadm2,LOC100695412,LOC103378151,LOC106520568,LOC102793287 other upstream 2379887 40290005 ~ 40470176 (-)
cntn5 NA other upstream 4119555 42029673 ~ 42167037 (-)

Expression


Co-expression Network