LOC120544007 (LOC106595375,LOC106565963,LOC106611916,LOC106588692,LOC106572435,LOC106612550,LOC106583987,LOC103477372)


Basic Information

Item Value
gene id LOC120544007
gene name LOC106595375,LOC106565963,LOC106611916,LOC106588692,LOC106572435,LOC106612550,LOC106583987,LOC103477372
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 8796070 ~ 8808975 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039777493.1
CCATTCAACTGATGACCATTTAAACTCTGATTAACTTTAGTTGATAAAACAGCTGACGTGTAGCTTTGTGTCTGCTGATACGATAAACTAGGGCAGTAGTTATTAGACTTAGAGTTACTTTACATGAGGGTGTTGTTATTGAATAATTAAATACCACAAatgattttaaagttttattatATATCTGGACCAAAATGTACCTGGACAATAACAATCATGAAACAAACATATGGCTCCACCTGTTGACAGAGGGTTCCTGTGTgctgttctgtgtgtttgcagtctgtcaggctgtctgatctcagaggaaggctgttcttctctggtctcagctctgagctccaacccgtcccatctgagagagctggacctgagctacaataaTCTAGGAGACTTTGGAGTGAAGCTACTGTCAGCAGGACTGAAGGATCCTCTCTGGAGACTGAACACTCTCAGattcctgtgaactcacactggac
>XR_005636424.1
tgttacatattgtacctttaatatTCTGATATCTTTCAACaagagttaaatataaataacttgTTCCCTTCCTGTTGTGtctccagactgagtggctgtaatctgtcagagagaagctgtgaagctctgtcctcagttctcagctcccagtcctctagtctgagagagctggacctgattaacaacaacctgcaggattcaggagggaagctgatctcTGTTGGACTGACGAGTCCgcactgcacactggagactctcagtctgtcaggctgtctgatctcagaggaaggctgttcttctctggtctcagctctgagctccaacccgtcccatctgagagagctggacctgagctacaataaTCTAGGAGACTTTGGAGTGAAGCTACTGTCAGCAGGACTGAAGGATCCTCTCTGGAGACTGAACACTCTCAGggtggagcctgctggagtcagatggttgacaccaggtctgaggaagt
>XR_005636425.1
ttttaatgcagtaatgttacatattgtacctttaatatTCTGATATCTTTCAACaagagttaaatataaataacttgTTCCCTTCCTGTTGTGtctccagactgagtggctgtaatctgtcagagagaagctgtgaagctctgtcctcagttctcagctcccagtcctctagtctgagagagctggacctgattaacaacaacctgcaggattcaggagggaagctgatctcTGTTGGACTGACGAGTCCgcactgcacactggagactctcagtctgtcaggctgtctgatctcagaggaaggctgttcttctctggtctcagctctgagctccaacccgtcccatctgagagagctggacctgagctacaataaTCTAGGAGACTTTGGAGTGAAGCTACTGTCAGCAGGACTGAAGGATCCTCTCTGGAGACTGAACACTCTCAGGTTATCAACCTACTAACTAACTAAtcaactaactgactaactggaattaaataaaagaagtcAGAAGAAAATCGAGTTGTCCCTTGCGTCCTTTAGTCCTTAAAGAGGCCTTTTTCAAGTTTGGGCAAAGAGCTGAAGTGTGAACCATACACAACTTGACAGTTGATAACCGCACCGTGGCAGTGAAGACAAAAGGATTAACGGCCTGAAGTCAGGAAAGCTGTCGTCGCAGAGAGGAGGATTGACTGACATCTCAACATGGCGGAGGAAGCTCTTGGGAAAACAGTGAAGGAGCTGAAGCAAAAAAGAACTTTAGCTAAAAGGCGTTTTACCAAGCAGCAAACTTCCTCAGCAGAGGCGCAAAACACATGACTAAAAGAGAACTACAAGAGGAGTTCAAGAAGCTCACGTCAGAGGCGAGGAAGGTCAGTGAGACAAATAACGAATACAGGGCTGGCCTTCTGGCAGTCATTGAAGCTGAAACCGATGAGGGTGAAGAAGCAGAACTGAGCAAGCAGCATCAGACTGAACTTGAGAAGACGTTCCAAGAATGCAAAGCACGATTGGATGAGGTCAGGGAGAAGATCCAGTCCAATCTATGGCCTAGATATGGCAAAAACGAGGTCAAGTCTGCAATCCATGAAGCTGAGACAGCCTGTGATGGAGTTGCTCAAATACCTGAATGTTACAGCTGTAAACAGAGATGGCTACGAGCTACGGTGGGATAGTGCGAAAACACAAGTCCAAAATGCATTCACAAGCCTAGCAGAGTGGGAGATGTGAATTCCAGTGGCAGAAAAGGAATTGAAAAATTCTGCAAGCGTTGTGATCTCCAGCTCTCTTTCCTCACTCAGAGTCATTTCGTTGCCTCCTGGTTGACAATTGCCGCACCGGCATCCTCCACACTTCGGTTCGCAAGCTGCTCCAATGCTGTCCCATTCCCACCAATCCAAGAACTATCTGCGAGCAACTGTGCTTTTGGTTTCAGCTGTGCACTCTTGTGTTTTAGTTATCTCTTGATACTTTACAGCGGTTGCTCTCATGGATCGAGGAAATTATGTTTCAGACCTGAATAAACAGATCTGGATGTGCTCCACCAACAGTCTTTCCTAGCGGGCTCTCCCATAAGACAAGGTCTCCAATCACCTTCACTCTTTGCGGCGCAAGTCTTCCTTCGCGGTGGCTTATCAGTAGTTAAATTCTCTCCGGTCTCCTCAGATCTCCTAGATTGATTTCTGGGAAGAACTTCTTGAGTTGCTCAGGTTTGATGACTCTGTGGATGTTGGGAATTTCATTCAAACCATAGCAGACAAGCTCTGTGCCTCTTGGCATTTTGATCCTCACTCTGAGGAGATAACCTTCACGGCCATTCCTCCAACTCCTTGGACGACTAAAGTGATGTTTTCACTTCGGAGATTTAATCTCCTGGCAGCTCTGTTGTGATATAATTTGTGTCTGATGCCAAGTCGATCAGGGTTCCAATTGTTTGTCCTGCATTGGCAGTTACCTCGAGCGGCATTAGAATAACTGGCAATTCTTCTACTACACTTGACGCAATCTCTCCAAGCTGGATCTTTTCAACACAGTTCGTCTTTGCGGTGATGTTGGTGAACACTCTCTTGAATTTTTCCACCATCTCTGGGGAGAGCTTAGAAAGGACCAGTATGGTATGTCAGCCACTTGGTGGCACCAAACCCACACTCTGTCACAACACCTGTGCGACTGGTATGGAACAGCAGCTGGAAGTTTAAAGGGGTCAGCATGAATGACCTGCTGCTAAAAGGGCTTGATGTACTCAATCCCATCTGAGCAGTACtactcaggttcagaagaggtGTCCATGCTGCTCTTGGAGACATCAAAAAGATGTACAATTTGGTGTGGTTAGAAGACCTGGAAATGCACCTCCACAGATTTCTCTGGAGAAACACTGAGGAGGAAGAGATTGAAGAGTATGCCATCACCAGAGTCAACATTGGCGATCGACCAGCAGGGTGCATTGCACAACTGGCCATGAGAGAGACAGCAAAACTGCCCATGTTTGCTCACCTGGAGGAGGAACGTAGGATCCTTGAAGAGGATGCCTATGTCGATGACATCCTGACTTCCCATAATGACTTACAAAAGCTGGACAAGAACACTAAAAGAATTTAAGAGATCCTGAGGACAGGCGGATTCTTCCTCAAACCCTGGGTCCGGTCAGGCCAAAGTGGGAGGCAGGAGATCGTACCAGGAGAACAAGGAGCAGAGTCAAGCACAGTACTCTTTCTCCCAAACCAGATGAGGAAAGGAGACAATAAAGCCCTCGGAGTTGGATACCTTGTTGAAGAGGATAAACTGTACCCTATGACTTCAATCAATTTCtcaaagaggaaaaagaagatgaCCGTCGGAAAAAATCTCCTTGATGAAGAGGTGAGAGGGAAAACTCCAAACCCACTGATGAGAAGAGAACTGCTAAGCCAAGTAGCTAGCCTGTATGACCCAATAGGCCTCGTCACACCTGCCACAACAAAAGGGCGCCGTTCTTGTCAGAAAGGCGTTTCAAGAAGCTGGAGGCAAAACTGTGACCTGAGACACGTGGGACAAACCTCTGTCTGAATAATTGAGAGAAGAAGCCATCTAACTGTTTGAGGAATACACACGTCTTGGCCAAATCACCTTCCACAGAAGCCTCACACTAGTCAACTGGATTGGAAAACCATGGGGAATAACATTCTCTGATGGAAGTGATAAGAGCTATGGAGCCGTAGTGTACTTCAGATGGGGAACTGAGCAAGGCATCCAAGTATCAATGGTGAAATGTTTGGTGAAAAAGCATTTCACTGGAATTCCTTCATGGAAGAGGAGACTCTCATTCAGACACATTCAGCTCATTTGGGATTCTGGAGATGCAACCGggtggagcctgctggagtcagatggttgacaccaggtctgaggaagt
>XR_005636426.1
ttttaatgcagtaatgttacatattgtacctttaatatTCTGATATCTTTCAACaagagttaaatataaataacttgTTCCCTTCCTGTTGTGtctccagactgagtggctgtaatctgtcagagagaagctgtgaagctctgtcctcagttctcagctcccagtcctctagtctgagagagctggacctgattaacaacaacctgcaggattcaggagggaagctgatctcTGTTGGACTGACGAGTCCgcactgcacactggagactctcagtctgtcaggctgtctgatctcagaggaaggctgttcttctctggtctcagctctgagctccaacccgtcccatctgagagagctggacctgagctacaataaTCTAGGAGACTTTGGAGTGAAGCTACTGTCAGCAGGACTGAAGGATCCTCTCTGGAGACTGAACACTCTCAGGTTATCAACCTACTAACTAACTAAtcaactaactgactaactggaattaaataaaagaagtcAGAAGAAAATCGAGTTGTCCCTTGCGTCCTTTAGTCCTTAAAGAGGCCTTTTTCAAGTTTGGGCAAAGAGCTGAAGTGTGAACCATACACAACTTGACAGTTGATAACCGCACCGTGGCAGTGAAGACAAAAGGATTAACGGCCTGAAGTCAGGAAAGCTGTCGTCGCAGAGAGGAGGATTGACTGACATCTCAACATGGCGGAGGAAGCTCTTGGGAAAACAGTGAAGGAGCTGAAGCAAAAAAGAACTTTAGCTAAAAGGCGTTTTACCAAGCAGCAAACTTCCTCAGCAGAGGCGCAAAACACATGACTAAAAGAGAACTACAAGAGGAGTTCAAGAAGCTCACGTCAGAGGCGAGGAAGGTCAGTGAGACAAATAACGAATACAGGGCTGGCCTTCTGGCAGTCATTGAAGCTGAAACCGATGAGGGTGAAGAAGCAGAACTGAGCAAGCAGCATCAGACTGAACTTGAGAAGACGTTCCAAGAATGCAAAGCACGATTGGATGAGGTCAGGGAGAAGATCCAGTCCAATCTATGGCCTAGATATGGCAAAAACGAGGTCAAGTCTGCAATCCATGAAGCTGAGACAGCCTGTGATGGAGTTGCTCAAATACCTGAATGTTACAGCTGTAAACAGAGATGGCTACGAGCTACGGTGGGATAGTGCGAAAACACAAGTCCAAAATGCATTCACAAGCCTAGCAGAGTGGGAGATGTGAATTCCAGTGGCAGAAAAGGAATTGAAAAATTCTGCAAGCGTTGTGATCTCCAGCTCTCTTTCCTCACTCAGAGTCATTTCGTTGCCTCCTGGTTGACAATTGCCGCACCGGCATCCTCCACACTTCGGTTCGCAAGCTGCTCCAATGCTGTCCCATTCCCACCAATCCAAGAACTATCTGCGAGCAACTGTGCTTTTGGTTTCAGCTGTGCACTCTTGTGTTTTAGTTATCTCTTGATACTTTACAGCGGTTGCTCTCATGGATCGAGGAAATTATGTTTCAGACCTGAATAAACAGATCTGGATGTGCTCCACCAACAGTCTTTCCTAGCGGGCTCTCCCATAAGACAAGGTCTCCAATCACCTTCACTCTTTGCGGCGCAAGTCTTCCTTCGCGGTGGCTTATCAGTAGTTAAATTCTCTCCGGTCTCCTCAGATCTCCTAGATTGATTTCTGGGAAGAACTTCTTGAGTTGCTCAGGTTTGATGACTCTGTGGATGTTGGGAATTTCATTCAAACCATAGCAGACAAGCTCTGTGCCTCTTGGCATTTTGATCCTCACTCTGAGGAGATAACCTTCACGGCCATTCCTCCAACTCCTTGGACGACTAAAGTGATGTTTTCACTTCGGAGATTTAATCTCCTGGCAGCTCTGTTGTGATATAATTTGTGTCTGATGCCAAGTCGATCAGGGTTCCAATTGTTTGTCCTGCATTGGCAGTTACCTCGAGCGGCATTAGAATAACTGGCAATTCTTCTACTACACTTGACGCAATCTCTCCAAGCTGGATCTTTTCAACACAGTTCGTCTTTGCGGTGATGTTGGTGAACACTCTCTTGAATTTTTCCACCATCTCTGGGGAGAGCTTAGAAAGGACCAGTATGGTATGTCAGCCACTTGGTGGCACCAAACCCACACTCTGTCACAACACCTGTGCGACTGGTATGGAACAGCAGCTGGAAGTTTAAAGGGGTCAGCATGAATGACCTGCTGCTAAAAGGGCTTGATGTACTCAATCCCATCTGAGCAGTACtactcaggttcagaagaggtGTCCATGCTGCTCTTGGAGACATCAAAAAGATGTACAATTTGGTGTGGTTAGAAGACCTGGAAATGCACCTCCACAGATTTCTCTGGAGAAACACTGAGGAGGAAGAGATTGAAGAGTATGCCATCACCAGAGTCAACATTGGCGATCGACCAGCAGGGTGCATTGCACAACTGGCCATGAGAGAGACAGCAAAACTGCCCATGTTTGCTCACCTGGAGGAGGAACGTAGGATCCTTGAAGAGGATGCCTATGTCGATGACATCCTGACTTCCCATAATGACTTACAAAAGCTGGACAAGAACACTAAAAGAATTTAAGAGATCCTGAGGACAGGCGGATTCTTCCTCAAACCCTGGGTCCGGTCAGGCCAAAGTGGGAGGCAGGAGATCGTACCAGGAGAACAAGGAGCAGAGTCAAGCACAGTACTCTTTCTCCCAAACCAGATGAGGAAAGGAGACAATAAAGCCCTCGGAGTTGGATACCTTGTTGAAGAGGATAAACTGTACCCTATGACTTCAATCAATTTCtcaaagaggaaaaagaagatgaCCGTCGGAAAAAATCTCCTTGATGAAGAGGTGAGAGGGAAAACTCCAAACCCACTGATGAGAAGAGAACTGCTAAGCCAAGTAGCTAGCCTGTATGACCCAATAGGCCTCGTCACACCTGCCACAACAAAAGGGCGCCGTTCTTGTCAGAAAGGCGTTTCAAGAAGCTGGAGGCAAAACTGTGACCTGAGACACGTGGGACAAACCTCTGTCTGAATAATTGAGAGAAGAAGCCATCTAACTGTTTGAGGAATACACACGTCTTGGCCAAATCACCTTCCACAGAAGCCTCACACTAGTCAACTGGATTGGAAAACCATGGGGAATAACATTCTCTGATGGAAGTGATAAGAGCTATGGAGCCGTAGTGTACTTCAGATGGGGAACTGAGCAAGGCATCCAAGTATCAATGGTGAAATGTTTGGTGAAAAAGCATTTCACTGGAATTCCTTCATGGAAGAGGAGACTCTCATTCAGACACATTCAGCTCATTTGGGATTCTGGAGATGCAACCGcccgAATATGAAATGAGTAAATGCCAACCCTACCCCCTCCAACCCTgtgagtgatgtaatgcccctcccccccc

Function

NR:

description
PREDICTED: uncharacterized protein LOC106595375, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039777493.1 False 479 mRNA 0.42 2 8796360 8808975
XR_005636424.1 False 481 transcript 0.49 3 8796084 8808829
XR_005636425.1 False 3395 transcript 0.46 4 8796070 8808829
XR_005636426.1 True 3422 transcript 0.47 4 8796070 8808770

Neighbor

gene id symbol gene type direction distance location
rnf168 NA coding upstream 229483 8547618 ~ 8566587 (+)
LOC120543718 NA coding upstream 326310 8429225 ~ 8469760 (+)
nyap2a LOC103360223 coding upstream 373734 8399400 ~ 8422336 (+)
LOC120551081 NA coding upstream 488860 8244631 ~ 8307210 (+)
LOC120543907 NA coding upstream 670401 8123625 ~ 8125669 (+)
mindy4b NA coding downstream 450102 9259077 ~ 9275432 (+)
LOC120551113 NA coding downstream 474489 9283464 ~ 9301261 (+)
LOC120543803 NA coding downstream 500224 9309199 ~ 9315322 (+)
LOC120543792 NA coding downstream 500232 9309207 ~ 9329512 (+)
LOC120543784 NA coding downstream 522592 9331567 ~ 9339168 (+)
G15485 NA non-coding upstream 18122 8776638 ~ 8777948 (+)
G15519 NA non-coding upstream 41648 8751741 ~ 8754422 (+)
G15491 NA non-coding upstream 93881 8512655 ~ 8702189 (+)
G15507 NA non-coding upstream 95186 8690012 ~ 8700884 (+)
G15499 NA non-coding upstream 157647 8587277 ~ 8638423 (+)
G15524 NA non-coding downstream 24945 8833920 ~ 8834390 (+)
G15530 NA non-coding downstream 67245 8876220 ~ 8877550 (+)
LOC120544125 NA non-coding downstream 84528 8893503 ~ 8894393 (+)
LOC120544096 NA non-coding downstream 85502 8894477 ~ 8895255 (+)
G15517 NA non-coding downstream 90244 8899219 ~ 8899672 (+)
LOC120543817 LOC104967478 other upstream 174416 8551591 ~ 8621654 (+)
G15415 NA other upstream 623579 8170696 ~ 8172491 (+)
LOC120543711 LOC102298536 other upstream 903597 7858053 ~ 7892473 (+)
rffl rffl other upstream 942641 7806809 ~ 7853429 (+)
LOC120543808 NA other upstream 967983 7826610 ~ 7828087 (+)
G15525 NA other downstream 40526 8849501 ~ 8850871 (+)
LOC120543609 LOC108250351,LOC108250349 other downstream 97755 8906730 ~ 9098564 (+)
G15540 NA other downstream 117617 8926592 ~ 8930270 (+)
G15552 NA other downstream 185206 8994181 ~ 9091968 (+)
G15565 NA other downstream 304867 9113842 ~ 9122292 (+)

Expression


Co-expression Network