LOC120544420 (bach1)


Basic Information

Item Value
gene id LOC120544420
gene name bach1
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 40227369 ~ 40260253 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039778146.1
GCGCTTGCCCTGAGCATGCGCAGTAAGTGTTGACAGCTTTTCCGGTTTCACATTGTCACATGACGTGAGGAATCGATGGCCAGAAACTAACATCTCTACCCAAAATTTACCAATGGCAGTGTTATCAAGCTGACATGGCAGGCTGAGCTTGTAAGAACCATGCCGCTCCAAGATCATCGCATGTCAGTGTTCACCTTTCAGTCTGCAGTGCACAGCGCCCATGTTCTCCAGTGTCTGAATGACCAGAGGCAGCGTGACGTCCTGTGTGATGTGACGGTGGCGGTGGAAAACCAGAGTTTTCGGGCCCACTGCTCTGTCTTGGCTTCCTGCAGTGAATACTTTCACAGCAGAGTTACCAGTGTCACCAGACATAATCCCATCATCACCTTGCCTGATGAGGTGACCGTTGAGGGGTTTGAACCTTTGCTTCAATTTGCCTACACCTCGAAGCTGCCTTTCACTAAAGAAAATATTCATGCCATTCACAGCAGTGCTGAGATTTTAGGATTCCATAACTTGGAGTCGGCATGCTTTGATTTTCTCATTCCAAAGTTTTCTGAAGGCAGAAGAACCTCACGGGATGTCAGGCATAGAGCCTGTTGTCTGAGTCAGAATCCCAGTGCCAGTTTTGGCCCCAGCGTAGAGAGCAGCCAACCAAAATCATTTGAGTCACACAGCTCAGTGCCTTCAAGTGTTGATGAACAGACAGATTTCCCATCACAGTGTCCTCAGAGTACACAGGGTCAGACCAACAGCGGGGAAGAACACTTCTGTTTGGAGAACTGTGGGCCACAAATGGCCCCCTTAACTCTGGAGTTAACAGCGAATGGTGTGTGCCCCATGTTGTCTTTGCCGTGCCCAGACTCTGATAAAGCAGATCAACCCTCTCAGTTCAGCGAAAGAGACATTTTAGAGATAGGAGATGTGTGTAATCAAAGTGAGTTGAGTTTGACAGACTGTGACTTACCCTGTGAGTTGCCAAGCCCAGGGGATGGGAATCCACCAGAACTCACTGAGCCAGCAGGCAGAGATGTTAAGCAGACTGTTGAGACGCTTCGTGCTGAAACCGACTGCAACCCCGGTTCATGTCCACTCGCAGCAGGGGCAGAATATTGCCGTGAGTTATTAGAGCAGAGTAAGGCTGGCCTTGAACCCAAAATGGAAGGTGATCTCTCAGACTCTACACCAACTGATCTAAGCCACACAGAGGGAATTGGGGAGAGGAGCAGTGAGGAGAGGGAGGTGGCTGAACATCTGGCTAAGGGATTTTGGTCTGACCTATGCCCATCTCAGGCTCAACCACCCCCCTTGGAGCCCATGGACCAAAACAATCTGGCAAAAGCATCAGACTTTCATTGGCTTAAGCAGCTGGACCTGAGCTCCAGTGTAGGAGACTGTCCCTTCCTCAGGGACTTTGGGTCAGGTGATGACCCGGCCCCACGCACTGACAGCCTGTCCCAGTCAGAGAAGAGCCCCTACATGTCCTCCTCGCTCAACTCTGGGGACGACTCAGACCTGGACACGGATGGAGATACTGAGGCCAACAACAAAAGAGCAGCAGAGATTCAACTCCCATTCCCGGTGGAGCAGATCTCAGCGCTGAGCCGGGGTGCCTTCCAGCAGCTTCTGAGACAACATCAGCTGACTCAAGATCAGCAGGAGTTTGTCCATGACGTCCGTCGACGAAGCAAAAACCGCGTGGCTGCACAGCGCTGCCGAAAGAGGAAATTAGACAGCATACACCACCTAGAATGTGAAATCAAAAAATTGAAAAGTCAGAAAGAGCGGCTGCTGCAGGAGCGAACTGAGTTGGAGCAAAACCTGGAGGAGACGAGGCAGAGTCTGTGCGGGTTATGTAAGAGTGTCAGCATCGAGTCTGGCTCTGATCAGGACCACTTGGAGCTTCTTGCCAAGGTCTCCTCATCAGACTCCCCCATCTCCTCCCATAGCCTTTTGGATGAAGATGAGGAGTCCCAGATCACTATCGAAATGGTAAGTTGTTCTTCAGAGTGTGACCCGAGCAAGCCGCCTGCATGCTCAGTTCAAACTGCTGCACCAGAGGCTGGCACACAGACAAAGGAGGCAGGCTCTCCACAGAGTTGCCCCGTTCCCGCATCTCTGCTCAATGTCTGTCTGGACGTGAACAACAGCTTATAATTGGACTCGGTTTCCAATGTCATTTCTAATCTTGCAGGCCCACGGAGCAGGGGATGGACTCTTGAGTATATACTGTAATCCTCTTTTGGGATAGATATGCTTTCCTGTGTATTTCACTGAATGGTTTTCTGCCTTATAAAGTGACAGAGTACTTTGCTGTGTTTCTAATATGCATTTCACTGTAGTAAATACACAATCCATTATTCAACAGTTTGAAAGTGCACACAATTTTCAGGTAATTCCCAAATGTTTTTCTCAGGGAAACTCATAACCTGACTATGTTTTGATGGCTAACATAATTCtcgctacaaacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagttataaaaATTAGACCTTTCTTTAATTTAGGCTAATTAGTCTATccttaatataatataataatcttAACACATTCTGTATTATTTTACCACTATGCTATTACTTTAATTCAATATGCATAGCACTAACATCTTTTACAGTAGATAACAAGGAATTGTTGCAGGTAACATGAATTCTCAACAgcattatttgattattttttgggcattttaggcctttatatatatatatatatatatatatagcaaagGGCCGCACGGCAGAgttgaacccgcggccgctgcgtcgaggagtaaacctctatgtgCGTAGTTTGAATGAATTACTGTCAGCTTCCCCTGATATTTGAGGAATAGTTCCAGTGTATCTGAAAGTGTTACAGGGGGAACATAGGAAATGATTTTATTTGATGAAAAATGTGCCTTATGCAGTAGTATAGTATGAAGACAGAAAGATAAAGGCAAACTTTATCATTGAAATTGTCAATTCTTGTGACAAGCACCATTGCACATTAACTCAGAACCTATACTTTCTTTTGCGTTACAGTCTGTCTTCATGTTGAGTATTTTTTATTGAATGCTTTCATGGATTACagatttaaataaacattttgttacca
>XM_039778154.1
GCGCTTGCCCTGAGCATGCGCAGTAAGTGTTGACAGCTTTTCCGGTTTCACATTGTCACATGACGTGAGGAATCGATGGCCAGAAACTAACATCTCTACCCAAAATTTACCAATGGCAGTGTTATCAAGCTGACATGGCAGGCTGAGCTTGTAAGAACCATGCCGCTCCAAGATCATCGCATGTCAGTGTTCACCTTTCAGTCTGCAGTGCACAGCGCCCATGTTCTCCAGTGTCTGAATGACCAGAGGCAGCGTGACGTCCTGTGTGATGTGACGGTGGCGGTGGAAAACCAGAGTTTTCGGGCCCACTGCTCTGTCTTGGCTTCCTGCAGTGAATACTTTCACAGCAGAGTTACCAGTGTCACCAGACATAATCCCATCATCACCTTGCCTGATGAGGTGACCGTTGAGGGGTTTGAACCTTTGCTTCAATTTGCCTACACCTCGAAGCTGCCTTTCACTAAAGAAAATATTCATGCCATTCACAGCAGTGCTGAGATTTTAGGATTCCATAACTTGGAGTCGGCATGCTTTGATTTTCTCATTCCAAAGTTTTCTGAAGGCAGAAGAACCTCACGGGATGTCAGGCATAGAGCCTGTTGTCTGAGTCAGAATCCCAGTGCCAGTTTTGGCCCCAGCGTAGAGAGCAGCCAACCAAAATCATTTGAGTCACACAGCTCAGTGCCTTCAAGTGTTGATGAACAGACAGATTTCCCATCACAGTGTCCTCAGAGTACACAGGGTCAGACCAACAGCGGGGAAGAACACTTCTGTTTGGAGAACTGTGGGCCACAAATGGCCCCCTTAACTCTGGAGTTAACAGCGAATGGTGTGTGCCCCATGTTGTCTTTGCCGTGCCCAGACTCTGATAAAGCAGATCAACCCTCTCAGTTCAGCGAAAGAGACATTTTAGAGATAGGAGATGTGTGTAATCAAAGTGAGTTGAGTTTGACAGACTGTGACTTACCCTGTGAGTTGCCAAGCCCAGGGGATGGGAATCCACCAGAACTCACTGAGCCAGCAGGCAGAGATGTTAAGCAGACTGTTGAGACGCTTCGTGCTGAAACCGACTGCAACCCCGGTTCATGTCCACTCGCAGCAGGGGCAGAATATTGCCGTGAGTTATTAGAGCAGAGTAAGGCTGGCCTTGAACCCAAAATGGAAGGTGATCTCTCAGACTCTACACCAACTGATCTAAGCCACACAGAGGGAATTGGGGAGAGGAGCAGTGAGGAGAGGGAGGTGGCTGAACATCTGGCTAAGGGATTTTGGTCTGACCTATGCCCATCTCAGGCTCAACCACCCCCCTTGGAGCCCATGGACCAAAACAATCTGGCAAAAGCATCAGACTTTCATTGGCTTAAGCAGCTGGACCTGAGCTCCAGTGTAGGAGACTGTCCCTTCCTCAGGGACTTTGGGTCAGGTGATGACCCGGCCCCACGCACTGACAGCCTGTCCCAGTCAGAGAAGAGCCCCTACATGTCCTCCTCGCTCAACTCTGGGGACGACTCAGACCTGGACACGGATGGAGATACTGAGGCCAACAACAAAAGAGCAGCAGAGATTCAACTCCCATTCCCGGTGGAGCAGATCTCAGCGCTGAGCCGGGGTGCCTTCCAGCAGCTTCTGAGACAACATCAGCTGACTCAAGATCAGCAGGAGTTTGTCCATGACGTCCGTCGACGAAGCAAAAACCGCGTGGCTGCACAGCGCTGCCGAAAGAGGAAATTAGACAGCATACACCACCTAGAATGTGAAATCAAAAAATTGAAAAGTCAGAAAGAGCGGCTGCTGCAGGAGCGAACTGAGTTGGAGCAAAACCTGGAGGAGACGAGGCAGAGTCTGTGCGGGTTATGTAAGAGTGTCAGCATCGAGTCTGGCTCTGATCAGGACCACTTGGAGCTTCTTGCCAAGGTCTCCTCATCAGACTCCCCCATCTCCTCCCATAGCCTTTTGGATGAAGATGAGGAGTCCCAGATCACTATCGAAATGGCACACCACAAACATTATTCTATATATGAAGATGATGGTTGAAGGTGCTCCACCAAAGGGGACATTCTGCCAGAGGACGTGCATCTTTACTTCCTGTTGGCAGCTGGCGGATCTTGATTTTAATGCTGTATCTGGATGGAGCTTTGATCAACTCTTGCAAACGAATCAGTCCTTAAATTAAAAGAAGACAAGAAGAC

Function

symbol description
bach1 Enables DNA-binding transcription repressor activity, RNA polymerase II-specific. Involved in DNA repair and regulation of transcription, DNA-templated. Located in nucleus. Colocalizes with cytosol.

NR:

description
PREDICTED: transcription regulator protein BACH1 isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039778146.1 True 3173 mRNA 0.46 5 40253953 40260253
XM_039778154.1 False 2189 mRNA 0.50 7 40227369 40260253

Neighbor

gene id symbol gene type direction distance location
LOC120546558 LOC103363424,LOC104943694 coding downstream 314609 39904112 ~ 39912760 (-)
LOC120546419 LOC104923287,LOC104947775,LOC103363426,LOC101479268 coding downstream 325922 39868408 ~ 39901447 (-)
LOC120546408 NA coding downstream 326118 39892209 ~ 39901251 (-)
LOC120546381 LOC103363428,LOC101062185,LOC102204297 coding downstream 449449 39759961 ~ 39777920 (-)
LOC120546392 NA coding downstream 470791 39735716 ~ 39756578 (-)
usp16 NA coding upstream 107 40260360 ~ 40268274 (-)
stoml3a stoml3,LOC104925222,LOC101073007,LOC105935001 coding upstream 564500 40824753 ~ 40832594 (-)
slc25a15a slc25a15,LOC103152068,LOC106945435,LOC103475195 coding upstream 575415 40835668 ~ 40844838 (-)
cog6 cog6,LOC102796367 coding upstream 663772 40924025 ~ 40955064 (-)
trnak-uuu_7 NA coding upstream 771553 41031806 ~ 41031878 (-)
LOC120544464 NA non-coding downstream 1050 40184747 ~ 40226319 (-)
G22826 NA non-coding downstream 302918 39924213 ~ 39924451 (-)
G22811 LOC104947776 non-coding downstream 359882 39864821 ~ 39867487 (-)
G22818 NA non-coding downstream 369583 39857436 ~ 39857786 (-)
G22816 LOC101479746,LOC102301626,LOC102203644,LOC100692726,LOC102798843 non-coding downstream 372775 39854280 ~ 39854594 (-)
G22936 NA non-coding upstream 27385 40287638 ~ 40287869 (-)
G22962 NA non-coding upstream 131095 40391348 ~ 40489408 (-)
LOC120545373 NA non-coding upstream 265316 40525569 ~ 40561333 (-)
LOC120545377 NA non-coding upstream 266743 40526996 ~ 40531357 (-)
G22972 NA non-coding upstream 271165 40531418 ~ 40536651 (-)
LOC120546248 LOC103363423,LOC101478053,LOC102201911,LOC102303851 other downstream 194213 39943571 ~ 40033156 (-)
LOC120570635 sel1l3,LOC103353588 other downstream 1491546 38727508 ~ 38735823 (-)
robo2 NA other downstream 1578770 38353024 ~ 38648599 (-)
p4ha3 p4ha3 other downstream 2481087 37732841 ~ 37746282 (-)
LOC120571840 LOC103356713,LOC100701072,LOC102300918,LOC101484608,LOC102193268 other downstream 2529230 37692438 ~ 37698139 (-)
cadm2b cadm2,LOC100695412,LOC103378151,LOC106520568,LOC102793287 other upstream 29752 40290005 ~ 40470176 (-)
cntn5 NA other upstream 1769420 42029673 ~ 42167037 (-)
LOC120574039 nlk,nlk2 other upstream 2976429 43236682 ~ 43346673 (-)
LOC120553425 NA other upstream 3440718 43700971 ~ 43716741 (-)
smco4 NA other upstream 3509813 43770066 ~ 43789435 (-)

Expression


Co-expression Network