serpini1 (serpini1)


Basic Information

Item Value
gene id serpini1
gene name serpini1
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 24336057 ~ 24355496 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039778017.1
GAGGGGGCGGGGTCTGCGGCAAGCATCAAGCTGAGTGCGGCGCTCTAGGagaacagcagagagagaccgcacacatccatccatccaccctaCCTATCAGCGTTTATCGTCCGCACATCCCTTTTCACTCAGCTATCTGTGGTCTGCGCTGCGATGTTGATTCTGGACGTTTTCTCaccgctcctcctcctctccatcctgTTGCCGCGCTACGGTTGCCGGGTGGCGGAGATTCCAGAGGACACTACAGCAGAGTTCTCGGTCAGACTGTACCATCGGCTGCAGGCGGCGGGGGATCAGGATAACATCATTTTCTCCCCGCTGAGCGTGGCTGTGGCCCTGGGCATGGTGCAGCTGGGAGCCAGAGGGGCTTCACTGGAGGAGATACGACAGGCTGTAGGATTCAGCCACCTGCTGCCAGGCATGGAGTTCTCTTTGCTCCAGAACCTGACAGCAGCGCTGTCGGACGATGACACCCACTATGTTATCCGATTTGCCAACAGCCTCTTCCTGCAGGAAGGCGTCACCTTTAACCCTGAGTTTCTGCATCTGATGAGGAAGTACTTTCGGGCTGACGTGGAAACAGTAGACTTCAGCGAATCAGCAGCCGTGGCCGAGCAGATCAACAGCTGGGTGGAAAATCATACTGAGAGTAAGATCCGTGAGCTGCTATCAGCCGAGGACTTTAGCAGCGTGACCCGCCTGACCCTTGTGAACGCTGTCTACTTCAGAGGCTCCTGGAAAAACCAGTTCAGGCCAGAAAACACCAGAACCTTCTCCTTCAGCAGAGACGACGGCTCTGAAGTCCAGACACTCATGATGTACCAGCAGGGAGACTTCTACTATGGCGAGTTCAGCGATGGCTCACAGGAAGCTGGCGGTGTGTACCAGGTGTTGGAGATGCCCTATGAGGGCGAGGACATGTCCATGTTGATCGTTCTGCCTCGGCAGGAGGTGCCACTGGCTACCCTGGAGCCCATAATCAAAGCACCACTGCTGGAGGAGTGGGCTAATAATGTCAAACGGCAGAAGGTGGAAGTCTACCTACCTAGGTTCAAAGTGGAACAGAAGATCGACCTGAGGAGCACTCTGCAGGAGCTAGGAATAAAGAACATCTTCACTAACGATGCTGATCTCTCCGCCATGACAGATGGTAAGGACCTTTACATTGGGAAGGCAGTGCAGAAGGCTTACCTGGAAGTGACTGAAGAGGGGGCAGAAGGAGCCGTTGGGTCAGgaATGATTGCCCTGACCAGGACTCTGGTGCTGTACCCACAGGTCATGGCTGATCACCCATTCTTCTTTGTCATTAGAAACCGgaggacagGGTCAATCCTCTTCATGGGCAGGGTCATGACCCCTGAAGTCATTGAGCCCAACGACCATGACTTTGACTCCATGTAACCACGGTGGGAGGTCCCTCAATCTCAGCCTATCTGATCCTGACGTCATAAACACTACCTATCTTCTATTGCCATCTTCAGCGGTGTTTTATACtcttaaaagaaatatatacaaaatgaatattataccatatattatatattgaaaTATGACATACAACATATAGCGTGACTGTGTTTTGATACTGGAAGCTTTAATCTCTTGGACACAGACATGTAGAAAGAGGAAGTTGTACATATTCTCTGGTAAAGGACAGTTTGTAAATGAGTAAGGAAAACACATGATATGTAATCCACGCACAACCCCTTTAAGTTCAGCAGCTTCGTCCTCACTTGtgcccacacacacaatgcacaaaaaTAGTTTTCTCTCTACTTCTAAAAGAAATATCTACTCTTTCTTACTACAATTACAGTGTGTGCACACTATACGGTTCACACTTTAATTATATCCCTGTGCATTTGACATTGTGTtctatatatacaaatatatacccTGTATTTATTGCAGAATAAATGTGCAAACATTTTGTCCCTATACAATGAATCTTAGTAATACATCTGTTCCAGACAGTATTctagtcattttttttacactgcagGCACATGGCTGAACTGCTGATGAACTAATATGCCTTATCAAATCTGAGTGGTTGATTAAGCCCCAGCTGGGCATCTCACAGGTGAGCAGAGGGGACTGCAACTAAGGTGGGTTGCTATATATCTCATGCAGGCGCACTGAAAAAATCTGCTGCACCGTTTTGGATGTACATACAGGGAGAAACAGTAACACCAGCTGTATTCAGTCTTTTActcaataaatacatgaatgtgTTCCCATTAA

Function

symbol description
serpini1 Predicted to enable serine-type endopeptidase inhibitor activity. Predicted to be involved in negative regulation of endopeptidase activity. Predicted to be active in extracellular space. Is expressed in hypothalamus; lapillus; midbrain; otolith; and telencephalon. Human ortholog(s) of this gene implicated in familial encephalopathy with neuroserpin inclusion bodies. Orthologous to human SERPINI1 (serpin family I member 1).

NR:

description
PREDICTED: neuroserpin

GO:

id name namespace
GO:0005615 extracellular space cellular_component

KEGG:

id description
K23412 SERPINI1; neuroserpin

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039778017.1 True 2247 mRNA 0.48 9 24336057 24355496

Neighbor

gene id symbol gene type direction distance location
LOC120551456 LOC102079500,LOC107380520,LOC101465397 coding downstream 4861 24327466 ~ 24331196 (-)
veph1 veph1,LOC106613251 coding downstream 54222 24191471 ~ 24281835 (-)
ssr3 ssr3,LOC106581450 coding downstream 371590 23960754 ~ 23964467 (-)
tubd1 tubd1,LOC102795212 coding downstream 543081 23788779 ~ 23792976 (-)
dscamb dscam,LOC103377590 coding downstream 642680 23574700 ~ 23693377 (-)
si si,LOC107380514 coding upstream 469527 24825023 ~ 24921452 (-)
slitrk3a slitrk3,LOC102777956 coding upstream 594879 24950375 ~ 24958185 (-)
LOC120573181 LOC104958666 coding upstream 687268 25042764 ~ 25050773 (-)
megf6 LOC100699370,LOC101470445,LOC102198030,LOC103366731,LOC102307182 coding upstream 1284483 25639979 ~ 25699538 (-)
dnaaf1 NA coding upstream 1353296 25708792 ~ 25711415 (-)
LOC120547017 NA non-coding downstream 9020 24314587 ~ 24327037 (-)
G19272 NA non-coding downstream 115936 24203069 ~ 24220121 (-)
G19264 ccnl1 non-coding downstream 157181 24170761 ~ 24178876 (-)
G19224 NA non-coding downstream 170759 24165078 ~ 24165298 (-)
G19191 NA non-coding downstream 304804 24028627 ~ 24031253 (-)
G19293 NA non-coding upstream 42313 24397809 ~ 24398780 (-)
G19319 NA non-coding upstream 260050 24615546 ~ 24615779 (-)
G19320 NA non-coding upstream 295071 24650567 ~ 24651550 (-)
G19331 NA non-coding upstream 362830 24718326 ~ 24718561 (-)
G19332 NA non-coding upstream 363121 24718617 ~ 24719077 (-)
G19270 ptx3 other downstream 83144 24248031 ~ 24252913 (-)
G19140 gmps,LOC102797084 other downstream 508103 23823821 ~ 23827954 (-)
slc33a1 slc33a1 other downstream 526605 23802515 ~ 23809452 (-)
atm atm,LOC102794456 other downstream 577231 23729488 ~ 23758826 (-)
LOC120574680 NA other downstream 875013 23453547 ~ 23461044 (-)
trip12 trip12 other upstream 1685799 26041295 ~ 26089702 (-)
LOC120570356 ypelc,ypel2,LOC106931471,LOC106940241,LOC101067200,LOC107659943,LOC106603438,LOC107599611,LOC101078269,LOC104940871 other upstream 1951568 26307064 ~ 26334719 (-)
LOC120570434 fam124b other upstream 2078785 26434281 ~ 26445935 (-)
cul3b cul3,LOC104924156,LOC100710156,LOC107099750,LOC108240497,LOC104940878,LOC103474461,LOC108428259,LOC102194569,LOC101170875 other upstream 2095884 26451380 ~ 26469896 (-)
G19840 NA other upstream 2733110 27088606 ~ 27089064 (-)

Expression


Co-expression Network