LOC120543955


Basic Information

Item Value
gene id LOC120543955
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 7430943 ~ 7440997 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039777395.1
taATCCCAACGGGCTccatgtacactaacacagttctgTTGGTCGACAGACACTGATCATCTGGGTCCATAACtacacaccagtactcccctgcATCTTCCACTGACatattagagataaccaggcTCCCATTACTATAGTACCAGCTCACTCTGCTCATGCTCTCATTAGATGTTACAATGAtgattcttccctctgttcggtGTGACTTGATGAACCATTTATGCAGTATACCCTCTCCCCAATCTGtgcatctgagagtgacttcttctccctctgagaagagctctacaCTAGGGGGGCCAACTTTTGGGCACACCACCAGATAATACGTTTGCTCTCTCATAGAGACTGTACAGCTGTACCAacctgagtgatttaacattagagatgaaaacaccagcgagtagttttggtctactgaaggaacagtctggttGTTTAGTTTTGgttcagtgtgtgagtgtgttttggaATTAAACTTCTTCCAACGTGGGGGCTgttcatcagtggagtcagtgatagagcacggcaacacagcggtctctcccactgagcTGTTGATTATCTCATACCATGGTCTCAAACCTACAGTGtgactgctaacacactgctgttggttcatcaccagacatCTGTAGTCTCTAAAGTCTGTTGCTGTGACGTTGGAAACATGAAGAGCTGATGTGTCtgtcaccacttggtatcttcctctaacattgtccatcactgatgtcgTCTTGTCCCCAAAAACTCTGCTCCATGTTTCTTGCTCATATCTAGAGTCCAGTTTGAGCCACTGGATATCCAGATTATCAGCTGCTCCCTTACATGGCAGGTCCTCTGGTTCTCCAACTCTCTCTCTGATAAATCTCTTGTCTGTTGAAATagtacaaacagtaatagtgaTGTCATTCTCATGCGTCACCttgccctcagtccaacactcctctcggtaccggccggagtctgaatgggtcaggtcgaggatggtgtaagaagaagttttCACCGAGCTGACAAGTCGTTGTTTCAGGTGTTGAGGTACTGAGgagctgttggaccagaggtcagaggtgttccacaggacaagcttctcctcaccaacagatctggagatcaggcaggagtCGGTGttcttggggaggttgaaggtgTAAGAGTCTCCTTTCTCTCGGATGATGATCGGTTCTTGTGCATGGATGTAgttgatgagagcaaacagcaggaaggagagctctgtgactgcagccattctgctccgagACCGGGTCATGGGGGTGTCTCAGGTGTCTCCGGTTCTGTACCTCAGCGGGTTGGACTCGGCCCTGAACGCCGGCGTCCTCTCCAGCAGGAGCATCACGCTGATCGTTAACGCCAGCGGTCTGGAGGACGTGTCCTACCCGCCGCTGGACGGCCTGAGCGTCCTCCACGTCCCCGTCCAGGACCGTCCTCATGCTCCCCTCAGACGGTACTTCGACCCGGTGGCTGAACGGATCAACCAGAACCAGACGGGGAGGACTCTGGTCCACTGCACCGCCGGCCGGAGCCGATCCCCCGCCCTGATCATGGCCTACCTCATGAGGTTTGAGGGTCTCAGTCTGCGGCGGGCTCATGAAGTGGTTCTGGATCAGCGTCCGTTCATCCGGCCCAACGCAGGGTTCTGGCGACAGCTGATGGAGTACGAGCGCTCGCTGTTCGGCAGCAACAGCGTCCGGATGGCGAGAACGTCCGCCGGCGTTCTGCCCGAAGCTCTGCAGGATGACGCCGAGGCCGCGTACTGCGTCAACGTCTGACTCAGCAAACCACCACGGTCATAGGACCGACTTTTAAATCGGGTTTTTATCTCAGTAAGATGGGCCCACCCccttggggcggcctctagctcacccagtaagagcgtttgccccatgttggctgagtcctgcagcggcgcagggtatAAATCCGACGTGCtgcctttgctgtgtgtcatcccccatctctctcccccttt
>XM_039777404.1
cacagagcatcagcagcaggacactgagcactgagcatcgcactttgaagaagACCGGGTCATGGGGGTGTCTCAGGTGTCTCCGGTTCTGTACCTCAGCGGGTTGGACTCGGCCCTGAACGCCGGCGTCCTCTCCAGCAGGAGCATCACGCTGATCGTTAACGCCAGCGGTCTGGAGGACGTGTCCTACCCGCCGCTGGACGGCCTGAGCGTCCTCCACGTCCCCGTCCAGGACCGTCCTCATGCTCCCCTCAGACGGTACTTCGACCCGGTGGCTGAACGGATCAACCAGAACCAGACGGGGAGGACTCTGGTCCACTGCACCGCCGGCCGGAGCCGATCCCCCGCCCTGATCATGGCCTACCTCATGAGGTTTGAGGGTCTCAGTCTGCGGCGGGCTCATGAAGTGGTTCTGGATCAGCGTCCGTTCATCCGGCCCAACGCAGGGTTCTGGCGACAGCTGATGGAGTACGAGCGCTCGCTGTTCGGCAGCAACAGCGTCCGGATGGCGAGAACGTCCGCCGGCGTTCTGCCCGAAGCTCTGCAGGATGACGCCGAGGCCGCGTACTGCGTCAACGTCTGACTCAGCAAACCACCACGGTCATAGGACCGACTTTTAAATCGGGTTTTTATCTCAGTAAGATGGGCCCACCCccttggggcggcctctagctcacccagtaagagcgtttgccccatgttggctgagtcctgcagcggcgcagggtatAAATCCGACGTGCtgcctttgctgtgtgtcatcccccatctctctccccct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039777395.1 True 1996 mRNA 0.53 3 7431003 7440997
XM_039777404.1 False 781 mRNA 0.62 3 7430943 7440995

Neighbor

gene id symbol gene type direction distance location
trnal-cag NA coding upstream 19031 7411830 ~ 7411912 (+)
LOC120545619 abcf3 coding upstream 34309 7365796 ~ 7396634 (+)
or55e1 LOC104939064 coding upstream 489509 6935046 ~ 6941434 (+)
LOC120543617 NA coding upstream 501358 6913684 ~ 6929585 (+)
LOC120545568 LOC102303044,LOC101479096 coding upstream 519453 6910543 ~ 6911490 (+)
ece2b LOC103361209,LOC101485402 coding downstream 94102 7535099 ~ 7570718 (+)
ano7 ano7,LOC103361833,LOC108228741 coding downstream 132727 7573724 ~ 7603726 (+)
LOC120551040 NA coding downstream 171251 7612248 ~ 7640011 (+)
eif4h eif4h,LOC102797691 coding downstream 201557 7642554 ~ 7665150 (+)
LOC120543651 NA coding downstream 238032 7679029 ~ 7691072 (+)
G15174 NA non-coding upstream 28167 7400765 ~ 7402776 (+)
G15171 NA non-coding upstream 38633 7391413 ~ 7392310 (+)
LOC120544109 NA non-coding upstream 42261 7382638 ~ 7388682 (+)
G15156 NA non-coding upstream 69734 7326575 ~ 7361209 (+)
G15236 NA non-coding downstream 54063 7495060 ~ 7541926 (+)
G15243 NA non-coding downstream 226145 7667142 ~ 7745991 (+)
G15262 NA non-coding downstream 338260 7779257 ~ 7800890 (+)
G15267 NA non-coding downstream 342771 7783768 ~ 7839409 (+)
G15269 NA non-coding downstream 357840 7798837 ~ 7870287 (+)
G15173 LOC102077075 other upstream 31802 7398101 ~ 7399141 (+)
G15019 NA other upstream 441547 6972845 ~ 6989396 (+)
spcs2 spcs2 other upstream 1013434 6407985 ~ 6417509 (+)
rnf169 NA other upstream 1026518 6393062 ~ 6404425 (+)
G14344 NA other upstream 1902324 5510757 ~ 5528619 (+)
G15234 NA other downstream 50368 7491365 ~ 7492057 (+)
rffl rffl other downstream 365812 7806809 ~ 7853429 (+)
LOC120543808 NA other downstream 385613 7826610 ~ 7828087 (+)
LOC120543711 LOC102298536 other downstream 417056 7858053 ~ 7892473 (+)
G15415 NA other downstream 729699 8170696 ~ 8172491 (+)

Expression


Co-expression Network