G24548



Basic Information


Item Value
gene id G24548
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 47530034 ~ 47530348 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>TU33033
aaatttgacccatttttaacgtttaaaggtcccatggcatgaaaatttcactttatgaggttttttaacattaatatgagttcccccagcctgcctatggtccccaattggcttgaaatggtgataggtgtaaaccgagccctgggtatcctgctctgcctttgagaaaatgaaagctcagatgagccgttctggaatcttctccttatgaggtcataacaagcaaggttacctcccctttctctgctttgcccacccagagaatttggacaacccatgagagagagacatcatggctttcaaacgagcaaagtg

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU33033 True 315 lncRNA 0.44 1 47530034 47530348

Neighbor


gene id symbol gene type direction distance location
aplp2 aplp2,LOC102785027 coding downstream 60572 47360113 ~ 47469462 (-)
st14a NA coding downstream 174635 47326258 ~ 47355399 (-)
LOC120549478 NA coding downstream 254084 47234553 ~ 47275950 (-)
bckdha bckdha,LOC102788451 coding downstream 304807 47215861 ~ 47225227 (-)
bicra gltscr1 coding downstream 341671 47172227 ~ 47188363 (-)
LOC120575471 NA coding upstream 231117 47761465 ~ 47766270 (-)
LOC120551946 NA coding upstream 284191 47814539 ~ 47825418 (-)
G24523 NA non-coding downstream 59055 47470389 ~ 47470979 (-)
G24518 NA non-coding downstream 164905 47359581 ~ 47365129 (-)
G24512 NA non-coding downstream 278074 47250386 ~ 47251960 (-)
G24508 NA non-coding downstream 315798 47213994 ~ 47214236 (-)
G24507 NA non-coding downstream 316823 47212945 ~ 47213211 (-)
G24557 NA non-coding upstream 35639 47565987 ~ 47566217 (-)
G24560 NA non-coding upstream 44142 47574490 ~ 47574716 (-)
G24589 NA non-coding upstream 133406 47663754 ~ 47663995 (-)
G24623 ddx6 non-coding upstream 239877 47770225 ~ 47771865 (-)
G24618 NA non-coding upstream 246190 47776538 ~ 47792409 (-)
dhx34 dhx34,LOC102778731 other downstream 204581 47295554 ~ 47325453 (-)
bet1l bet1l other downstream 387438 47134854 ~ 47142596 (-)
mrps23 mrps23 other downstream 2705041 44816628 ~ 44824993 (-)
smco4 NA other downstream 3740599 43770066 ~ 43789435 (-)
LOC120553425 NA other downstream 3813293 43700971 ~ 43716741 (-)
nectin1b nectin1,LOC102782356 other upstream 627005 48157353 ~ 48398620 (-)

Expression



Co-expression Network