LOC120543856


Basic Information

Item Value
gene id LOC120543856
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 8079224 ~ 8098464 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039777191.1
ttgtaaaattTCCTAAAGCTTTttattgtctgtgtgttcttgactttaatggacctgacagaaatTGAGCGTCAGCGTCAGTCCTGGCAGGCCAAGTAGTCAAGATGCCGCTAAACGCTATTGGCCAACAACACggtctcatcagctgatctgcatCAGCTGGTCAACTCCCCTCACTGCTAATAGGCTATGCTCAAACAGGGCGCCTTACTTAAAGCTGCATCAGTTTGCTCCTAATTTATTGCTGTTTTAGTGCTTGCAGCTTTATTTTGCTCTAACTGCTTGCTGCTCGCATCGTGCTACCCACCTCCTCCCCTGCTCCATCTTGTCGTAAGAgTGAACTATGGCCCAGTTTGTTGAAGACTCCAGCCTGGAGGACTGGGAGGAGATTGGCTCCGGGGGTTTTGGACAAATCTACAAAGCCAGGCATCATCAGTGGGGCATTGACGTAGCCATTAAAGTGCTTCTTAAGGACGAGGGgtCTTTGCTGCATGAGATCAATATGATGCATCAAGCCACCAGCCCGCATGTTATGGCCGTCCGAGGGATCTTCAAGGGTCGAACACCCTTTTCTGGCAGGTCAACAAAGCTTGGTGTGGTCATGGAGCTCATGAAGAGAGGATCATTGGCCTCCCTACAGGCAGCATTGAGGGGAACTCCACCCTGGCCGCTGGTCTTCAGACTGGCTCACCAAGTGGCTCTGGGTATAAACTACCTCCACAGTCTGCCCCGTCCTGTGCTCCACCAGGACCTGAAGCCCCAAAACGTGCTGCTGGACGATGCTCTCAATGCCAAGCTTACAGATTTTGGCCTTGCCCAGACTTCCTGCAGCATCACACTGGTTTCCAAGGACAATGGACCACGAGGAGGGACGCCTTACTACATGCCACCAGAGGCTTTTAACCCATCATACAGACCTTCCAGATCCTTTGATATCTACAGtTTTGGGATACTCCTTTGGTCCATTGTCACAGGGAAACAACCTTATGAAGTGGAGGGAGACCTCCCAAACCTGGATGATATCAAGGGCGATGTTGCCGGGTTGAGAGAGTTGAAAGAACTGATGAAGAGATGCTGGGATCCTAAACCTGAACAAAGGCCTAAAGCCCTTGAGTGTACAACTGAGACAGAACAACTGTTCAAGATGCACGAACATGAACTCAATAAAGCTGTCTATGAAGTGCTGATGAAACTGgaccaaaaggaaagaaaaggcaTGGCAGCAGGAAAGAAGGTTCGGAGGGATCAAATCGCTAAGGCTTCAGTGAAGGGGATCCAACAGGCAATGGGAAGATTGAGTCTGCCTCCTCTGGACCCTCTCAGGGTCCAGAGACGTGATCTGATGAGATattcctgtgaactcacactggacacaaacacagtgaac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039777191.1 True 1387 mRNA 0.50 12 8079224 8098464

Neighbor

gene id symbol gene type direction distance location
LOC120543635 NA coding downstream 15883 8022628 ~ 8063341 (-)
LOC120551059 NA coding downstream 92797 7983094 ~ 7986427 (-)
LOC120551046 LOC106510929 coding downstream 364187 7712652 ~ 7715037 (-)
trnag-ucc NA coding downstream 569153 7510000 ~ 7510071 (-)
polr2d polr2d coding downstream 570079 7495033 ~ 7509145 (-)
LOC120543874 LOC101482597,LOC103360230,LOC107102854 coding upstream 271305 8369769 ~ 8392277 (-)
LOC120543728 NA coding upstream 524018 8622482 ~ 8638087 (-)
LOC120543940 NA coding upstream 584199 8682663 ~ 8684484 (-)
LOC120543840 LOC100693035,LOC101486393,LOC103152962,LOC103475253,LOC106951493 coding upstream 729949 8828413 ~ 8841376 (-)
atg16l1 atg16l1 coding upstream 751026 8849490 ~ 8880046 (-)
LOC120544065 NA non-coding downstream 6337 8071592 ~ 8072887 (-)
G15353 NA non-coding downstream 179104 7872052 ~ 7900120 (-)
G15339 NA non-coding downstream 181320 7774441 ~ 7897904 (-)
G15356 NA non-coding downstream 192292 7886560 ~ 7886932 (-)
G15346 NA non-coding downstream 206161 7817442 ~ 7873063 (-)
G15403 NA non-coding upstream 21051 8119515 ~ 8125709 (-)
G15428 NA non-coding upstream 156409 8254873 ~ 8255584 (-)
G15430 NA non-coding upstream 161687 8260151 ~ 8260686 (-)
G15439 NA non-coding upstream 226357 8324821 ~ 8325783 (-)
G15446 NA non-coding upstream 240697 8339161 ~ 8339380 (-)
trnaa-cgc NA other downstream 142897 7936256 ~ 7936327 (-)
lrch3 lrch3 other downstream 735331 7309914 ~ 7343893 (-)
LOC120544114 NA other downstream 867858 7207735 ~ 7211366 (-)
LOC120543599 LOC102193948,LOC103360213,LOC102310147,LOC107834023,LOC106944350,LOC103473932 other downstream 879685 7142729 ~ 7199539 (-)
rpl35a rpl35a other downstream 943062 7129626 ~ 7136162 (-)
LOC120551075 LOC103475274,LOC105922519 other upstream 38837 8137301 ~ 8155303 (-)
G15757 NA other upstream 369893 8468357 ~ 8469760 (-)
G15771 NA other upstream 503453 8601917 ~ 8656963 (-)
LOC120544569 dgkd,LOC102780004 other upstream 593610 8692074 ~ 8742123 (-)
spint2 NA other upstream 781974 8880438 ~ 8914977 (-)

Expression


Co-expression Network