G23648


Basic Information

Item Value
gene id G23648
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 43430630 ~ 43503798 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU31940
aaataatcactaaacttaaacagctttttcacaaaaactgtaaaagatatcaaaacactgagcacaccccgaatacctgaatattttgtgaacattttaaattttgaatcacgtctgtaggtggaagaatgtaggaggagatacattttgaagcagaagaagattttaaggagttgaaccctgctctcattgactttaatgttaaaaaaaagtgttaaaaagcttaaaattttaaaaagtataaatagtagaaaaaaagttgaagaagtcccatcattagctgaaagagatgaacatttgaaaagttgaatggtttaaataggtgaaagtatgcagaagttacagagagccaaaaaacgtacggaataataaaattaaaattaaaataaagaaccgaataacaataggtggaatgctgtagaacagcattcccccaataaagaaccgaataacaataggtggaatgctgtagaacagcattcccccaactagaaaatgcatttcctgcggaaaatgcgtgggaatgctgaatagctgaactgctaaagctaactggttgaatagctgaaatctgtaagaagaagttgaaatagtgagaatagttgaaaaagtggaaatcgttaaaaagttggctttaaaagctgaaaaatgacaaaatatgtagaacattgtgaagtctttagctgaagctgaagaatagttgaaaaagtggaaattggttcaataagttaaagaaagtaagagagggagggaggagggatggagaaagaaggagagagagagaaaaag
>TU31941
gcgcaatacacaccctgtttaatcgataaaatttcctgaaataatcactaaacttaaacagctttttcacaaaaactgtaaaatatatcaaaacactgagcacaccccgaatacctgaatattttgtgaacattttaaattttgaatcacgtctgtaggtggaagaatgtaggaggagatacattttgaagcagaagaggatttgaaggctttgaagcctgctctcattgactttaatgttaaaaaaaagtgttaaaaagcttaaaattttaaaaagtataaatagtagaaaaaaagttgaagaagtcccatcattagctgaaagagctgaacatttgaaaagttgaatggtttaaataggtgaaagtatgcagaagttacagagagccaaaaaacgtacggaataataaaattaaagttaaaaataaagaaccgaataacaataggtggaatgctgtagaacagcattcccccaataataaagaacaggataacaataggtggaatgctgtagaacagcattcccccaataa
>TU31942
taaaatttgaaaaagtataaatagtagaaaaaaagttgaagaagtcccatcattagctgaaagaggtgaacatttgaaaagttgaatggtttaaataggtgaaagtatgcagaagttacagagagccaaaaaacgtacggaagagggaataataaaattaaaactaagaactagaaaatgcatttcctgcggaaaatgcgtgggaatgctgaatagctgaactgctaaagctaactggttgaatagctgaaatctgtaagaagaagttgaaatagtgagaatagttgaaaaagtggaaatcgttaaaaagttggctttaaaagctgaaaaatgacaaaatatgtagaacattgtgaagtctttagctgaagctgaagaatagttgaaaaagtggaaattggttcaataagttaaagaaagtaagagagggagggaggagggatggagaaagaaggagagagagagaaaaag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU31940 True 789 lncRNA 0.33 2 43445657 43459921
TU31941 False 533 lncRNA 0.32 2 43430630 43446433
TU31942 False 471 lncRNA 0.34 3 43445657 43503798

Neighbor

gene id symbol gene type direction distance location
LOC120553532 NA coding downstream 47417 43381126 ~ 43383213 (-)
efhd1 efhd1,LOC100691052,LOC101463816,LOC102780618,LOC103377704 coding downstream 367385 42992791 ~ 43063245 (-)
LOC120549271 NA coding downstream 519893 42904813 ~ 42910737 (-)
gal3st2 LOC104950586 coding downstream 662064 42739636 ~ 42768566 (-)
fat3a fat3 coding downstream 808670 42393288 ~ 42621960 (-)
LOC120570616 LOC104946633,LOC103355253,LOC102792009,LOC102302768,LOC102198488 coding upstream 62782 43566580 ~ 43578411 (-)
omgb omg coding upstream 579287 44083085 ~ 44087251 (-)
LOC120574562 NA coding upstream 591050 44094848 ~ 44098473 (-)
LOC120574575 NA coding upstream 595165 44098963 ~ 44114071 (-)
LOC120551889 NA coding upstream 1234063 44737861 ~ 44739433 (-)
G23594 NA non-coding downstream 57684 43372676 ~ 43372946 (-)
G23592 NA non-coding downstream 61663 43368654 ~ 43368967 (-)
G23591 NA non-coding downstream 63550 43366857 ~ 43367080 (-)
G23581 NA non-coding downstream 76108 43354300 ~ 43354522 (-)
G23579 NA non-coding downstream 79039 43351291 ~ 43351591 (-)
trnaa-ugc NA non-coding upstream 24056 43527854 ~ 43527925 (-)
trnag-ucc_1 NA non-coding upstream 24391 43528189 ~ 43528260 (-)
trnas-aga_1 NA non-coding upstream 24638 43528436 ~ 43528517 (-)
trnag-ucc_2 NA non-coding upstream 25585 43529383 ~ 43529454 (-)
trnaa-ugc_1 NA non-coding upstream 26467 43530265 ~ 43530337 (-)
LOC120574039 nlk,nlk2 other downstream 83957 43236682 ~ 43346673 (-)
cntn5 NA other downstream 1263593 42029673 ~ 42167037 (-)
cadm2b cadm2,LOC100695412,LOC103378151,LOC106520568,LOC102793287 other downstream 2960454 40290005 ~ 40470176 (-)
LOC120546248 LOC103363423,LOC101478053,LOC102201911,LOC102303851 other downstream 3397474 39943571 ~ 40033156 (-)
LOC120570635 sel1l3,LOC103353588 other downstream 4694807 38727508 ~ 38735823 (-)
LOC120553425 NA other upstream 197173 43700971 ~ 43716741 (-)
smco4 NA other upstream 266268 43770066 ~ 43789435 (-)
mrps23 mrps23 other upstream 1312830 44816628 ~ 44824993 (-)
bet1l bet1l other upstream 3631056 47134854 ~ 47142596 (-)
dhx34 dhx34,LOC102778731 other upstream 3791756 47295554 ~ 47325453 (-)

Expression


Co-expression Network