LOC120544728


Basic Information

Item Value
gene id LOC120544728
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 2805911 ~ 2817561 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039778684.1
AACGTTCTACGCGGGTAAATTAGAGCGGCGCACCCAAACACTAGGCTGCAGCGTGCAGCGTGTGGTGGTGCTCGGTGAATGAGACAGCAACTCCTCTTGGAGAGCGCAGAGGAGCTCCGATTTCTCCTGTTGAATCCAGAGTGAGTCCAGCAGCCCCAGTGGACATCTGCTGGATTTCAGGacaagagaggaatggaggaggacaaccagaaccaggagcagcggagcaacaaggtccccagaagaccagcagcagacCGGGACTCTGATACCAGccatgttcagGAGCCCTCAGCAGACGTCAAGCTGGCGACCGGAGCAGGAAAGAAGGGAAAGaaggccgaggaggaggaggagcagcctacagcacctcctgcagcagtgaaggaggaagaggaggaggaggaggagcagcctgcagcacctcctgtagctgaggaggagtatgtggtggagaaggttttggaccgcagagtggtgaagggaagagtagagtttctgctgaaatggaagGGGTTCTCCGATGAGGATAACACATGGGAGCCACAAGACAACCTGTACTGCCCCGACCTTATCACCgagtacatgcagaaacacaaggagaaggaggagggcaagaggaaagttgtcagtgaggCCTCGGGAGACTCGGAGCGAGGGAGCAAGAGGAAGGAGGGGaaacgcagaggaggagagggaccaaAACGTCACAACTGtcaacactgtgacaaatccttcacaagatctggatatttaaagattcatcagagagttcacactggagagaagccttacagctgtgatctatgtggtaaaaccttttctgaaAGTGGTagccttaaatctcaccagcgcattcacacaggagagaagccgtactggtgtgaacaatgtggaaaAACTTTTTCTGAGAGTGGCCACCTTAAaacacatcaacgcattcacactggagagaagccgtacgtgtgtgaacaatgtgggaaaactttttctgAGAGTGGTAACCTTAAaacacatcaacgcattcacactggagagaagccgtacagctgtgatctatgtggtaaaaccttttctcagagCAGTAACCTTAAAACTCACcagcgtgttcacactggagagaagttgtactggtgtgaacaatgtgggaaaactttttctctgAGTAGTGACCTTAAAAAACACCAGAgcgttcacactggagagaagccgtacagctgtgatctatgtggtaaaacattttctcagaGTAATAGCCTTAAAAgacaccagcgcattcacactggagagaagccgcactggtgtgaacaatgtgggaaaacgttTTCTCAGAGTGGTCACCTTAAAAACCACCAGCTCATTCACACTGCCTCGTTGTGAACATGTTTCcgagccaagctgtttcctcctgcctcctcctcatgccctgatagctgtgttgttattttctgatcttctctccacattgaaggctgaccagcAGTAACTTTATCTTCTGAACAGCATGTATGTTATCCTGGCTAGGACTACACATTACACTCCCTCCCTTTTGAAAGGCTGTATTCCACTCAAAATTAGTTAGTTTTCCTGTAATAAAGTTCAGGGTTCAACTGCTAGCGCTTTTTAACTAATGCTGCAGCGAAGAAGTGTTTGTTGTTCTTAATTAATCACCTGGTAAATACAATTTACAGAAATTCCGACCTCTGTTTACTACGGTGATGTCAAGTTGCTTCACTTTATTGTCACTGTAGACGACAAAAGCTTTAATCAGaatatggctgctgctgcctaAAAAATGACTTGAACAGTTGATGTGTTTAAACTGCGTCTgtgccgccgccatcttgggacAGACAACGGATCTTAAAGACTCAGAAAAAGATAGTTGTACTGCTTTTGGATGttcatgtgaaagaaatgctaaactaagcaaaatggaataacatttcacggatgaaattttttttttacaatattattattattaaagggtTGAATTCAATATCACAAAAGGTAACATTAATCCTTCTTTTAAGCTAACCGTAAGTTAAGTGACTGTCCTGATACTGAAttgagctaatgctagcttgtcagGTCATGTATGTTTTATCTAAGTGATTATTAATATCTCAGTAAGATGCTGAAAACtatgtttgttatgtgtgtCACTGAACAGTTCCTCACGTCATTCCCCATAGACCCCATGTGAAAAAATCAGAACTTTTcatcagaaatatataaatgtttacagcctggtacaaaaaaaagaaaacggttTTGGTCTATGAAGCTAATTTCACACTTCATAACAACTGTTTATATCACTCACCTGTTTAAATTGTATCAAGGCTTAAATCAGCAGACTGTTACTagctttaaaatattttgaaaaagtttgGTAATAAAACCTGCATTTTTCAAGTAACCTGTATTATAAATACATGTCTGACAGCTGTAGTAAACCGCTTGAAAATCA

Function

GO: NA

KEGG:

id description
ko03460 Fanconi anemia pathway

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039778684.1 True 2476 mRNA 0.44 6 2805911 2817561

Neighbor

gene id symbol gene type direction distance location
LOC120544717 NA coding upstream 6584 2797986 ~ 2799327 (+)
LOC120571388 NA coding upstream 20703 2711676 ~ 2785208 (+)
LOC120544561 NA coding upstream 45980 2742353 ~ 2759931 (+)
LOC120571598 NA coding upstream 72343 2732337 ~ 2733568 (+)
LOC120571608 NA coding upstream 98591 2705862 ~ 2707320 (+)
LOC120570832 NA coding downstream 35657 2853218 ~ 2872402 (+)
LOC120570793 NA coding downstream 71464 2889025 ~ 2934705 (+)
LOC120571294 NA coding downstream 117216 2934777 ~ 2940723 (+)
gmnc NA coding downstream 217248 3034809 ~ 3044150 (+)
LOC120554600 NA coding downstream 455418 3272979 ~ 3273169 (+)
G13535 NA non-coding upstream 38587 2595382 ~ 2767324 (+)
G13531 NA non-coding upstream 134308 2561855 ~ 2671603 (+)
G13518 NA non-coding upstream 341033 2461744 ~ 2464878 (+)
G13516 NA non-coding upstream 415422 2390149 ~ 2390489 (+)
LOC120571707 NA non-coding upstream 560450 2224837 ~ 2245461 (+)
LOC120571804 NA non-coding downstream 4599 2822160 ~ 2822855 (+)
G13920 NA non-coding downstream 26494 2844055 ~ 2846365 (+)
G13921 NA non-coding downstream 29242 2846803 ~ 2847056 (+)
G13929 NA non-coding downstream 61832 2879393 ~ 2879852 (+)
G13930 NA non-coding downstream 65254 2882815 ~ 2883942 (+)
LOC120571130 NA other upstream 13066 2610872 ~ 2792845 (+)
G13555 NA other upstream 67723 2726319 ~ 2738188 (+)
LOC120571187 NA other upstream 511023 2263410 ~ 2294888 (+)
G13390 NA other upstream 1246248 1551864 ~ 1559663 (+)
G13262 NA other upstream 1524318 896198 ~ 1281593 (+)
zgc:162872 LOC103361195,LOC100694875,LOC101467947,LOC102198539,LOC102776046 other downstream 131073 2948634 ~ 2964772 (+)
LOC120544739 NA other downstream 160290 2977851 ~ 2996315 (+)
G14148 NA other downstream 1201683 4019244 ~ 4055085 (+)
LOC120571647 LOC103360213,LOC102310147 other downstream 1420010 4237571 ~ 4852575 (+)
LOC120570718 LOC103473932 other downstream 1546105 4363666 ~ 4449830 (+)

Expression


Co-expression Network