Gene
RNA
| Item | Value |
|---|---|
| gene id | G24623 |
| gene name | ddx6 |
| gene type | non-coding |
| species | eurasian perch (Perca fluviatilis) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_053113.1 |
| NCBI id | CM020910.1 |
| chromosome length | 48524041 |
| location | 47770225 ~ 47771865 (-) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| symbol | description |
|---|---|
| ddx6 | Predicted to enable mRNA binding activity. Acts upstream of or within response to heat and stress granule assembly. Located in cytoplasmic ribonucleoprotein granule. Orthologous to human DDX6 (DEAD-box helicase 6). |
| description |
|---|
| PREDICTED: probable ATP-dependent RNA helicase DDX6 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU33125 | True | 408 | lncRNA | 0.41 | 2 | 47770225 | 47771865 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC120575471 | NA | coding | downstream | 3955 | 47761465 ~ 47766270 (-) |
| aplp2 | aplp2,LOC102785027 | coding | downstream | 300763 | 47360113 ~ 47469462 (-) |
| st14a | NA | coding | downstream | 414826 | 47326258 ~ 47355399 (-) |
| LOC120549478 | NA | coding | downstream | 494275 | 47234553 ~ 47275950 (-) |
| bckdha | bckdha,LOC102788451 | coding | downstream | 544998 | 47215861 ~ 47225227 (-) |
| LOC120551946 | NA | coding | upstream | 42674 | 47814539 ~ 47825418 (-) |
| G24589 | NA | non-coding | downstream | 106230 | 47663754 ~ 47663995 (-) |
| G24560 | NA | non-coding | downstream | 195509 | 47574490 ~ 47574716 (-) |
| G24557 | NA | non-coding | downstream | 204008 | 47565987 ~ 47566217 (-) |
| G24548 | NA | non-coding | downstream | 239877 | 47530034 ~ 47530348 (-) |
| G24523 | NA | non-coding | downstream | 299246 | 47470389 ~ 47470979 (-) |
| G24618 | NA | non-coding | upstream | 4673 | 47776538 ~ 47792409 (-) |
| G24638 | NA | non-coding | upstream | 97069 | 47868934 ~ 47869394 (-) |
| G24641 | NA | non-coding | upstream | 99584 | 47871449 ~ 47871714 (-) |
| G24644 | NA | non-coding | upstream | 152923 | 47924788 ~ 47925044 (-) |
| G24650 | NA | non-coding | upstream | 179767 | 47951632 ~ 47951833 (-) |
| dhx34 | dhx34,LOC102778731 | other | downstream | 444772 | 47295554 ~ 47325453 (-) |
| bet1l | bet1l | other | downstream | 627629 | 47134854 ~ 47142596 (-) |
| mrps23 | mrps23 | other | downstream | 2945232 | 44816628 ~ 44824993 (-) |
| smco4 | NA | other | downstream | 3980790 | 43770066 ~ 43789435 (-) |
| LOC120553425 | NA | other | downstream | 4053484 | 43700971 ~ 43716741 (-) |
| nectin1b | nectin1,LOC102782356 | other | upstream | 385488 | 48157353 ~ 48398620 (-) |
