G23015


Basic Information

Item Value
gene id G23015
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 40771887 ~ 40775924 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU31228
ttacagcacAAACTATACAAACCGAAACAAATATGAAGACAGCACATGCTGAGCAGCCTGTAAACACAATTAGAACTTAGCAGTACTAGAAAATCCTCCctcaaaaaaaagttttaaaatagTGCAGCATGAAAATGTGTACATAAAACAGACAGTGTCAAGGACAAACATGTTAAGTACTTGCGGTTTCATTTGCATAGATGAAGCCTCACATGAGTTTTACTGGAATAGTGCAGCAGATTAATAAAAGAATTGTTCACTTTGGTATACAAGCATGAATTTTGGCACATATACTCTCTAAGGGCCACTATTTTGGAAAAAGGCGTTGGCCACTCAAAAATTCAATATGGCGGCTATTTTTCAAGATGGCCACcgaatattattaataataataataataattattattattattattatataattgctATTCAATGCTTATTATATCAATTATTCAAACAATGATCCAAGCATAAAATTTGATACAAATTCTCTCTAAAAGGACATCAAGCATGTAAAGATGGCCGCCATTTTTAAAGATGGCCGTCAAATATTAATCAAGCCAAGGGGTTATCCTTTTACCACCTCAATCATAGACATAATACACATTCAGGTATGGGATACAACTAGGTTCGGGTCACCTACACCTAGCCCGATCATTCATCCCGTGCCATTTACACCTTCCAGGTAATCATACATGAACAGGTCATGTATTGCCCCGCTTACCCTTGGCTCGGCTCTCCCGCGCTGGCACAACCTGTCAATTCAGGTGCGGCTATCTAACTACATCTATTACTAGCTAATTGATGAGGGGCTGTAAGACAgcatttgggacactaaacttaGCTATACTATTACTACTAGTCAAGAACTACAGTGTAAGTAAAACTAGATCAGCTGACACTGAACGCCATGCTGAGTTCCACAGCAGTGAAGTCACCAGTGTGCCCTGGTTGTGTAAACGTTCACTCTATTAAACAAAACCTTCCTTAACACATTAAATTGAGCTCTGACAGAAATGGTGGCCATCTTGAAAATGGTCGCCATCTTGAATTTTTGAGTGGCACACACCTTTTTCCATGAGAATGTTCGTTGAAGAATATTTGTACCAAATTTGATAATAGCATCACcatttgaaaaatgtatgtaaGGATTCAAGAGAAATGGCGGCCATCTTGAAAAATCCAAAAAGACATTCTTAAGAGAGTATTTTCACAAAATGTTATGCCTACATCACTGTTTGAACAATTGACATAATGAGCATTTGACAGAAATAGCAGCCATCTTGAAAAAATGGCCACCATATTGAATTTTTGGGTGGCAAACGCCTTTTTCCCAAAGAGCGACTCTTGGAGAGTATCTGTGCCAAATGTCATGCTTGTATACCAATTTGAACGATTCTCTTGAAATATGCCATTAATCTGCTGCACTAGAACTACAGCGTCCATAACAAAAGGCTAAAGCAAGGTCAGTGAAACTAGGGCTGAACGTAAAATCCAACTCTACAAGGCATGATATTCACCCAATGAATGAACTACTTTTTGCTCGCAAACAAATAGATTCCATCCATTTACCGTTAACCGCTACGTTAATGTTGGCACAGTTTGTGCTAGTTATTTACTTTACATAACACTTGTAACAAAAGGATTGTGTAGATTCAAGCTGCGGGGTGATCTGACAGACCGACAAGTGTAACATGGGCAGGAACTTTAAAGCAAAAATCAAAACTGTAtttacaataacaaaaacagacGTGACATGTTGGAAATTGGCACTTCTAAAAACATGTAATGTTATCAACATGTATATGTGCTAATGTCCCACTGATTCAAACATCTCCAAGTTTAAACCAAGTCTAGTTGTGGACGGAAATCACGCTGACATCTCTCCCATAGTGCATGTATACTgagcatgttgtgtgtgtattccaggcctgtgtgtaataactacagagtgaaaaaagaaaacatttcatCGTAGGgctcattttaaaaaaaagggacagagTAAAGAGAGGTTTCACCTTGTGGAATTTTTTTCAGTCTTTAGCGAACACACACAGTTTGATAGGTCACGTTCAGGTTTTAGCTGCCCTGGGAATCTGCACACACTCGCAATCAGCCCTCCCTTCCGTAATCATCCAATCCTGTCTGACGGGCTGAGGCACTTTCACACGGGTTACTGCTGAGCCATGCTAGAACGCTTGGTGCAGCATGTTTCTGAGTATACAGTATTAATATATCACTATGGAAACCGAAAGGTGTTCAATATCACCGATTGATTGTGCTTCATCCCATTCAGATGTATGTGAACTAAAACGTGAAAACAGTCCACTAAGGTGAAATGTCTCtgatatattataaatatatgcTTTTCAAAATCCAAAGTGTACATTATTtacagactatatatatatatatatatatatatatatatatatttcacaaTTCTAGCTGGTGATAAAGCGATATCTCTAAAAAGGTGGAATTCATTTGGGAAAAAGGCACTTTAAAAATACATCTTCTGCAGTATCGGAGAAATCATTTCACATtagcagcttttttttcttgggCTAGATAAGAAAAACACGCAAAGTTCCCTGATGGAGACAGTGTATTTGATCACTGGCAAATGTGCACTGTAAGGAAACCATCAATCATTTAGAAGATAAAACACTGAGATATACTGATCACAGAGCACTTAATCAGAGCACAATGGGGCACTATTCTCAGATATACTGTCGATGTAAAACACAGGTACCTCTGAGGTAAACTTACCACACAAAACGGCACCAAAGATACAGTGAAATTCTCAGCTGAGTTTCAGAAGAATTATTTGCAGATTCTCTGaattaaaggggctgtactcaagAACAATAATATAGCAGTCAATGACTGCTATGTAAAGGTACAGTGGAGTACTGgggtcctgagcagagaatgaagtcacactccctctgtgtgtgtgttggaatcCAAGCTTCTCGGTTTTTCTGTTGTGATAGCTGGTCCGGCCGcgcgtgcatgtgcgtgcatGCGAGTGCACGTAAGTACCTTGTGCGTCTATCCGACCCCGAGGGCCGTGACAAAGCGACAGTATTTGATGAGTTGGGAAAGCagtgtggaggcaatcccagacCATTCTTCTTCTAAATATCAAGTACAGCCCCTTCAATGCAATTAATTCACGTGTGAAataaaggatttaaaaaaataatctcccATGGGATGTGGACACAGTAGCAGGCACTGTTCCTCCTAATGCAGATATATACTGCGGATGAAGGAACCAAAATTATGTTTAACAATAGATATACGGACACCAgttgccttaaaaaaaaaaaaagaaaaactttgtttaaaacgACTTGTTCGTTGCCTTTGGTTGCTTTGGTTCCACAGAaatagaattaaaaaaacatagaaaaattaAGGTTTCTGAAATGAAATATTGGTTTTAAGATGTATCCAGACTCATCttatctttttaaaatgttgttacCTACCTTTTACATCTAATTAGCCTCTCTACTTTCATTAAAAGTTGTGTCTGAAATAAGGAAACGAGTCAACGCTCTGATTGGAGGGTAAGCGTCTCCATACGTCTCCTGGATCGGCAGCTATTTCGGAGAGTTTAACAGGACAGAAACAGAGGGGATTAGTGAACCTCCCGTTTCCTCAGGAATCGTCCTCGTCCTCGTCCTCGTCCTCTCCGGCGGTGTTTTGTGTGTCGTGTAGGAAGGCTTCCTTATCTGTGGCCATGGGCTCTCCCTTTATCGTGCAGGCTGGCGTGGTCGACACTGCCTCTGCACTGTTGCGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU31228 True 3820 lncRNA 0.39 2 40771887 40775924

Neighbor

gene id symbol gene type direction distance location
usp16 NA coding downstream 503613 40260360 ~ 40268274 (-)
LOC120544420 bach1 coding downstream 511634 40227369 ~ 40260253 (-)
LOC120546558 LOC103363424,LOC104943694 coding downstream 859127 39904112 ~ 39912760 (-)
LOC120546419 LOC104923287,LOC104947775,LOC103363426,LOC101479268 coding downstream 870440 39868408 ~ 39901447 (-)
stoml3a stoml3,LOC104925222,LOC101073007,LOC105935001 coding upstream 48829 40824753 ~ 40832594 (-)
slc25a15a slc25a15,LOC103152068,LOC106945435,LOC103475195 coding upstream 59744 40835668 ~ 40844838 (-)
cog6 cog6,LOC102796367 coding upstream 148101 40924025 ~ 40955064 (-)
trnak-uuu_7 NA coding upstream 255882 41031806 ~ 41031878 (-)
lpar6a lpar6,LOC104952799,LOC101069375,LOC103363548 coding upstream 340754 41116678 ~ 41119295 (-)
G23014 NA non-coding downstream 1906 40769741 ~ 40769981 (-)
G23013 NA non-coding downstream 2762 40768918 ~ 40769125 (-)
G23012 zgc:63694,LOC108410642,LOC107752277,LOC107699226,LOC107555275 non-coding downstream 5819 40765851 ~ 40766068 (-)
G23011 NA non-coding downstream 7882 40762024 ~ 40764005 (-)
G23010 NA non-coding downstream 10107 40761580 ~ 40761780 (-)
G23069 NA non-coding upstream 240722 41016646 ~ 41017064 (-)
G23127 NA non-coding upstream 394760 41170684 ~ 41222462 (-)
G23130 fndc3a non-coding upstream 420769 41196693 ~ 41198970 (-)
G23141 NA non-coding upstream 479450 41255374 ~ 41257366 (-)
G23151 NA non-coding upstream 515781 41291705 ~ 41291910 (-)
cadm2b cadm2,LOC100695412,LOC103378151,LOC106520568,LOC102793287 other downstream 301711 40290005 ~ 40470176 (-)
LOC120546248 LOC103363423,LOC101478053,LOC102201911,LOC102303851 other downstream 738731 39943571 ~ 40033156 (-)
LOC120570635 sel1l3,LOC103353588 other downstream 2036064 38727508 ~ 38735823 (-)
robo2 NA other downstream 2123288 38353024 ~ 38648599 (-)
p4ha3 p4ha3 other downstream 3025605 37732841 ~ 37746282 (-)
cntn5 NA other upstream 1253749 42029673 ~ 42167037 (-)
LOC120574039 nlk,nlk2 other upstream 2460758 43236682 ~ 43346673 (-)
LOC120553425 NA other upstream 2925047 43700971 ~ 43716741 (-)
smco4 NA other upstream 2994142 43770066 ~ 43789435 (-)
mrps23 mrps23 other upstream 4040704 44816628 ~ 44824993 (-)

Expression


Co-expression Network