G22816 (LOC101479746,LOC102301626,LOC102203644,LOC100692726,LOC102798843)


Basic Information

Item Value
gene id G22816
gene name LOC101479746,LOC102301626,LOC102203644,LOC100692726,LOC102798843
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 39854280 ~ 39854594 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU30992
TCCCAATGGTGCCTCCACAGTCACTAAGCAGCTCAGACATGTCGTAGTAGCTGGTGAATTCCCACAAACACGCCTCCAAGTTGAGGTTTCTGTAGAACCGTAGCGTACTGGATCCCCTGAGGAAAGTGCTGTATTGGTAAGAGGCCGTCTCGCCGATCACTTCCGGATTTTTGGTGGCTTCAGTGAGGAAGCCGTAGCGAGTCTTGACCTCGGCGTAGTCCAACAAATTGGAGCAGCGATGGTTGCCAACACGGGTACCGTCGGGGCTCAGCGTGAGCTCAAAGTTGGACAGGGCTCGGGTGGACACTACAGGCA

Function

NR:

description
FRAS1-related extracellular matrix protein 2 isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU30992 True 315 lncRNA 0.55 1 39854280 39854594

Neighbor

gene id symbol gene type direction distance location
LOC120546381 LOC103363428,LOC101062185,LOC102204297 coding downstream 76360 39759961 ~ 39777920 (-)
LOC120546392 NA coding downstream 97702 39735716 ~ 39756578 (-)
LOC120546526 tuba1c,LOC101079871,LOC107557552,LOC106676044,LOC105935211,LOC101066234 coding downstream 157675 39693607 ~ 39696605 (-)
spartb LOC101480805,LOC102300300,LOC102204879,LOC102787978 coding downstream 163101 39680280 ~ 39691179 (-)
dclk1b NA coding downstream 179978 39639678 ~ 39674302 (-)
LOC120546419 LOC104923287,LOC104947775,LOC103363426,LOC101479268 coding upstream 13814 39868408 ~ 39901447 (-)
LOC120546408 NA coding upstream 37615 39892209 ~ 39901251 (-)
LOC120546558 LOC103363424,LOC104943694 coding upstream 49518 39904112 ~ 39912760 (-)
LOC120544420 bach1 coding upstream 372775 40227369 ~ 40260253 (-)
usp16 NA coding upstream 405766 40260360 ~ 40268274 (-)
G22815 LOC103363427,LOC100692726,LOC101479746,LOC102798843 non-coding downstream 675 39853322 ~ 39853605 (-)
G22814 NA non-coding downstream 3044 39851037 ~ 39851236 (-)
G22813 LOC104947776,LOC100692726 non-coding downstream 15450 39838591 ~ 39838830 (-)
G22812 NA non-coding downstream 19817 39834264 ~ 39834463 (-)
G22807 LOC104960197,LOC102301626,LOC103363427,LOC101479746 non-coding downstream 52333 39799299 ~ 39801947 (-)
G22818 NA non-coding upstream 2842 39857436 ~ 39857786 (-)
G22811 LOC104947776 non-coding upstream 10227 39864821 ~ 39867487 (-)
G22826 NA non-coding upstream 69619 39924213 ~ 39924451 (-)
LOC120544464 NA non-coding upstream 330153 40184747 ~ 40226319 (-)
G22917 grik1,LOC104963619,LOC107585794,LOC102776120,LOC103378149 non-coding upstream 384738 40239332 ~ 40240348 (-)
LOC120570635 sel1l3,LOC103353588 other downstream 1118457 38727508 ~ 38735823 (-)
robo2 NA other downstream 1205681 38353024 ~ 38648599 (-)
p4ha3 p4ha3 other downstream 2107998 37732841 ~ 37746282 (-)
LOC120571840 LOC103356713,LOC100701072,LOC102300918,LOC101484608,LOC102193268 other downstream 2156141 37692438 ~ 37698139 (-)
si:ch211-105f12.2 LOC103368707,LOC107379995,LOC102080198,LOC107090084 other downstream 2198485 37651459 ~ 37655795 (-)
LOC120546248 LOC103363423,LOC101478053,LOC102201911,LOC102303851 other upstream 88977 39943571 ~ 40033156 (-)
cadm2b cadm2,LOC100695412,LOC103378151,LOC106520568,LOC102793287 other upstream 435411 40290005 ~ 40470176 (-)
cntn5 NA other upstream 2175079 42029673 ~ 42167037 (-)
LOC120574039 nlk,nlk2 other upstream 3382088 43236682 ~ 43346673 (-)
LOC120553425 NA other upstream 3846377 43700971 ~ 43716741 (-)

Expression


Co-expression Network