LOC120543635



Basic Information


Item Value
gene id LOC120543635
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 8022628 ~ 8063341 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>XM_039776779.1
ttgtcatcggtttaatgtagcctatattttttatttttatttaagcagcTGCAGGGATAATTTTGTATGGCAAGTTAATCTCTGATTCAACGTGAACAGAAGGTGGCGCTAATTTGCATACTACACTGATTCCTTACCGCtctttggaaaaacacagacgaAGAAAAGTTTGAACAACGCAGCAAGGCGGGATGCAACAGACTGTAGGCTTGTtgtaagttttgaatgttaacATTCATTCACTTTTAGTTTAtacatgtttttatgtgtttgtctcagagAGAGTAGACCTTCTCCAAGCCCCCGCCCTTCACTGGCTTATCACGGGAGTCTTGTTGGGATTGGCAACTTGTCAGATATAGGTTAGCTGCTATAGAGCTAGCCACTTAGCGCGACCACTAACGCTACACACTccagccatagacagtatagaCTCCAGCAGCACAACTAGCGACCTACCACTCCCAGACTCACTGAAGAATTGTACAACGGATGAACGAGTCAACTGCCCGTTCCCGCCCACTTGTGTTGCGTcggttttaaaacaaatgacCCTGCTGGAGGCAAGCTGCTTTTTAtgacaaagatgaataaagtaaaaaccCTTAACAGTAAAGCTTTGGTTTGTAGAAATGGCATTATTGTTGATTAACAATGCAGTAAGGTTCAAGTGtggctgcttttctttacagtaatgttaattttgTTTAATGGCTTTAGTAACTTGACACTTTGGGGCTCAAATGAAAAGATCATTAACAGggaacatttataaatggaagtatttatgatttgacactctttgaatgcttttaatTGTTCAGTTTCATATCAGTTTATGCCTTTGCATCTTGCTGTTCCAGTTTCAAGAAGTTAAGGAAGATAACTGGAAATGTGATAACGATACCAGATGATGGAGACCATATTTCCCCTACGCCGACAGACCATAGTGATGTCCTGCCCACCAGTGAACGACATCATGGACCTCTGGCCTGCTCTCAAAATAGAGTCTGAGTTGTATGCAGAGTTCCAGCGGATTACAAATCAGAACCTGCCCAACACGTGCTATGCTGAGCTTGACCACCATCTTCCTCTAATGATGACCTTATTCAGACAGAAGGCACCAATAACTGGGAAGACAGCAGATGCTCTGgctgaaatttaaaaaatccacgatgaacagGAACCAAAAATGGCAACGCCTAAAGAAGTCGTCTTAAGAACTTTACAAGACTTGGGAGCTGAGGATTTTGAAACATTCCACTGGTACCTACAGCTGAATGGCGGCCTTGAAGATTTCCCAGCAATCCCAAAGAGCAAACTGGAGAATGTAAACAGGGTGAAGACAGTGGACCTGATGTTCTCAACCCACAGTGTGAACACCATTAATGTGACCAGAATAGTTTTAGTGAAGATGAATCAGAATGAGTTAGGGAAGAATTTATCAAATTTATCAAACACCATCTCAGAACCTACAAATATTCTTGCTTCATGCCAGCAAAAAGTCAAATCCAACTCACAAaagaagttccagtgtgtgtttgaggggattgctaaagctGGAAACCCATcccttctgaatcagatgttcacagagatctacatcacaGACGGTGGGGCTAAAGAGGTCAatgatgaacatgaggtcagacagattgaaacagcatcctggagaccagacagaccagaaacaacaatcagatatgaagacatctttaaaactccacctggaagagatgaaccgatcagaacagtgatgactAAGGGAGTcgctggcatcgggaaaacagtcttaacacagaagttcactctggactgggctgaagacaaagccaaccaggacatccagttcacatttaCATTCgctttcagagagctgaatgtgctgaaagagaaaaagtacagcttggtggaacttgttcatTACTTCTtcagtgaaaccaaagaagcaggaatctacAGCTTTGAAGAGTTCccggttgtgttcatctttgacggtctggatgagtgtcgacttcctctggacttcctcaacactaaaatcctgactgatgttacagagtccacctcagtgggtgtgctgttgacaaacctcatcagggggaaactgcttccctctgctcgcctctggataaccacacgacctgcagcagccaatcagattcctcctgagtgtgttgacatggtgacagaggtcagagggttcactgaccctcagaaggaggagtacttcaggaagagattcagagatgaggagcaggccaacagaatcatctcccacatcaagacatcacaaagcctccacatcatgtgccacCTCCCaatcttctgctggatcactgctacagttctggaggacaTGTTGAagagcagagagggaggagagctgcccaagaccctgactgagatgtacatccacttcctggtggttcagtccaaacGGAAGAATGTCAAGTATGATGGAAAATTTGAGACTGATCCACACTGGAGTGAAGAGAACAGGAAGATAATCGAGTCCCTGGGAAAACTGGCCTTTGAGCAGCTTCAGAAAGGCAACCttatcttctatgaatcagacctgacagagtgtggcatcaACATCacagcagcctcagtgtactcaggagtgttcacgcagatctttaaagaggagagaggactgtaccaggacaaggtgttctgcttcgtccatctgagtgttcaggagtttctggctgctgtTCATGTCCACCTGACATTCaccaactctggagtcaacctgctATTGGAGAATTGGAAAACAACCTGGTTGTCTAAAGTCTTCAGAGACAAATCGGAACAAACAACATCAGCACAGTTCTACCAAagtgctgtggacaaggccttacagagtccaaatggacacctggacttgttcctccgccttctcctgggtctttcactggAGACCAATCAGACTCTCCTACGAGGTCtgctgacacagacaggaagtacgTTTGAGGCAAACAAGAAAACAGTTGAGCACATAAAGAAGAAGATTAATCagaatctgtctgcagagagaagcatcaatctgttccactgtctgaatgaactgaatgatcattctctagtggaggagatccaacagtccctgacatcaggaagtctctccacaggtaaactgtctcctgctcagtggtcagctctggtcttcatcatACTGTCTTCAGAGAAAGATCTGGAcatgtttgacctgaagaaatattGTGCTTCAGAGAAGGCTCTTCTGAtactgctgccagtggtcaaagcctccaacaaagctctGTTAAGTGGCTGTGAACTCTCTGAGACAAGTTGTGAAGCCCTGTcgtcagttctcagctcccagtcctccagtctgagagagctggacctgagtaacaacggcCTGAAGGATTCAGGAGCGAAGCTGGTGTCTCCTGGACTGAAGAGTCTAAactgcagactggaaactctcagACTGAGTGGCTgcaacctgtcagagagaagctgtgaagatctatcctcagttctcagctccaggtcctccagtctgagagagatggacctgagtaacaacgacctgaaggattcaggagtggAGCTGGTGTCTGCTGGACTGAGCAGttcacactgcagactggaaactctcagtctgtcaggctgtatGATCTCAGAGAAAGGCTGGATTACTCTGGCCTCAGCTTtgagctccaacccctcccatctgaaggagctggacctgagctataatcacccaggagactcaggagtgaagctgctgtcAGCAGGACTTAAGGACCCTAACTGgagactggaaactctcagGATGGACCATGGTGGACCGCAGAGGTTGAAACCTGGTCTgaggaagtATGGCTGTCAACTggaactggacacaaacacagtgagcagaaaactcaaactgtctgacaacaacaggaaggtgaaatatgtggaggaggatcagccatatcctgatcatccagagaggtttgactcctggcctcagctgctgtgtagagatggtctgactggtcgctgttactgggaggttgagaggagaggagatgtttatatatcagtgagttacagaggaatcaggaggagaggagacagagatgactgtttgtttggatataatgatCAGTCATGGAGTCTGAACAGCTCTGATGATGGTTACTATGTCTGTCACAATAACAGAGTAacatccacctcctcctcctctgtctctaacagagtagcagtgtatgtggactgtcctgctggctatctgtccttctacacagtctcctctgactcactgatccacctccacaccttcaacaccacattcaatCAGCCTCTCTATCCTGGATTCAGGTTCTGGTCtcctggttcctcagtgtctctgagtcCTCTGCAGGACTAAGAGTGTCTcctgtggacagaaacacagactgaACATCAGCTGCTGAAATCAGAGTTCAGTCTgttcaccatcacacacactctgcactgAGAAGCACAtctcagactcaaacacaaaaacattaatttCTCTGACTATTTCTTTGCCGTTTAAATGTTCATTTATACTTCTGTGTAAACTCCTGTGTATTTATACTTCTTCAGGGATGAGACAGTGAGAAACAACATTATGAGTTatggttttatgttttgttatagTGAATATAAGACAGTTACTGTGGGGAATCTGATTAATCAACTTCTAAACTGAAAGGTTTCTACATACTGTAAATGAATCACAAACTGGTCATGTTATTCATAACATAAGACTAAATAAGAGTTTACTGAACTTAATGAGCAAATCATGGTTTTTCTTGATAacactgtttttgtgatcgtatAAATAATTAAACATACTTAAGGTAGGGTGACCGATGGTTTCGGTGACCTGTCCCCGGGTGGAGCTGTCCCTGGAGCTGTCCCAGGTTTTCACTGTGACTGACAGACCCCAAATTGTAAtgacagaaagaaaacattgaccAGACGTATAGACACACACCCTACACACGCACGCTCCAGACAGCCAGAGCAAGCGCTGCTCAGAGCTCAACTTCAGTAAAGTTAGAAAGATATTCACAGATTCTAACTTCTGGGATCAATAACTCTACAgcgaaatgttattaaatcacaaacaacGCATCTTTCCTACCTAAGTAAGGTAAACAACGAgctacaaactcattttcatcaAAATGAGCCGTCCTCCAACCTGGAGAAATAACACCGGCGGTGAGAGGGCGGTaggacgagtgcttagggaccattgtccatccatcttcgtccgcttatccggtgtcgggtcgcgggggg
>XM_039776786.1
ttattgtcatcggtttaatgtagcctatattttttatttttatttaagcagcTGCAGGGATAATTTTGTATGGCAAGTTAATCTCTGATTCAACGTGAACAGAAGGTGGCGCTAATTTGCATACTACACTGATTCCTTACCGCtctttggaaaaacacagacgaAGAAAAGTTTGAACAACGCAGCAAGGCGGGATGCAACAGACTGTAGGCTTGTtgtaagttttgaatgttaacATTCATTCACTTTTAGTTTAtacatgtttttatgtgtttgtctcagagAGAGTAGACCTTCTCCAAGCCCCCGCCCTTCACTGGCTTATCACGGGAGTCTTGTTGGGATTGGCAACTTGTCAGATATAGGTTAGCTGCTATAGAGCTAGCCACTTAGCGCGACCACTAACGCTACACACTccagccatagacagtatagaCTCCAGCAGCACAACTAGCGACCTACCACTCCCAGACTCACTGAAGAATTGTACAACGGATGAACGAGTCAACTGCCCGTTCCCGCCCACTTGTGTTGCGTcggttttaaaacaaatgacCCTGCTGGAGGCAAGCTGCTTTTTAtgacaaagatgaataaagtaaaaaccCTTAACAGTAAAGCTTTGGTTTGTAGAAATGGCATTATTGTTGATTAACAATGCAGTAAGGTTCAAGTGtggctgcttttctttacagtaatgttaattttgTTTAATGGCTTTAGTAACTTGACACTTTGGGGCTCAAATGAAAAGATCATTAACAGggaacatttataaatggaagtatttatgatttgacactctttgaatgcttttaatTGTTCAGTTTCATATCAGTTTATGCCTTTGCATCTTGCTGTTCCAGTTTCAAGAAGTTAAGGAAGATAACTGGAAATGTGATAACGATACCAGATGATGGAGACCATATTTCCCCTACGCCGACAGACCATAGTGATGTCCTGCCCACCAGTGAACGACATCATGGACCTCTGGCCTGCTCTCAAAATAGAGTCTGAGTTGTATGCAGAGTTCCAGCGGATTACAAATCAGAACCTGCCCAACACGTGCTATGCTGAGCTTGACCACCATCTTCCTCTAATGATGACCTTATTCAGACAGAAGGCACCAATAACTGGGAAGACAGCAGATGCTCTGgctgaaatttaaaaaatccacgatgaacagGAACCAAAAATGGCAACGCCTAAAGAAGTCGTCTTAAGAACTTTACAAGACTTGGGAGCTGAGGATTTTGAAACATTCCACTGGTACCTACAGCTGAATGGCGGCCTTGAAGATTTCCCAGCAATCCCAAAGAGCAAACTGGAGAATGTAAACAGGGTGAAGACAGTGGACCTGATGTTCTCAACCCACAGTGTGAACACCATTAATGTGACCAGAATAGTTTTAGTGAAGATGAATCAGAATGAGTTAGGGAAGAATTTATCAAATTTATCAAACACCATCTCAGAACCTACAAATATTCTTGCTTCATGCCAGCAAAAAGTCAAATCCAACTCACAAaagaagttccagtgtgtgtttgaggggattgctaaagctGGAAACCCATcccttctgaatcagatgttcacagagatctacatcacaGACGGTGGGGCTAAAGAGGTCAatgatgaacatgaggtcagacagattgaaacagcatcctggagaccagacagaccagaaacaacaatcagatatgaagacatctttaaaactccacctggaagagatgaaccgatcagaacagtgatgactAAGGGAGTcgctggcatcgggaaaacagtcttaacacagaagttcactctggactgggctgaagacaaagccaaccaggacatccagttcacatttaCATTCgctttcagagagctgaatgtgctgaaagagaaaaagtacagcttggtggaacttgttcatTACTTCTtcagtgaaaccaaagaagcaggaatctacAGCTTTGAAGAGTTCccggttgtgttcatctttgacggtctggatgagtgtcgacttcctctggacttcctcaacactaaaatcctgactgatgttacagagtccacctcagtgggtgtgctgttgacaaacctcatcagggggaaactgcttccctctgctcgcctctggataaccacacgacctgcagcagccaatcagattcctcctgagtgtgttgacatggtgacagaggtcagagggttcactgaccctcagaaggaggagtacttcaggaagagattcagagatgaggagcaggccaacagaatcatctcccacatcaagacatcacaaagcctccacatcatgtgccacCTCCCaatcttctgctggatcactgctacagttctggaggacaTGTTGAagagcagagagggaggagagctgcccaagaccctgactgagatgtacatccacttcctggtggttcagtccaaacGGAAGAATGTCAAGTATGATGGAAAATTTGAGACTGATCCACACTGGAGTGAAGAGAACAGGAAGATAATCGAGTCCCTGGGAAAACTGGCCTTTGAGCAGCTTCAGAAAGGCAACCttatcttctatgaatcagacctgacagagtgtggcatcaACATCacagcagcctcagtgtactcaggagtgttcacgcagatctttaaagaggagagaggactgtaccaggacaaggtgttctgcttcgtccatctgagtgttcaggagtttctggctgctgtTCATGTCCACCTGACATTCaccaactctggagtcaacctgctATTGGAGAATTGGAAAACAACCTGGTTGTCTAAAGTCTTCAGAGACAAATCGGAACAAACAACATCAGCACAGTTCTACCAAagtgctgtggacaaggccttacagagtccaaatggacacctggacttgttcctccgccttctcctgggtctttcactggAGACCAATCAGACTCTCCTACGAGGTCtgctgacacagacaggaagtacgTTTGAGGCAAACAAGAAAACAGTTGAGCACATAAAGAAGAAGATTAATCagaatctgtctgcagagagaagcatcaatctgttccactgtctgaatgaactgaatgatcattctctagtggaggagatccaacagtccctgacatcaggaagtctctccacaggtaaactgtctcctgctcagtggtcagctctggtcttcatcatACTGTCTTCAGAGAAAGATCTGGAcatgtttgacctgaagaaatattGTGCTTCAGAGAAGGCTCTTCTGAtactgctgccagtggtcaaagcctccaacaaagctctGTTAAGTGGCTGTGAACTCTCTGAGACAAGTTGTGAAGCCCTGTcgtcagttctcagctcccagtcctccagtctgagagagctggacctgagtaacaacggcCTGAAGGATTCAGGAGCGAAGCTGGTGTCTCCTGGACTGAAGAGTCTAAactgcagactggaaactctcagACTGAGTGGCTgcaacctgtcagagagaagctgtgaagatctatcctcagttctcagctccaggtcctccagtctgagagagatggacctgagtaacaacgacctgaaggattcaggagtggAGCTGGTGTCTGCTGGACTGAGCAGttcacactgcagactggaaactctcagtctgtcaggctgtatGATCTCAGAGAAAGGCTGGATTACTCTGGCCTCAGCTTtgagctccaacccctcccatctgaaggagctggacctgagctataatcacccaggagactcaggagtgaagctgctgtcAGCAGGACTTAAGGACCCTAACTGgagactggaaactctcagGATGGACCATGGTGGACCGCAGAGGTTGAAACCTGGTCTgaggaagtgtggaggaggtggagatttgagaagcGCTATGCACGGGAGGTCCGGTCCAGAGACGGATATTGGATCACATTGATTCTTCAGATCCCAGAGTCTTCCAGGGGTTACTGATTCCCAGTTCAGTTTGCTGGGTGGCAGCTACAGGATCAAGACTCAGAACTTATACGGATTGCCCTGGATTCCTTCTTcatggtggtaggacaaacagaaaccaaactcatatgggccccaacgttgaacatctctcaactcttgtca

Function


GO:

id name namespace
GO:0005886 plasma membrane cellular_component
GO:0071944 cell periphery cellular_component

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
XM_039776779.1 True 5301 mRNA 0.45 10 8027405 8063338
XM_039776786.1 False 4116 mRNA 0.46 10 8022628 8063341

Neighbor


gene id symbol gene type direction distance location
LOC120551059 NA coding downstream 36201 7983094 ~ 7986427 (-)
LOC120551046 LOC106510929 coding downstream 307591 7712652 ~ 7715037 (-)
trnag-ucc NA coding downstream 512557 7510000 ~ 7510071 (-)
polr2d polr2d coding downstream 513483 7495033 ~ 7509145 (-)
LOC120543849 NA coding downstream 610121 7398193 ~ 7412507 (-)
LOC120543856 NA coding upstream 15883 8079224 ~ 8098464 (-)
LOC120543874 LOC101482597,LOC103360230,LOC107102854 coding upstream 306428 8369769 ~ 8392277 (-)
LOC120543728 NA coding upstream 559141 8622482 ~ 8638087 (-)
LOC120543940 NA coding upstream 619322 8682663 ~ 8684484 (-)
LOC120543840 LOC100693035,LOC101486393,LOC103152962,LOC103475253,LOC106951493 coding upstream 765072 8828413 ~ 8841376 (-)
G15353 NA non-coding downstream 122508 7872052 ~ 7900120 (-)
G15339 NA non-coding downstream 124724 7774441 ~ 7897904 (-)
G15356 NA non-coding downstream 135696 7886560 ~ 7886932 (-)
G15346 NA non-coding downstream 149565 7817442 ~ 7873063 (-)
G15350 NA non-coding downstream 165470 7848994 ~ 7857158 (-)
LOC120544065 NA non-coding upstream 8251 8071592 ~ 8072887 (-)
G15403 NA non-coding upstream 56174 8119515 ~ 8125709 (-)
G15428 NA non-coding upstream 191532 8254873 ~ 8255584 (-)
G15430 NA non-coding upstream 196810 8260151 ~ 8260686 (-)
G15439 NA non-coding upstream 261480 8324821 ~ 8325783 (-)
trnaa-cgc NA other downstream 86301 7936256 ~ 7936327 (-)
lrch3 lrch3 other downstream 678735 7309914 ~ 7343893 (-)
LOC120544114 NA other downstream 811262 7207735 ~ 7211366 (-)
LOC120543599 LOC102193948,LOC103360213,LOC102310147,LOC107834023,LOC106944350,LOC103473932 other downstream 823089 7142729 ~ 7199539 (-)
rpl35a rpl35a other downstream 886466 7129626 ~ 7136162 (-)
LOC120551075 LOC103475274,LOC105922519 other upstream 73960 8137301 ~ 8155303 (-)
G15757 NA other upstream 405016 8468357 ~ 8469760 (-)
G15771 NA other upstream 538576 8601917 ~ 8656963 (-)
LOC120544569 dgkd,LOC102780004 other upstream 628733 8692074 ~ 8742123 (-)
spint2 NA other upstream 817097 8880438 ~ 8914977 (-)

Expression



Co-expression Network