G22962


Basic Information

Item Value
gene id G22962
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 40391348 ~ 40489408 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU31168
aatagctacagacacagaaatggcacatcctaaggaaagctcaatgtgggactggctctagtggctgtaattctgcaccaaggctgaattttgggaaagagacttcagatacagtattaggggaccactaaggtctaaaagagacttcagatacagtattaggggaccactaaggtctatataaaagagacttcagatacagtattaggggaacactaag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU31168 True 220 lncRNA 0.42 2 40391348 40489408

Neighbor

gene id symbol gene type direction distance location
usp16 NA coding downstream 123074 40260360 ~ 40268274 (-)
LOC120544420 bach1 coding downstream 131095 40227369 ~ 40260253 (-)
LOC120546558 LOC103363424,LOC104943694 coding downstream 478588 39904112 ~ 39912760 (-)
LOC120546419 LOC104923287,LOC104947775,LOC103363426,LOC101479268 coding downstream 489901 39868408 ~ 39901447 (-)
stoml3a stoml3,LOC104925222,LOC101073007,LOC105935001 coding upstream 335345 40824753 ~ 40832594 (-)
slc25a15a slc25a15,LOC103152068,LOC106945435,LOC103475195 coding upstream 346260 40835668 ~ 40844838 (-)
cog6 cog6,LOC102796367 coding upstream 434617 40924025 ~ 40955064 (-)
trnak-uuu_7 NA coding upstream 542398 41031806 ~ 41031878 (-)
lpar6a lpar6,LOC104952799,LOC101069375,LOC103363548 coding upstream 627270 41116678 ~ 41119295 (-)
G22936 NA non-coding downstream 103479 40287638 ~ 40287869 (-)
G22919 NA non-coding downstream 143256 40247221 ~ 40248092 (-)
G22918 grik1,LOC102307112 non-coding downstream 147318 40241583 ~ 40244030 (-)
G22917 grik1,LOC104963619,LOC107585794,LOC102776120,LOC103378149 non-coding downstream 151000 40239332 ~ 40240348 (-)
LOC120544464 NA non-coding downstream 165029 40184747 ~ 40226319 (-)
LOC120545373 NA non-coding upstream 36161 40525569 ~ 40561333 (-)
LOC120545377 NA non-coding upstream 37588 40526996 ~ 40531357 (-)
G22972 NA non-coding upstream 42010 40531418 ~ 40536651 (-)
G23008 LOC103360897 non-coding upstream 267891 40757299 ~ 40758353 (-)
G23010 NA non-coding upstream 272172 40761580 ~ 40761780 (-)
LOC120546248 LOC103363423,LOC101478053,LOC102201911,LOC102303851 other downstream 358192 39943571 ~ 40033156 (-)
LOC120570635 sel1l3,LOC103353588 other downstream 1655525 38727508 ~ 38735823 (-)
robo2 NA other downstream 1742749 38353024 ~ 38648599 (-)
p4ha3 p4ha3 other downstream 2645066 37732841 ~ 37746282 (-)
LOC120571840 LOC103356713,LOC100701072,LOC102300918,LOC101484608,LOC102193268 other downstream 2693209 37692438 ~ 37698139 (-)
cntn5 NA other upstream 1540265 42029673 ~ 42167037 (-)
LOC120574039 nlk,nlk2 other upstream 2747274 43236682 ~ 43346673 (-)
LOC120553425 NA other upstream 3211563 43700971 ~ 43716741 (-)
smco4 NA other upstream 3280658 43770066 ~ 43789435 (-)
mrps23 mrps23 other upstream 4327220 44816628 ~ 44824993 (-)

Expression


Co-expression Network