LOC120544519



Basic Information


Item Value
gene id LOC120544519
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 1761090 ~ 1762426 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>XM_039778328.1
ATGGCTGaacTTCTTCTAACCCTTGCATCATTATCTCTGCATGTTTCCCCCTTGGGTCTACCAAAGGAGCCCTCGGCAGACGTCAAGCTGGCGACCTTAGCAGGAAAGAAGGACATAAAGGCCGAGGAGGAGGAACAGCCTTCAGCACctcatgcagcagcagcagcagtgaaggaggaagaggaggagtatGTGGTGGAGAAGGTTTTGGACCGCAGATTGGTGAAGGGAAGAGTAGAGTTCCTGCTGAAATGGAAGGGGTTCTCAGATGAGGATAACACATGGGAGCCGCAAGACATCCTGGACTGCCCCGACCTTATCACAgagtacatgcagaaacacgaggaggaggaggaggagaagaaggagggcaAGAGGAAAGGTGTCAGTGAGGCCTCTGGAGACTCAGAGGAGCgagggagcaagaggaagaaggaggaggtgagCCAAGGAAAGAGGTTACTCCGAACTGAAGTACCAGAAATCTAATCTCATTATCAA

Function


GO: NA

KEGG:

id description
ko03460 Fanconi anemia pathway

RNA


RNA id representative length rna type GC content exon number start site end site
XM_039778328.1 True 501 mRNA 0.52 3 1761090 1762426

Neighbor


gene id symbol gene type direction distance location
LOC120544663 NA coding downstream 82376 1674330 ~ 1678714 (-)
LOC120570757 NA coding downstream 95622 1639505 ~ 1665468 (-)
LOC120544633 NA coding downstream 146848 1596198 ~ 1614242 (-)
LOC120544624 NA coding downstream 175095 1502247 ~ 1585995 (-)
LOC120544669 NA coding upstream 32994 1795420 ~ 1944220 (-)
LOC120544522 NA coding upstream 54154 1816580 ~ 1818524 (-)
LOC120570781 NA coding upstream 88687 1851113 ~ 1876999 (-)
LOC120571537 NA coding upstream 117682 1880108 ~ 1884734 (-)
LOC120571592 NA coding upstream 150279 1912705 ~ 1914419 (-)
G13723 NA non-coding downstream 56078 1704488 ~ 1705012 (-)
LOC120571736 NA non-coding downstream 66406 1684982 ~ 1694684 (-)
G13719 NA non-coding downstream 72058 1688784 ~ 1689032 (-)
G13654 NA non-coding downstream 280441 1329699 ~ 1480649 (-)
G13734 NA non-coding upstream 41880 1804306 ~ 1862706 (-)
G13656 NA non-coding upstream 55636 1818062 ~ 1821409 (-)
G13738 NA non-coding upstream 59050 1821476 ~ 1826950 (-)
G13743 NA non-coding upstream 90806 1853232 ~ 1855176 (-)
LOC120571691 NA non-coding upstream 224553 1986979 ~ 1987408 (-)
G13651 NA other downstream 379369 1302896 ~ 1381721 (-)
LOC120571038 NA other downstream 563347 1166598 ~ 1197743 (-)
G13587 NA other downstream 563404 1127891 ~ 1197686 (-)
LOC120571545 NA other downstream 783352 969648 ~ 977738 (-)
si:ch211-137a8.2 NA other downstream 1010587 740452 ~ 750503 (-)
G13995 iws1 other upstream 1218635 2981061 ~ 2984498 (-)
LOC120570817 NA other upstream 1294303 3056729 ~ 3228824 (-)
G14426 il1rap,LOC106536183,LOC107379882,LOC108229411,LOC106536182 other upstream 1710511 3472937 ~ 3722632 (-)
LOC120544895 LOC102787186 other upstream 2137027 3899453 ~ 4015956 (-)
LOC120571085 mb21d2 other upstream 2266314 4028740 ~ 4055084 (-)

Expression



Co-expression Network