LOC120543803


Basic Information

Item Value
gene id LOC120543803
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 9309199 ~ 9315322 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039777059.1
GCGAAGAGACGCACCGACAGACAGAAGctGCTCTCAGAGACAAAATGGCTTCCATGTCAGAGGAGGATTTCTGCTGTTCGGTCTGTCATGAAGTCTTTAGAGATCCTGTTGTTCTGTCatgtagccacagcttctgtaaagACTGTCTGAAGAGATGGTGGACAGAGAAACAGGCACAGGAGTGTCCAGTTTGTAAGAAAAGATCTTTGTTTGAACCACCTCGTAACCTGGAGTTGAAGAAGCTGTGTGAGACTTTCTTACagcagagagatcagagagcttcagaggctctctgcagtctgcactctgagaaactcaaactcttctgtctggaccatcagcagccagtgtgtCTCGTCTGTCTACATTCAGAAAAACACTCCAACCACACAATCAGACCCATAGATGAAGCTGCAGAGGATCACCGAGAGGAGCTCCAGGAAGCCCTGAAGCCCTTACAGGAGAAACTGAAGCTCTGTCAACAAGTTAAAGAGGAGTGTGATCAAACAGCAGAACACATGAAGGTCCAGGCCCAACGCACAGAGATGCAGATTAAGGATCAGTTTAAGAAGCTTCACCAGTttctagaagaggaagaggaggccaggatggctgcactgagggaggaagaggagcagaagagtcagaggatgaaggagaagatggaggctctgagcagagagatagcagctctttcagacacagtcagagccacagaggatcagctgagagctgaagacgtctcattcctgatcaactacgaggctgcagtggaaagagtccagcagagccccctgctggaggatccacagctgctctcaggagctctgatagatgaggccaaacacctgggcaacctgagcttcaacatctggaacaagatgaaggacatggtctcctacactcctctggttctggacccaaacactgctggtccagaactcatcctgtctgaagatctgaccagtgtgagactaagaaaggaggaggagcagcttCCTGATAATCCAGAGAGAATTGATTATTACTGCTCTgtcctgggctctgagggctttaactcagggactcacagctgggatgTCGAGGTTGGAGACAGTACATGCTGGGAACTGGGTGTGTTACCAGAGTCTGTACAGAGGAAGGGAGACATACAGTCTGAAATATGGACAATATGGTTCTCAGGTGGTAAATACTCAGCAGTGTCTCCGTCAGCTCCACGCACTGATCTCCCGTTTGAGAAGCAGCACCAGAGGATCCGAGTGACTCTGGTCTGGAACAGAGGAAAGCTGTTGTTCTCTGATCCTGATActaagacacacatacacaccttcacacacactttcactgagaagATGTTTCCATTCATTAACACTGTTGGCAATCTGAAGATATTACCATGGAAGGTTTGTGTAAGAAAACAACAGATCTGATAGAGTCTGTAGTTTTAGGGTGGTGATAACAACTATTCACTTCTTTAAACGTTAATGTGTTCCATCTTTTTATGAAGAAATAATATCTGAAGTGAAtgataaaattaattaaaacttTATATCTGCAGCAGCAAACAGTAACAGGAGTCAGCAGATTAAATATGAAAGAATATAAACAGAATAATGGTTAATTGCTCTGTTAAAGACGTAGTATACGATACTGAGCTTTATCCCAAGTTTTAgttctttttcaatgtttttgttgcctttgttTGATTCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039777059.1 True 1710 mRNA 0.46 2 9309199 9315322

Neighbor

gene id symbol gene type direction distance location
LOC120551113 NA coding upstream 7938 9283464 ~ 9301261 (+)
mindy4b NA coding upstream 33767 9259077 ~ 9275432 (+)
rnf168 NA coding upstream 742612 8547618 ~ 8566587 (+)
LOC120543718 NA coding upstream 839439 8429225 ~ 8469760 (+)
nyap2a LOC103360223 coding upstream 886863 8399400 ~ 8422336 (+)
LOC120543784 NA coding downstream 16245 9331567 ~ 9339168 (+)
LOC120551143 NA coding downstream 228697 9544019 ~ 9554616 (+)
LOC120547748 LOC100707466,LOC102206406,LOC103373746,LOC101483620,LOC102290800 coding downstream 287938 9603260 ~ 9625781 (+)
clip3 clip3 coding downstream 435309 9750631 ~ 9797726 (+)
trnar-ucu_10 NA coding downstream 554511 9869833 ~ 9869924 (+)
G15575 NA non-coding upstream 35363 9258426 ~ 9273836 (+)
LOC120544104 NA non-coding upstream 75234 9229697 ~ 9233965 (+)
G15571 NA non-coding upstream 133394 9172832 ~ 9175805 (+)
G15567 NA non-coding upstream 189844 9118637 ~ 9119355 (+)
G15543 NA non-coding upstream 357184 8950262 ~ 8952015 (+)
G15577 NA non-coding downstream 117040 9432362 ~ 9599857 (+)
G15629 NA non-coding downstream 169779 9485101 ~ 9506128 (+)
G15613 NA non-coding downstream 169879 9485201 ~ 9488596 (+)
G15632 NA non-coding downstream 202709 9518031 ~ 9653954 (+)
G15616 NA non-coding downstream 209593 9524915 ~ 9526067 (+)
G15565 NA other upstream 186907 9113842 ~ 9122292 (+)
LOC120543609 LOC108250351,LOC108250349 other upstream 210635 8906730 ~ 9098564 (+)
G15552 NA other upstream 217231 8994181 ~ 9091968 (+)
G15540 NA other upstream 378929 8926592 ~ 8930270 (+)
G15525 NA other upstream 458328 8849501 ~ 8850871 (+)
G15605 NA other downstream 58832 9374154 ~ 9378204 (+)
serp1 NA other downstream 96168 9411490 ~ 9485847 (+)
G15628 NA other downstream 143156 9458478 ~ 9459217 (+)
G15640 NA other downstream 282991 9598313 ~ 9669529 (+)
LOC120551159 fam13c other downstream 316069 9631391 ~ 9652831 (+)

Expression


Co-expression Network