G23008 (LOC103360897)


Basic Information

Item Value
gene id G23008
gene name LOC103360897
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 40757299 ~ 40758353 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU31221
ATTTTAGAATTGCAAAGATAAGATTATGCACTCTTTCATTAGAAAAAATAACTGTGAACATATTTCCAGTATAagaaaagaattttttttttttaaataatcgttCAATAATCGTAATCGAGGTAAATTGTTCGATTAATCGGGAttatgattttagccaaaatcgTCCAGCCCTACATCAGGTCTTTCCATCTTTGGAAggcagctccaatgttcactttttttatgatgaagccggtctcttgctcttttcaatctcctttttctttatctgggcaaagaagaagactcctgtttctgaaatttggattttgaatacgtgtggtcctccatgtttccttcttcaaacttgccggggccgggaagctacgatacccatgtgacattatcatgtgacagcgaaaacgcaaaaggcggagcagtatgtcctgtatgtcccttaccggctaacgtatttcaagatggcgcatgaatatggagagtctaccccagttcatgcgaatgcaaatgttttcaagccaataggaatacttggaattgatggtggaggtaaatattcatggaaaaggacaagtttgtgaacgggcaacacagattttgataatgaacaactaaacacgttacacactggaccttcaAAGTGTCTTACCGATAACATAAGAGAGGATGAGGTTCCAGCCTGTGATGAAGGCCCACAGCTCCCCAACCGTCACATAGCTGTAGAGGTAGGCCGAGCCAGTTTTGGGGACGCGGGCTCCGAACTCGGCGTAGCACAGTCCGGCCAGGACCGAGGCCAGGGCAGCTATGAGGAAGGAGAGGACGATGGCAGGTCCGGCACTGTCCCGCGCCACAGCGCCGGCGAGCACGTACACTCCGGCGCCCAGCGTGCTGCCCACGCCCAGGGCCACCAGGTCAAACGTGTTGAGGCATCGAGACAGGCGCGAGTCCTCCGCATTGCAGTCCACAACCTTCACCCGGAGGAGCTGCTTCCCAATGTCCTTCAATGTGGCCAGAATCATCCCGGCTGGCTCCAAAAGCTCCACGCAAGATTATTG

Function

NR:

description
PREDICTED: high affinity cationic amino acid transporter 1-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU31221 True 1055 lncRNA 0.47 1 40757299 40758353

Neighbor

gene id symbol gene type direction distance location
usp16 NA coding downstream 489025 40260360 ~ 40268274 (-)
LOC120544420 bach1 coding downstream 497046 40227369 ~ 40260253 (-)
LOC120546558 LOC103363424,LOC104943694 coding downstream 844539 39904112 ~ 39912760 (-)
LOC120546419 LOC104923287,LOC104947775,LOC103363426,LOC101479268 coding downstream 855852 39868408 ~ 39901447 (-)
stoml3a stoml3,LOC104925222,LOC101073007,LOC105935001 coding upstream 66400 40824753 ~ 40832594 (-)
slc25a15a slc25a15,LOC103152068,LOC106945435,LOC103475195 coding upstream 77315 40835668 ~ 40844838 (-)
cog6 cog6,LOC102796367 coding upstream 165672 40924025 ~ 40955064 (-)
trnak-uuu_7 NA coding upstream 273453 41031806 ~ 41031878 (-)
lpar6a lpar6,LOC104952799,LOC101069375,LOC103363548 coding upstream 358325 41116678 ~ 41119295 (-)
LOC120545373 NA non-coding downstream 195966 40525569 ~ 40561333 (-)
G22972 NA non-coding downstream 220648 40531418 ~ 40536651 (-)
LOC120545377 NA non-coding downstream 225942 40526996 ~ 40531357 (-)
G22962 NA non-coding downstream 267891 40391348 ~ 40489408 (-)
G22936 NA non-coding downstream 469430 40287638 ~ 40287869 (-)
G23010 NA non-coding upstream 3227 40761580 ~ 40761780 (-)
G23011 NA non-coding upstream 3671 40762024 ~ 40764005 (-)
G23012 zgc:63694,LOC108410642,LOC107752277,LOC107699226,LOC107555275 non-coding upstream 7498 40765851 ~ 40766068 (-)
G23013 NA non-coding upstream 10565 40768918 ~ 40769125 (-)
G23014 NA non-coding upstream 11388 40769741 ~ 40769981 (-)
cadm2b cadm2,LOC100695412,LOC103378151,LOC106520568,LOC102793287 other downstream 287123 40290005 ~ 40470176 (-)
LOC120546248 LOC103363423,LOC101478053,LOC102201911,LOC102303851 other downstream 724143 39943571 ~ 40033156 (-)
LOC120570635 sel1l3,LOC103353588 other downstream 2021476 38727508 ~ 38735823 (-)
robo2 NA other downstream 2108700 38353024 ~ 38648599 (-)
p4ha3 p4ha3 other downstream 3011017 37732841 ~ 37746282 (-)
cntn5 NA other upstream 1271320 42029673 ~ 42167037 (-)
LOC120574039 nlk,nlk2 other upstream 2478329 43236682 ~ 43346673 (-)
LOC120553425 NA other upstream 2942618 43700971 ~ 43716741 (-)
smco4 NA other upstream 3011713 43770066 ~ 43789435 (-)
mrps23 mrps23 other upstream 4058275 44816628 ~ 44824993 (-)

Expression


Co-expression Network