LOC120543718


Basic Information

Item Value
gene id LOC120543718
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 8429225 ~ 8469760 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039776897.1
TCACGGCGCCATCTTGGATCAAAGACAGCAGATTACCATCCGAACAGTTGTTGTTTAGTTTCAGACCGGACTCCATTAAACCAGGTTAAACCGCGCTAAACCGGATTAAACCGGGAACCTTTGTGTTGGGAGAGTACCGCGAGGCTGGTGATGGACCGGACCGAGCGCGCGGCCGTGATGAACCGGACCGAGCGCGCGACTGAGACGTTTGTGAGTCAAACGGAGCTGATTCTGGAGGCGGCTGTGCAGTCCGCCGTGCACGAGCTGCACGAGGACAGCACGGTGTCTGCGGTCCTGGCCCTGATGAGCAGGGCCGTCCTGCGCCAGGTGGTCCAGGTGTTCAGAGCGCTGTACGCCGGCCTGgtgaaggagaaccaggagctGCAGGAGAGACTGGCACATCTGGAGGAGaaacacaagacacagacaGTTTATCAGATCAAACCTTCAGGTGGCGCTGCGCTGTCTCTGAACGTTAACCAATCAGCTGCTGACCCCGCGGCCCTCGCCATGGCGATCATCCGCACCGCCAGACGCAGAGCTGCCGCCGCTGCCTCTCCGGTTCCTCTGGTCATCATCAGCCAACCAATCAGAGGCCAGAGCAGCCCCACCCCCCGGGAACCGCCGGAGAAACCACCACAATCTGAGGCTAACGCCAACACCACGGCTAACGCTAACACCACGGCTAATGCTAACACCACGGCTAACGCTAACACCACTGCTGAAGCTAACGGCACGGCTAACGCTAACACCACGGCTAACGCTAACACCACGGCGGATGAGAGTCAGACTGACGTTCAGATGGAGGTGGAGATAGAAACCATCTCCACAGACAtgatgacatcacttcctgtggcTGCTGACCAGCCAACCAGAGAGCTTTCAGCTGCGTCAGAAGCCCCGCCCACACCTGAAGCTGCTGCTCAGTGAGTGATTCGGACCAGAAGGATCTGGAGAGGAAGCGGCGGAGGGATCTGTACAAAGAGAAGCGGTTCTTCTGCGAGCTGTGTAACAAAGGTTTCCACCAGCAGCACCAGCTGAAGAAGCACGGGGCGTGCCACCTGAAGCCATTCCCCTGCAGCGCCTGCGATAAAGGTTTCTACAAAGCCAGCAGCCTGCAGCGCCACCAGCGCAGCCACGCTCTTCAGGCGGCGCAGGCCAGAGATCCCGACAGGATGCTGCGCTGCGAGCGCTGCGGCAAGAAGTTCCGGCAGGCGCGCCAGCTCCGAGCGCACCAGGCCTCGCACCGGCTGCAGGACACGCCGCTGCAGTGCAGTATCTGCCAGCGCAGCTACAGCTCGGCCGCCGCGCTGCGCTACCACCAAGTCTCACACGCTCAGGTGAAGCCCTTCTCATGTGATGTCTGTGGGAAAGGCTTCACCAGGAAGAAGAGTCTGCGTGAACACACAACGGTGCACACGGGCGCACGGCCGTACCCCTGCACCGCCTGCGGGAAACGCTTCTCCACCGCCAGCAACCTGCGCGTGCACAAGCGCTCGCACTCGGACGAGCGGCCGTTCCCATGCAGCGAGTGTGACAAAGCCTTCAAGAGTAAGATGGGGCTGCTGCAGCACCGCGTGGTCCACTCTGGGGAGAAACCCTTCATGTGTCAGACCTGCGGCCTCAGCTTCGGACTCAAGTACAACTTCCAGAGACACCTGCGCCTGCACAGCGGGGAGAAACCTCTCAGGTGTGCTAAATGTGGCGAGGGCTTCTCGGGGACGTGGGCTCTGAAGAAGCACATGCTGGTCCACGGCGTGGAGAAACCCTTCATGTGCGACCTGTGTGGGAAGACCTTCTTCTACAACTGCCAGCTGCAGAAGCACCAGACGCTGGTGCACGCTGCCCGGGAGCGCCCAGCGGTGGCGGGCGGCGCGGCCGTGGCCCGGCGGCGGCGTGCGAGCGGCGGGAAGCCTCTGAGCTGCGGCGTGTGTCTGAAGagcttcagcagcagcagcacgctGCGGACTCATCAGAAGATCCACGCAGACAACAAGGAGTTCAGCTGCGAGCGCTGCGGGAAGGCCTTCCACCTGCGCCACCTCTTCCTGTACCACCTGCGCACGCACAGCGGCGAGAGGCCGCACGCCTGCACCGTGTGCAGCAAGGGCTTCCTGCTGGCCTCGCAGCTGAAGCAGCACGCCATGCTGCACACCGGGGAGAAGCCGCACAAGTGCCCGACCTGCGGCAAAGCCTTCCGCACGCCGCAGAACTACCACCGCCACCGGCTGGTGCACACTGGAGAGAAACCCTACGAGTGCGCCATGTGCAGCAGGAAGTTCCGCCAGTCCAACCAGCTGAAGTCGCACATGCAGATCCACACGGGCGTCAAGCTGTACACCTGCCAGCGCTGCGGCGGAGGCTTCTCCGACTCTCGCCAGCTGAAGAAACATCGCTGTGGAGACGAGAGCCAGACAGACGCAAAGCAGACCAACGTCTTCCAGTGGAGCGATGGCTTCACGCAGCAATAAGACACGCTgcgttagcctagcttagcataaagactggaaacagtggAGCCATGGCTTCACACAGCAATAACACACGCTgcattagcctagcttagcataaacactGGAAACAGTGGAGCCATGGTTTCACACAGCAATAACACACGCTgcgttagcctagcttagcataaagactgaaaacagtgGAGCCATGGCTTCACACAGCAATAACACACGCTgcattagcctagcttagcataaacactGGAAACAGTGGAGCCATGGTTTCACACAGCAATAACACACGCTgcattagcctagcttagcataaagactgaaaacagtgGAGCCATGGCTTCACGCAGCAATAACACACGCTgcgttagcctagcttagcataaagacagaTAAATGTGTGGATTATTTTTTGGATGGTTGGATGAATTAACGACATGAAGAATGGATTATTTTCATTAGTGATTTATTATGAAATGTctatatttaaaatacaaagtGAGATCATTgtcttctttatttttaatctttaataagactgtttctgtctctctagaGTTTACTCACACAGCggggaaagtaactaagtactttGACTCCAGTTACTTTATACTTCACTACGTTGACTGTTATTGTTCCAGTGAATAAAACATTATGATATTGATAAGTTCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039776897.1 True 3137 mRNA 0.57 6 8429225 8469760

Neighbor

gene id symbol gene type direction distance location
nyap2a LOC103360223 coding upstream 6889 8399400 ~ 8422336 (+)
LOC120551081 NA coding upstream 122015 8244631 ~ 8307210 (+)
LOC120543907 NA coding upstream 303556 8123625 ~ 8125669 (+)
LOC120551067 NA coding upstream 310579 8115385 ~ 8118646 (+)
LOC120543651 NA coding upstream 738153 7679029 ~ 7691072 (+)
rnf168 NA coding downstream 77858 8547618 ~ 8566587 (+)
mindy4b NA coding downstream 789317 9259077 ~ 9275432 (+)
LOC120551113 NA coding downstream 813704 9283464 ~ 9301261 (+)
LOC120543803 NA coding downstream 839439 9309199 ~ 9315322 (+)
LOC120543792 NA coding downstream 839447 9309207 ~ 9329512 (+)
G15448 NA non-coding upstream 65979 8362900 ~ 8363246 (+)
G15447 NA non-coding upstream 75127 8353728 ~ 8354098 (+)
G15445 NA non-coding upstream 94747 8334185 ~ 8334478 (+)
G15421 NA non-coding upstream 215256 8213193 ~ 8213969 (+)
G15417 NA non-coding upstream 255413 8172664 ~ 8173812 (+)
G15471 NA non-coding downstream 8409 8478169 ~ 8478418 (+)
LOC120544094 NA non-coding downstream 12470 8482230 ~ 8483294 (+)
G15487 NA non-coding downstream 34057 8503817 ~ 8504154 (+)
G15491 NA non-coding downstream 42895 8512655 ~ 8702189 (+)
LOC120544074 NA non-coding downstream 61484 8531244 ~ 8534741 (+)
G15415 NA other upstream 256734 8170696 ~ 8172491 (+)
LOC120543711 LOC102298536 other upstream 536752 7858053 ~ 7892473 (+)
rffl rffl other upstream 575796 7806809 ~ 7853429 (+)
LOC120543808 NA other upstream 601138 7826610 ~ 7828087 (+)
G15234 NA other upstream 937168 7491365 ~ 7492057 (+)
LOC120543817 LOC104967478 other downstream 81831 8551591 ~ 8621654 (+)
LOC120544007 LOC106595375,LOC106565963,LOC106611916,LOC106588692,LOC106572435,LOC106612550,LOC106583987,LOC103477372 other downstream 326310 8796070 ~ 8808975 (+)
G15525 NA other downstream 379741 8849501 ~ 8850871 (+)
LOC120543609 LOC108250351,LOC108250349 other downstream 436970 8906730 ~ 9098564 (+)
G15540 NA other downstream 456832 8926592 ~ 8930270 (+)

Expression


Co-expression Network