G22811 (LOC104947776)


Basic Information

Item Value
gene id G22811
gene name LOC104947776
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 39864821 ~ 39867487 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU30987
CACGCTGTGCTTCTGGTCTATGTTACAAATACTtacagcacatacagtatgcatttTTTAAACAGTAACCGTTCCCAAAACATCCAAATGGTATATTTATAGgtaatacatatgtatatacatacatacatgtgcaTTAAAAAACCAAAAAGCTCACAACGCACTCAAAGCATTAGAATGGAATAACAGTACATTGATACAGTGTTAAACCTAAATTAGCAAGCAAATTGtgcactggaaaaaaaaaaaaaaatcatacttGGGGTAAACATTTCATGAAGGTATGATATTACAGGTTGCATAGAATTGTtttcaatttcaaaataaaactgcaaATAAGCATGACATTTGTAAAGTAGTGACTGTGAAGTTAGTGTCTAGCATAGGATATACAGTAGTATGAGGTAATCAGATTTTATGGCAATCCTGTGCCTGgatctggaaaaaaaacaaacactgataCATGGAAAGCTTGTGTGCACATTAACAATGTTCTAATGCAAACATGGCACATAAGTGTATTCTATATTAAAATCCCAATAACAAACAAGTTATACGGTTTGTAAAGCGAGGTTACAAGCAAAATTAAAAAGGGAGATGAAATGATATATGATTTATGTCTGCACTAAGTAACAagcattgaaaaataaataaatgcatttttaaactAATGAGTCAGGGAGAGGAGAACAGTTCTGACAGCGGTGAGGATGGTTGAGGGTAAAACATTTCATTCCCTTTAAGTGAAACCTGCCAAACTTGTTAGAAGATGTTtcgaggttttaaaaaaaaagatgtaacaGCACAGACAACACAACGGCGCGCTGTGCGAGGGATCTGGAGTCCCAGCTAGCTCTACTAAGCTGCAGGAGTCTACACTTAGAAATGAAGCATACCTGTGACTGAAAATAGTTCCTGTTGTGGACCTGGAACTACTACTATAGAACACTGTACATTGCAGACCAGCTGTCTTAAAAGTCCATACTACACACTCTAACAGTTTCACTTTTCTTATTTGCTTAAGTGCCATGCGGCAATTATAAGGTCTTAAAATCATCCAGTGTTTCAACAACTAAATATTAGGGGGGATTTAACAATAACAATTGGCCATTGATAAATATTATGTTTCATGGGATACACTGTAAAACACAAACTGCTTGAAATACAGTAGATCAGACACATTTTGTCACAATTCCATTCAAATCAGCATTTagacgttttttttgtttttttttacaacgtCAAACAgtctcaaaatataaaaacaaacgcATGCAAAAACATGagcaaaatgtgaaaaatattttttcacttGCCTTACAGATCACACAGGACAAAACGTAACATACATCataaaacgtcaaaaaaagtgtGATTTCTTAGGCACGCACTGAATCTAAGGACAGGTCGCTATAAGAACAGACAGGTTTACCTAGTGTAAGCAAACTACGGACAGTGTCTTGATGCAGAAACGCCCCCGCTGTTGACAGCTACTACGGTATGCAAAATATCCGCCTGCTCTTCATCTACTCAGCAAAACACCAAATGCCATTCAAGTTAAGAGGCATCTTCTGTAGCACCTTTGGAAATGTAATAACacggcttttttttcttctttttggatCAAATGGCATTAAAGGTGTAGTAGGTAAgacatatttgctgaaactgaccctatgttccagtagaactacatgaagcaggtcattgggaggtgtctaactgcgtgtcaatcactgctcatgcacacgcattcattctcccttgtaggggggaggggcttaggagaccgttttgggctttagcagaaaggggggggagagggactgagaagttgtcgatgttcacattttttggctaagtcctggatcttcccaatcctacctacggcacctttaaaagCAAATCAATAAGTGAGCGCTGACGACTCGACTAGTGCCTTCAAACAGCTGCTAACAAAGCCCGTCTCCTAGTTAGTGTCCGGACCACTCCCCGGCCGTGGGAGGGACGCAGTAATTCAAGTAGTATTTCTGAATAGAATCAAAGCTCTTGTTGCTTGTGTTGCTACACACACAATCTTCGTTTTTTttcttggtttttttttttttatctaaatgtGAGGCACTTGCAAAACTAAAATATTAACTAAAGAATCTCAATGGTCGGTGTGTTTGTTAGACCTCGGAGCTGTCACTGAGGGCTTGTGTCACCATGGGCTCTGCGCTGCTGGAGCTCTTGGGTACGCCTTTCTTCTCTCGCTTGGACCGGACCAGTAACACCACCACGATGACGACGAGCACCGTCAGGAGCAGCCCGACAAAGACGCCGATGATCAACACTAGTCTGTCGTCGCCGCTGTCTCTCTGGTTGAGCTCACGGGGGAGGATTCCTCTGGTGGAGATCTCCCTCTCTGGGCTGGTCCTCTGCTGGCTGCTGCGGTCCAGCGCGATGTGGAGGATGTTGGTGCCGCGGTTGTTGCTCTGACCGATGTCCTCTATTATGTCTGGCACGTCGTCGGCCGATCTTCTGCTGCGACGTTGACCCTTTGGAAGCAGATTTGAGTGCCGGCTCATCACGTGGTACTCCAGGCTTCTCTTCCCTATGCCACGGTTAGCGTTGTCTCGAGAACGGACAGTGTAGATGGTGTGAATGTACCACTCTCTCCCT

Function

NR:

description
PREDICTED: FRAS1-related extracellular matrix protein 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU30987 True 2667 lncRNA 0.43 1 39864821 39867487

Neighbor

gene id symbol gene type direction distance location
LOC120546381 LOC103363428,LOC101062185,LOC102204297 coding downstream 86901 39759961 ~ 39777920 (-)
LOC120546392 NA coding downstream 108243 39735716 ~ 39756578 (-)
LOC120546526 tuba1c,LOC101079871,LOC107557552,LOC106676044,LOC105935211,LOC101066234 coding downstream 168216 39693607 ~ 39696605 (-)
spartb LOC101480805,LOC102300300,LOC102204879,LOC102787978 coding downstream 173642 39680280 ~ 39691179 (-)
dclk1b NA coding downstream 190519 39639678 ~ 39674302 (-)
LOC120546419 LOC104923287,LOC104947775,LOC103363426,LOC101479268 coding upstream 921 39868408 ~ 39901447 (-)
LOC120546408 NA coding upstream 24722 39892209 ~ 39901251 (-)
LOC120546558 LOC103363424,LOC104943694 coding upstream 36625 39904112 ~ 39912760 (-)
LOC120544420 bach1 coding upstream 359882 40227369 ~ 40260253 (-)
usp16 NA coding upstream 392873 40260360 ~ 40268274 (-)
G22818 NA non-coding downstream 7035 39857436 ~ 39857786 (-)
G22816 LOC101479746,LOC102301626,LOC102203644,LOC100692726,LOC102798843 non-coding downstream 10227 39854280 ~ 39854594 (-)
G22815 LOC103363427,LOC100692726,LOC101479746,LOC102798843 non-coding downstream 11216 39853322 ~ 39853605 (-)
G22814 NA non-coding downstream 13585 39851037 ~ 39851236 (-)
G22813 LOC104947776,LOC100692726 non-coding downstream 25991 39838591 ~ 39838830 (-)
G22826 NA non-coding upstream 56726 39924213 ~ 39924451 (-)
LOC120544464 NA non-coding upstream 317260 40184747 ~ 40226319 (-)
G22917 grik1,LOC104963619,LOC107585794,LOC102776120,LOC103378149 non-coding upstream 371845 40239332 ~ 40240348 (-)
G22918 grik1,LOC102307112 non-coding upstream 374096 40241583 ~ 40244030 (-)
G22919 NA non-coding upstream 379734 40247221 ~ 40248092 (-)
LOC120570635 sel1l3,LOC103353588 other downstream 1128998 38727508 ~ 38735823 (-)
robo2 NA other downstream 1216222 38353024 ~ 38648599 (-)
p4ha3 p4ha3 other downstream 2118539 37732841 ~ 37746282 (-)
LOC120571840 LOC103356713,LOC100701072,LOC102300918,LOC101484608,LOC102193268 other downstream 2166682 37692438 ~ 37698139 (-)
si:ch211-105f12.2 LOC103368707,LOC107379995,LOC102080198,LOC107090084 other downstream 2209026 37651459 ~ 37655795 (-)
LOC120546248 LOC103363423,LOC101478053,LOC102201911,LOC102303851 other upstream 76084 39943571 ~ 40033156 (-)
cadm2b cadm2,LOC100695412,LOC103378151,LOC106520568,LOC102793287 other upstream 422518 40290005 ~ 40470176 (-)
cntn5 NA other upstream 2162186 42029673 ~ 42167037 (-)
LOC120574039 nlk,nlk2 other upstream 3369195 43236682 ~ 43346673 (-)
LOC120553425 NA other upstream 3833484 43700971 ~ 43716741 (-)

Expression


Co-expression Network