G22563


Basic Information

Item Value
gene id G22563
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 38813779 ~ 38814207 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU30671
tatatatataaaattgtaattgtaattataaaatTTCCCTTAAGTAATTGCATATTTCTCATATCATTTTGCCTAGTGTTGGTGGTTTCTGTCCATCAGCTCCCTTCTGATGAACCTCTACCACATCAGAGCCATCTCTTAAGTTTTTACAGCAAATGTGGCAAGTTTCTTGGTTTACAACAATATGACTCATGTTCAAAGTTGGAGTGTACTTTTTCCTCAAGCTAATCCAACAATGTCATCCTCTCTTAATACACTCACATTGTTGGCCTTTGTCATGTGTTAGAAATCTTTCTAATGTTCTTTTGACACCCCCATAAAATGACACTGAGCATGTGTCTGAGAATAAGACATTTGTGCTgtaatatacactaccggtcaaaggttttagaacacccaatctttttagtttttttattgaaatttgag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU30671 True 429 lncRNA 0.34 1 38813779 38814207

Neighbor

gene id symbol gene type direction distance location
LOC120554189 LOC103353607,LOC108235982,LOC106521500 coding downstream 31548 38781302 ~ 38782231 (-)
pgap2 LOC103353585,LOC100712494,LOC102213892 coding downstream 43171 38767545 ~ 38770608 (-)
stim1a stim1,LOC101465674,LOC102214188,LOC103353587 coding downstream 48741 38736165 ~ 38765038 (-)
rrp8 NA coding downstream 937624 37869532 ~ 37876155 (-)
LOC120551759 NA coding downstream 1027901 37784943 ~ 37785878 (-)
LOC120551793 NA coding upstream 23992 38838199 ~ 38839088 (-)
LOC120549135 NA coding upstream 69291 38883498 ~ 38885224 (-)
LOC120546317 NA coding upstream 166138 38980345 ~ 38997012 (-)
hmgb1b hmgb1,LOC105030464,LOC106521520,LOC103377997,LOC106612439 coding upstream 194232 39008439 ~ 39011326 (-)
hdac12 LOC104966765,LOC106921057,LOC100691652 coding upstream 459047 39273254 ~ 39276078 (-)
G22520 NA non-coding downstream 461193 38352382 ~ 38352586 (-)
LOC120575673 NA non-coding downstream 462459 38303806 ~ 38351320 (-)
G22462 NA non-coding downstream 903661 37906362 ~ 37910118 (-)
G22458 NA non-coding downstream 910098 37902256 ~ 37903681 (-)
G22371 NA non-coding downstream 1145835 37667639 ~ 37667944 (-)
G22575 NA non-coding upstream 71020 38885227 ~ 38885642 (-)
G22579 NA non-coding upstream 92029 38906236 ~ 38906709 (-)
G22591 NA non-coding upstream 138807 38953014 ~ 38953369 (-)
G22629 NA non-coding upstream 228882 39043089 ~ 39043577 (-)
G22632 NA non-coding upstream 237003 39051210 ~ 39051898 (-)
LOC120570635 sel1l3,LOC103353588 other downstream 77956 38727508 ~ 38735823 (-)
robo2 NA other downstream 165180 38353024 ~ 38648599 (-)
p4ha3 p4ha3 other downstream 1067497 37732841 ~ 37746282 (-)
LOC120571840 LOC103356713,LOC100701072,LOC102300918,LOC101484608,LOC102193268 other downstream 1115640 37692438 ~ 37698139 (-)
si:ch211-105f12.2 LOC103368707,LOC107379995,LOC102080198,LOC107090084 other downstream 1157984 37651459 ~ 37655795 (-)
LOC120546248 LOC103363423,LOC101478053,LOC102201911,LOC102303851 other upstream 1129364 39943571 ~ 40033156 (-)
cadm2b cadm2,LOC100695412,LOC103378151,LOC106520568,LOC102793287 other upstream 1475798 40290005 ~ 40470176 (-)
cntn5 NA other upstream 3215466 42029673 ~ 42167037 (-)
LOC120574039 nlk,nlk2 other upstream 4422475 43236682 ~ 43346673 (-)
LOC120553425 NA other upstream 4886764 43700971 ~ 43716741 (-)

Expression


Co-expression Network