LOC120543617


Basic Information

Item Value
gene id LOC120543617
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 6913684 ~ 6929585 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039776759.1
gtgtgtgtgtcagacactTTTTACTTTCACTTCCTCCCGTGTTGTGACACAGATACGTCTCCTccaggttaaacttttgGGATAAAAGATGGCAACGCCTCAAGAGGTCGTCTTAAGAACTTTAGAAGACTTGGGAGCAGAGGACTTTCAAACATTTCAGTGGTACCTACAGCTGAATGGGTGGCTTGAAGGCTTCCCAGCAATCGCAAAGAGCAAATTGGAGAATGTAAACAGGGTGAAGACAGTGGACCTGATGTTCTCGACCTACAGTATGAACACCATTAATGTGACCAGAATAGTTTTAGTGAAAATGAATCAGAATGATCTAGTGAAGAATTTATCAAACACCATCTCAGAACCTGCAGATATTCTTGTTGAATGCCAGCGAAACATCAAATCCAAGTCAAAAaagaagttccagtgtgtgtttgaggggattgctaaagccGGAAACAAAACCTTTCTGAATAAGATGTTCACAAAGATCCACATCACAAAGGGGGGGACTGCAGAAGTAAatgatgaacatgaggtcagacagattgaaacagctTCCTGGAGACAAtacagaccagaaacaacaatcagatGTGAAGACATCTTAAAACccccacctggaagagatgaaccaatcagaacagtgatgactatgggagtggctggcatcgggaaaacagtcttaacacagaagttcactttggactgggctgaaggcattgccaaccaggacatccagttcacatttccattcactttcagggagctgaatgtgctgaaagagaaaaagttcagcttggtggaacttgttcatcgcttctttagtgaaaccaaagaagcaggaatctgcaggtttgacgAGTTCccggttgtgttcatctttgacggtctggatgagtgcCGACTTCCGCTGGACTTCCTCAACACTGaggtcctgactgatgttacagagtccacctcagtgggtgtgctgctgacaaacctcattAGGGGGgaactgcttccctctgctcgcctctggataaccacacgacctgcagcagccaatcagatccctcctgagtgtgttgacatggtgacagaggtcagagggttcactgacccccagaaggaggagtacttcaggaagagattcacAGATAAGGATCAGGCCCGCAGAGTAATCTCCCACATCACATCTCCTGcatcacgaagcctccacatcatgtgccacatcccagtcttctgctggatcactgctacagttctggagaaGGTGTTGGAacccagagagggaggagagctgccaaagaccctgactgagatgtacatccacttcctaGTGGTTCAGTCCAAACGGAAGAATGTAAAGTATGATGGAGGAGCCGAGACAGATCCACACTGGAGTCCAGAGAGCAGGAAGATGATtgagtctctgggaaaactggcttttgagcagctgcagaaaggcaacctgatcttctatgaatcagacctgacagagtgtggcattGATATCACAGaagcctcagtgtactcaggagtgttcacacagatctttaaagaggagagaggactgtaccaggacaaggtgttctgcttcgttcatctgagtgttcaggagtttctggctgctcttcatgtccatctgacattcacgaactctggagtcaacctgctCGCAGAAGCAGAATCATCCATTTGGTTTCAACAATGTTTCTACCAAAAtgctgtggacaaggccttacGGAGTCCAAATGGACAACTAGACTTGTTCCTCCGTTTCCTCCTAGGTCTGTCACTGCAGACCAATCAAACTCTACTGCGAGGTATgatgacacagacagaaagtagCTCATGGACCAATTGGGGAACAGTTAAGTACATCAAGGAGAAGATTAATGagaatctgtctgcagagagaagcatcaatctgttccactgtctgaatgaactggaTGATCGTTCTCTAGTGGAGGAGATCCAACAGTCCCTGAGTTCAGGACATTTCTCCACAgttaaactgtctcctgctcagtggtcagctttGGGTTTCATCTTATTGTCATCTCAAAATGACctggacgtgtttgacctgaagaaatatggtgcttcagaggaggctcttctgaggctgctgccagtggtcaaagcctccaacaaagcttTACTGAGTGattgtaacctgtcagagagaagctgtgaagctctgtccttagttctcagctcccagtcctctagtctgagagagctggacctgagtaacaatgacctgaaggattcaggagggGAGCTGGTGTCTGCTGGACTAAAGAGTCCATactgcagactggaaactctAAGactgagtggctgtaacctgttaaatagaagctgtgaagctctgtcctcagttctcagctccaagtcctctagtctgagagagctggtcCTGAGTAACAATGACCtaaaggattcaggagtgaagatGGTGTATTGTGgcctgaagagtccacactgcagactAGAAACTCTCAGACTGAGTgactgtaacctgtcagagagaagctgtgaagctctgccctcagttctcagctcccagtcctctagtctgagagagctggacctgagtaacaacgacctgaaggattcaggagtgaagatGGTTTCTTGTGgcctgaagagtccacactgcacactggaaactctcagtctgtcaggctgtctggtCACAGAGGAAAGCTGTACTTCTCTGGTCTCAGCAATGAGcgccaacccctcccatctgagggagctggacctgagctacaatcatccaggagactcaggagtgaagctgttGTCTGCTAGACTGGAGGATCCACactggagactggacactctcagGGTGGACCCTAGTGGACCACAGTGGTTGAAACCAGGTCTAaggaagtATGTCTGTGAACTGGAACTGGAtacaaacacagtgaacagatacctcaaactgtctgacaacaacaggaaggtgacacgtGTGAGAGAGGATCagtcatatcctgatcatccagagaggtttgactggtggtctcagctgctgtgtagagatggtctgactggtcgctgttactgggaggttgagTGCAGAGGACTGGTTTTtgtatcagtgagttacagaggaatcagaaaGAAAGGAGACAGTAGAGACTGTTTgtttggagggaatgatcagtcctggtGTTTGGACGGCTCAGATAGTGGATACTTTGTCTGGCACGATAACAAAGAAACATTCatcccatcctcctcctccggtagagtagcagtgtatgtggatgttcctgctggctctctgtccttctacagagtctcctctgactcactgatccacctccataccttcaacaccacattcactcaaccTCTTTATCCTGGGTTTGGTGTCTGGAAACCTGGTTCCTCTGTGActctgtgtcctctgcaggACTGAGAGTCTCTCCTGTGGACAGAAACACTGACTGAAGATTAGCGGCTGAAATCAAAGTTCAGTCTgttcaccatcacacacactctgcactgAGAAGCAGATCTGATACtcaaacacaaaacatttatttgtctGAGCAACATTTTTAAACTATATTTTCTGATGTTTAATCAAATCTTTACTTTCCATCTTGAggtcaatcatttttttttatttgatcacTTGTATGATTTCTGTCATCAGTTGACTCTCTTTACTGAGTTTCAACACATTTCAATCAAGAGAGACTTTGTtacagatatgcaaagattaattgtgcataatatgaaatgtacagagtctttggagattagactccatcgttataaAATACTTTTTGAAAGGAGTAGAGAAGCCAAGACATattcccccgatggagtctagacgcTGGTGGCAGCGGCAAAGGAGCCCGAAGACCAGACTGAAGGAGTCGACAAAGCATTCTGCTAGAGGAAGACCCAGGGTGCCGCGTGTGATGGtgactggaggtggaaggggaggaggagggttgcacgctttgcctgaaatgacagctggcagcagcagagagagaaactgatttaaagcaggatgtaCTGCTGTGATGGGATCATGAATTTTCGTGGccaattctggttggtttaCAGAAAAGTGAACGCCTCTAAACTGCTGAATAGGTTTAGTAAGAAAGAGCAGTGATTTAAGTTATTAGAattcttcctgaaagaatttgcgttTAGCTTCATTAGACCTCATCAGGAGCTCCTGTGATGCTGTTAGGCAGGATGTGTGTTCAAAGAGCTTTGCTAAATGCTAATTCCAGTATGTTATAGGCCGCATTATGGTGACCTTCACACTGACACAGGAAGCTGTTTATGTTTAAATCTGCAGACATTTTTATGCTAAGCTTCCATGTAGGAAAATTAGTATCAGtattgttgtggaaatattagTATCAGTATTGCTTGACATTTAAATTTGGTGTGCTTATTGCAAGAGTTGTGTGCAGTCATAGAGAAAGTGGTTACAAGTTCCAGGCAGGGTACACTTGCATCCCCTGTACAAGGATTAGACTCTGAGTGAGACTCTATAGTGTTGTTCACCAGACAGACTAGCAGAAAAGCAGGAACCGAATGTTATTGTGTTCGTCAGACCGTAAGAGGCAGTCACACCACACTGACCCccacccttgtgtgtgtgtatgtgacaacaGAAGGATCTGCCCCGAGACAGGACGAGGACACCCCATCAAGGAAGAGGATAAAGGTTGAGGGACATTGCAGGGCGGGGCTCACAAACAACAAGAGACTTTGTTTTAACTGAGCTCCGAACACTTGTGTCTGAAGCAAGGGAAACTTAGTGTCATTTGTGAACCCACATATGTGTTGTAAGACTTAACTGCTGGACTTAGTTAACTTTTCCTGACTTGAATCTATCGTCTCAGATTTGATCTTTGAGTTCTGGTGTCATAAATCCCAATCAACAGACGCGCAGGAATTAGTGTTGTTAGAGTAATTGGAGTCAGATACTTAGGCCTTCAGGCCTTCTTGTCTTGTCATGGTCTATATTGCCTTCAACCATTGACTGctgattttttcttttctaattcAACTGTTGCTCAGAGGGATGTTTGTCTCTTTCTGCCCTTTCATTAGCCTGGAAATCTAGACCCAAAAGATTAAGGATCTGagtataagtcttacctactgcacctttaactttaAGACCGGTTATTATTGTGAGGAGCATAGTTCACAAAAATTTCTGACAGGATTAATAATGACATCAATTGTGGAGACATATATGTTGTGTCAATGCTTTTTTGTTTCAcacttttcctgcttttttgttgtttcttttaccgacaacacattttttatgtttttttaattgatgCCGGGTTTTTTTAGGCTTTTTGGATTTCTTTTATGCTTTTAAAATTTTTTGTTTGAACGCTTTTGTACCGCTTTCAACACTTTTGATACTGTTTTGATGCTGTTTTGCAAAAAGAATTACAGTTTTTTGGATACTTTTTGCTGCTTAGCCTACAAtgctttttcaatttaaaatacaaGTCAAAACAGATGAGAGTTTTTGTTCAGTTGTTACAGAATAAAGTGTAACAGATTCACAACAGCAACCCTGTTAAGAAAAGTGCTACAGAAATATTATTCTAACAGCTGCACCGTTTAGCAGCAGACGCATGTAacgtgtaatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtatgtgtatgtgtcagcAGCTTTTTACTTTAACTTCCTCCTGTGTTGTGATGCAGATAAGTTTCCTCCgggttaaacttttggtaagGGACACTTTTCAGCTGATTTCTGATCTGTTAGtttcatcaaactgtgaaaatgtgtttgtgtgtcaatgacttttttctgttttaacaGTTAGCTGCTAGCCACCGTGTTCTGGATCACCAGCTAAACAAGAGCGAACCATGCTAAACGTCATGAAGCTGATTCAGTACAATAACTTTAATGTACTTCTGCTCATGAAAGAATCCGAATCACTTTATCTTCATTCTGTACTGCAGTAAAACTACCAAAACATGTTGTCAAAGTACTGTAAGTACAAGTTAAAGTTCTGCTTTGAAGATTTTACTGAGGTAAAAGGATTATCggctaaatgtacttaaagaatCATAATAAAAGTACACAGATATTggctaaatgtacttaaagtaggcTATCAAAAGTAAGTGGATCACCGGCTGCACAAACAATAGGAGCTAACactgctaaccatgctaaccgTTTTGGAGCTGATTTAGTACAATAACTCAAATGTAGCTCTGCTGACAAATACTTGAGTATTATGAGCTAACTGTACTTTAAGTATCAGAGTAAACGTACACAAGTAATATAAGTTCTCCTGTGCTGGTTTCTgaaatgagtaattcataataATATATCCTCTCCTGTTTGTACTTTACGGTTGTTGGAGTCGTGTTAAGTTACTGTTGATGAAACCCCAACATTTCCTGATATTgcagcttcaaaataaaagcttttataCCACAAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039776759.1 True 6555 mRNA 0.43 9 6913684 6929585

Neighbor

gene id symbol gene type direction distance location
LOC120545568 LOC102303044,LOC101479096 coding upstream 2194 6910543 ~ 6911490 (+)
LOC120545541 NA coding upstream 14102 6898638 ~ 6899582 (+)
LOC120545533 LOC101478539 coding upstream 19187 6893550 ~ 6894497 (+)
LOC120545500 NA coding upstream 138739 6774016 ~ 6774945 (+)
LOC120545496 NA coding upstream 146303 6766452 ~ 6767381 (+)
or55e1 LOC104939064 coding downstream 5461 6935046 ~ 6941434 (+)
LOC120545619 abcf3 coding downstream 436211 7365796 ~ 7396634 (+)
trnal-cag NA coding downstream 482245 7411830 ~ 7411912 (+)
LOC120543955 NA coding downstream 501358 7430943 ~ 7440997 (+)
ece2b LOC103361209,LOC101485402 coding downstream 605514 7535099 ~ 7570718 (+)
LOC120572178 NA non-coding upstream 222793 6690031 ~ 6690891 (+)
G14939 NA non-coding upstream 335231 6578222 ~ 6578453 (+)
G14930 NA non-coding upstream 401798 6511135 ~ 6511886 (+)
G14928 NA non-coding upstream 403710 6508571 ~ 6509974 (+)
G14917 NA non-coding upstream 419034 6494388 ~ 6494650 (+)
G15012 NA non-coding downstream 14737 6944322 ~ 6991913 (+)
G15021 NA non-coding downstream 48214 6977799 ~ 6978105 (+)
G15032 NA non-coding downstream 87210 7016795 ~ 7017311 (+)
G15050 NA non-coding downstream 122601 7052186 ~ 7053965 (+)
G15028 NA non-coding downstream 163543 7093128 ~ 7093466 (+)
spcs2 spcs2 other upstream 496175 6407985 ~ 6417509 (+)
rnf169 NA other upstream 509259 6393062 ~ 6404425 (+)
G14344 NA other upstream 1385065 5510757 ~ 5528619 (+)
G14187 LOC107380983,LOC108250349,LOC108250351,LOC103477369,LOC103473932,LOC107835021,LOC106936810,LOC102294474,LOC102776571,LOC108229490,LOC103360213,LOC107834023,LOC103368570,LOC102214284,LOC102800009,LOC101480046,LOC101470105,LOC102792843 other upstream 1496549 4801340 ~ 5417135 (+)
G14209 LOC102792843 other upstream 2386307 4500173 ~ 4527377 (+)
G15019 NA other downstream 43260 6972845 ~ 6989396 (+)
G15173 LOC102077075 other downstream 468516 7398101 ~ 7399141 (+)
G15234 NA other downstream 561780 7491365 ~ 7492057 (+)
rffl rffl other downstream 877224 7806809 ~ 7853429 (+)
LOC120543808 NA other downstream 897025 7826610 ~ 7828087 (+)

Expression


Co-expression Network