or55e1 (LOC104939064)


Basic Information

Item Value
gene id or55e1
gene name LOC104939064
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 6935046 ~ 6941434 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039777245.1
GAGTTCCTCCTGACGGCTGATGGACCTCAGCAGTTGCTTTAGGTGAAGCAGGCGCCATGTTGGAGGGGTCACTGGGTGGAAACTTCTCCCACATCACGTTCGTGTTCGGAGGTTTTCCTGAGCTGCAGAAACACCGCCGTCTGCTGGCGCTGCCGTTCTCCGCCTCCTACCTGACGGTGCTGCTGGGAAACTGTCTGCTGGTGTATGTGATCCGCAGCGTGGAGAGCCTGCACAGCCCCATGTACCTCCTCATCAGCACACTGTGCGTCGTCGACATGCTCGTAGCGACCGCCATCATCCCCAAAATACTCCTCGGCCTCCTCTTCGACTGGGACGAGATCTCGCTGGCCGGCTGCTTGACTCAGATGTTCTTCACGCACTTCCTCTCCTCGCTGGAGTCCACGTTGCTGCTGGCGATGGCGCTCGACCGATACGTGGCTATCTGCCAGCCGTTGCGCTACGCCAAAATCATCAACTCCTCCGCGTTGGCGAAGCTGCTGCCCTTTGCTCTGGTGCGCAGCGGCTCCATCATGGCGACGCTGGTCGCTTTGGCCGGTTCGCTGCGCTTCTGCAGCTCCGACATCATCAAGCACTGCTACTGTGACCACATGGCGCTGGTGAGCCTGGCATGCGGCAGCACGGAGAAAAACCGAGCGGCGGGACTCGCTGTGATCGTCTTCTTCGTGGGCGTGGACATACCGCTCATCTTCCTCTCCTACATGAAGATTTTGAGCGCGGTTTTGCGAGCGACAGCGGACAGCGAGGAACGCTGGAAGGCGTTCCACACGTGCGGCACTCACCTTATGGCCATGATGTGTTTCTACCTCGTGGGTAGCGTCACGTTCCTCTCGCACAACCTCAACATCCCCATACCGACGGACGCCAACACCTTCATGGGACTCGTTTACATTCTGTTCCCGGCGACGGCCAACCCCATCATCTACGGAGTTCGAACTAAAGAAATTCGGAATGTTTTTTTCAGGATTTTTAAAGTCAGAGTGAAGACAATAAGGAAGGTTTCTCCTGCTGGAAAAGGACAAACATGACCAAACATGCCTGTGAAAGTATGTGGTGTTTGTcatagacttaaaaaaaaaagaaaatgccaatCTTCTGATCCTGAAAAGTAAAGCCAATGTTGAAGTGCCTTCatataaattaattatttgaTTATATACATCTTACAGAAATGTGTAAAGTCATGTAGTTACTGAGTTTGTCCACGAGATGGTGGTTGATTTTTACAGCGAAAAAAGTCCCAAACACTTCAGATCACAATATCAAAAATGAGTTgatgttaaatattaaaaaataatacggTCTGATGTATCGTTACCTCAAAGCGTCAGAAACATCACGatgccaaaacacacacagacacacacacacacacaggttgccacaaacttattttttattaaatatgcaGAGGAATATATAGGTTTCCTTCTGgccctgtcaaaataaaagcccattCAAATAATATTAGAAATAATAAAGATGTTTTTGGGTGTCTTTAAAATCTTTTTATCCTGTAATGTttcagtgtcacacacacagacacagacacacacaccg

Function

NR:

description
olfactory receptor 51E2-like

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0050911 detection of chemical stimulus involved in sensory perception of smell biological_process
GO:0005886 plasma membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0004930 G protein-coupled receptor activity molecular_function
GO:0004984 olfactory receptor activity molecular_function

KEGG:

id description
K04257 OLFR; olfactory receptor

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039777245.1 True 1578 mRNA 0.49 2 6935046 6941434

Neighbor

gene id symbol gene type direction distance location
LOC120543617 NA coding upstream 5461 6913684 ~ 6929585 (+)
LOC120545568 LOC102303044,LOC101479096 coding upstream 23556 6910543 ~ 6911490 (+)
LOC120545541 NA coding upstream 35464 6898638 ~ 6899582 (+)
LOC120545533 LOC101478539 coding upstream 40549 6893550 ~ 6894497 (+)
LOC120545500 NA coding upstream 160101 6774016 ~ 6774945 (+)
LOC120545619 abcf3 coding downstream 424362 7365796 ~ 7396634 (+)
trnal-cag NA coding downstream 470396 7411830 ~ 7411912 (+)
LOC120543955 NA coding downstream 489509 7430943 ~ 7440997 (+)
ece2b LOC103361209,LOC101485402 coding downstream 593665 7535099 ~ 7570718 (+)
ano7 ano7,LOC103361833,LOC108228741 coding downstream 632290 7573724 ~ 7603726 (+)
LOC120572178 NA non-coding upstream 244155 6690031 ~ 6690891 (+)
G14939 NA non-coding upstream 356593 6578222 ~ 6578453 (+)
G14930 NA non-coding upstream 423160 6511135 ~ 6511886 (+)
G14928 NA non-coding upstream 425072 6508571 ~ 6509974 (+)
G14917 NA non-coding upstream 440396 6494388 ~ 6494650 (+)
G15012 NA non-coding downstream 2888 6944322 ~ 6991913 (+)
G15021 NA non-coding downstream 36365 6977799 ~ 6978105 (+)
G15032 NA non-coding downstream 75361 7016795 ~ 7017311 (+)
G15050 NA non-coding downstream 110752 7052186 ~ 7053965 (+)
G15028 NA non-coding downstream 151694 7093128 ~ 7093466 (+)
spcs2 spcs2 other upstream 517537 6407985 ~ 6417509 (+)
rnf169 NA other upstream 530621 6393062 ~ 6404425 (+)
G14344 NA other upstream 1406427 5510757 ~ 5528619 (+)
G14187 LOC107380983,LOC108250349,LOC108250351,LOC103477369,LOC103473932,LOC107835021,LOC106936810,LOC102294474,LOC102776571,LOC108229490,LOC103360213,LOC107834023,LOC103368570,LOC102214284,LOC102800009,LOC101480046,LOC101470105,LOC102792843 other upstream 1517911 4801340 ~ 5417135 (+)
G14209 LOC102792843 other upstream 2407669 4500173 ~ 4527377 (+)
G15019 NA other downstream 31411 6972845 ~ 6989396 (+)
G15173 LOC102077075 other downstream 456667 7398101 ~ 7399141 (+)
G15234 NA other downstream 549931 7491365 ~ 7492057 (+)
rffl rffl other downstream 865375 7806809 ~ 7853429 (+)
LOC120543808 NA other downstream 885176 7826610 ~ 7828087 (+)

Expression


Co-expression Network