LOC120544544


Basic Information

Item Value
gene id LOC120544544
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 2486924 ~ 2495210 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039778406.1
ATGTATCGcctaaaaacaaagcctgaggagattttcttctgtctgcacCTTTCCAGTGAGGATAACACATGGGAGCCTCAAGACAACCTGGACTGCCCCGACCTTATCACAgaCATGCAGTCCCTTCGAAACGAGTCGGATGAAGTGAAAGCCCATGTCCAGTACCAACATGAATTCAAAGAAGCTTGTATCCTGGCCCTGGGAGAAACCTGGCTGGGAGAAGCTGACTCGGACGCTGGCATTGCATTAGATGGTTTCAGTGCTCCTGTTTGCATGGACCGGGTTGCAGCGAGCATTGGAAAGTCGCGAGGGGGCGGGGTGTGCCTGTACATAAATGAGCGCTGGTGTAAAACAACACTAAGGGGGAAAGTAGATACCAGGCAAGTGAAGGGCTGGTCTGAGGAGGCTACGCTGGCCCTGCAAGGCTGCTTGGACTGCACTTTATGGGAGGAGTTTGTCCAATCCTCACGGGACATAGATGAACTGACTGAAGTGGTCAGCTCATGGGTTGCATATTGTGAGGACACGccttacagctgtgatcagtgtggggcagctttcacacgacAGAGTACCCTTATaatacatcaacgcattcacactggagagaagccttacagctgtgatcaatgtggtaaAAAATTTTCTAGGAGTGATAGCCTAGAAATCCACCGACgtattcacactggagagaagccgtactggtgtgatcTATGTGGTACAGCGTTTTCTCAGAGTGGTCACCTAGAAAGCCACAGAAGTGTTCACACTAGAGATAAaccgtacagctgtgaacaatgcGGGGCAGCATTCATGTATTTAAATAGGTTACAATCCcaccgacgtgttcacactggagagaagccgttctggtgtgaacaatgtgggaaaatgtTTTCTCAGAGTAGGTACCTTAAAAgacaccagcgcattcacactggagagaagccgtactggtgtgaacaatgtggaaaAACTTTTTCTCAAAGTACTGACCTTAAAAaacaccagcgcattcacacgggagagaagccgtactggtgtgaacaatgtggtaaAACTTTTTCTCAGATTGGTaaccttaaatctcaccagcgcGTTCACACTGTCTCATTGTGAACATGTTTcagagccaagctgtttcctcctgcctcctcctggCTAGGACTACACATTACACTCGCTCCCTTTGAAGGGATTTATTCCAATCAAAATTAGATATTATTTTCCTGTAATAAAATATGAGTTAATTTTATGGAgcaataaaaacaatgtttaaaatGGAATTATTAAACACTCATTGAAAcaatcattaaacaaaatggttaaaataaaatttgccatcacaatacccaaattaaaagtggtacagcttccatatactttgacactctggggtTTGCCTGACATCACTGTAACATTTAAATCTAACTGGTCCGAGCAAATGTCGGTCGTTTCAACGTGTTGcctgacatgttgtcatcggcttgtccTCTTTCATTGGCCATAccagaggcaaacctgaacgcATTGGCTAATGTGAGCTACCAATGGAAAGCTTAGAAGCTAGCGAATACGATGACGCCCACTACAAGCATGTAGGAAGCTGGGGAAAAAAGCGAGCGGCGATTGAAGTGTGGAAATGGAAAACTGTTACGCTTTTTTtcgttgtgattcggccagaaacttcaacattgtgagacgaacagatcgttttggaatataaagcttggatattacagttccttggactcttggggatttatgaacatcaagttttgggcaaaataccactttgttgctgaaaggacaacgaaaacagGTATGCATGCACTCTCAACACCAGACACCAGCTGCGCAGATtacggctgaattgttttattttctgttactttgtaacagttgtgtaactgctataaatcatcttatgctttgtatgtggtcttaaattaatcattagaggctaagctttcaattggtgtgttgcatggctgtatattttgaagatttaatgctttaaagatATAAAAACGCTAATTAGTGGAaattttatcgaggttacagcgacgccaaagtcacaaagtgtccCGTTAACGGGACAGTGATCCTTGAGAGgttctgaaacgcaagtatcaaacgtgaaacgcaagtagctttgtgggcggatctcgggcactGTTACTATTATACCgacgggataaatgagtcttgcgtcCGACGCAAATCTGAAATGGGTTGggctgaagtagctaggtgtggtttgggcgtaacgtgcaataaaccaatcagagcatcatctcacattccctttaagagca

Function

GO:

id name namespace
GO:0035265 organ growth biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039778406.1 True 2318 mRNA 0.44 4 2486924 2495210

Neighbor

gene id symbol gene type direction distance location
LOC120570706 ltbp4 coding upstream 52590 2386670 ~ 2434334 (+)
LOC120544531 NA coding upstream 235631 2245619 ~ 2251293 (+)
LOC120571219 NA coding upstream 262954 2208981 ~ 2223970 (+)
LOC120571617 NA coding upstream 348043 2138009 ~ 2138881 (+)
LOC120571197 NA coding upstream 369931 2097601 ~ 2116993 (+)
LOC120570773 NA coding downstream 55851 2551061 ~ 2563179 (+)
LOC120570971 NA coding downstream 71425 2566635 ~ 2594437 (+)
LOC120571336 NA coding downstream 74743 2569953 ~ 2702680 (+)
LOC120544551 NA coding downstream 130163 2625373 ~ 2632329 (+)
LOC120571227 NA coding downstream 163657 2658867 ~ 2672888 (+)
G13518 NA non-coding upstream 22046 2461744 ~ 2464878 (+)
G13516 NA non-coding upstream 96435 2390149 ~ 2390489 (+)
LOC120571707 NA non-coding upstream 241463 2224837 ~ 2245461 (+)
G13497 NA non-coding upstream 365846 2120746 ~ 2121078 (+)
G13476 NA non-coding upstream 489418 1997021 ~ 1997506 (+)
G13531 NA non-coding downstream 66645 2561855 ~ 2671603 (+)
G13535 NA non-coding downstream 100172 2595382 ~ 2767324 (+)
LOC120571804 NA non-coding downstream 326950 2822160 ~ 2822855 (+)
G13920 NA non-coding downstream 348845 2844055 ~ 2846365 (+)
G13921 NA non-coding downstream 351593 2846803 ~ 2847056 (+)
LOC120571187 NA other upstream 192036 2263410 ~ 2294888 (+)
G13390 NA other upstream 927261 1551864 ~ 1559663 (+)
G13262 NA other upstream 1205331 896198 ~ 1281593 (+)
G13286 NA other upstream 1487945 997866 ~ 998979 (+)
G13234 NA other upstream 1720947 765539 ~ 765977 (+)
LOC120571130 NA other downstream 115662 2610872 ~ 2792845 (+)
G13555 NA other downstream 231109 2726319 ~ 2738188 (+)
zgc:162872 LOC103361195,LOC100694875,LOC101467947,LOC102198539,LOC102776046 other downstream 453424 2948634 ~ 2964772 (+)
LOC120544739 NA other downstream 482641 2977851 ~ 2996315 (+)
G14148 NA other downstream 1524034 4019244 ~ 4055085 (+)

Expression


Co-expression Network