LOC120545109


Basic Information

Item Value
gene id LOC120545109
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 6012848 ~ 6013786 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039779094.1
ATGATAAACTCTTCATATGTTTCATATTTCACTTTTGGTGCATACTTTGATATTGGGATCTTTAAATACTTACTTTTTCTGATCATTATGTGTTTTTATGCTTTAATAGTTTGTGCTAATCTATTGCTGACTGTGGTTATCTGTATGAACAGAAGCTTACATGAACCTATGTACCTTTTTCTGTGCAGCCTGTTTTTAACTGAACTGTTTGGTAGTACAGGGTTGTTTCCATTCCTTCTGGTTCAGATCctctctgacattcacactgtTTTTGCTCCCTTTTGTTTCCTGCAGATTTATTGTTTGAATGTATATGCAACTATACAATTTCAGAATTTAGCCATTCTGTCTTATGACAGATATCTTGCCATCTGTTATCCTCTGCAATATAACACACGTATGACATCTAACAAGGTTACCATGTTTATTGCTCTAACATGGTTATACTCATTTGTTGGAGTTGCTGTCTTGATATCTTTAAGTGCTCctttacagctgtgtgggaACATCATTAACAAAGTCTACTGTAACAACTATATTGTTGTCAAACTGGCCTGCTCTGACACCAGAGTCAATAACATTTATGGACTCATTAACACTTGTGTTGTAATCTTTGGTCCTCTCATTTTAATCATTTACACGTACATCAAGAtccttaaagtgtgtttttctgGTTCTAAACAGACCAGACAGAAAGCTGTCAGTACCTGCACACCTCACCTCGCTTCTCTACTCAACTTTTCTTTTGGTTCTTtctttgaaatattacagagcaGGTTTGATATGAGAAGTGTACCCATGATGTTGcagatttttctgtctttatacTTTCTGACCTGCCAACCAATCTTCAACCCTTTAATATATGGCCTGCAATTGTCTAAAATACGTAGCTTATGTAAAAGTCTTATCTTTGGTAAAACGTCAACTGATGTTTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039779094.1 True 939 mRNA 0.35 1 6012848 6013786

Neighbor

gene id symbol gene type direction distance location
sst1.1 LOC101485677,LOC102296407,LOC102206005 coding upstream 269743 5738138 ~ 5743105 (+)
sst1.2 LOC104933374,LOC103361206 coding upstream 292559 5716270 ~ 5720289 (+)
col4a3 NA coding upstream 300989 5641654 ~ 5711859 (+)
LOC120549121 NA coding upstream 465515 5543291 ~ 5547333 (+)
LOC120572059 NA coding upstream 551338 5447146 ~ 5461510 (+)
LOC120545182 NA coding downstream 55639 6069425 ~ 6070366 (+)
LOC120545198 NA coding downstream 108271 6122057 ~ 6138120 (+)
LOC120545205 NA coding downstream 127681 6141467 ~ 6142387 (+)
LOC120545214 NA coding downstream 147660 6161446 ~ 6164376 (+)
LOC120545220 NA coding downstream 155433 6169219 ~ 6174510 (+)
G14792 NA non-coding upstream 9934 6002208 ~ 6002914 (+)
G14788 NA non-coding upstream 92162 5919899 ~ 5920686 (+)
G14782 NA non-coding upstream 186168 5826342 ~ 5826680 (+)
G14772 NA non-coding upstream 242293 5770216 ~ 5770555 (+)
G14767 NA non-coding upstream 265782 5746541 ~ 5747066 (+)
G14807 NA non-coding downstream 150659 6164445 ~ 6190509 (+)
G14841 NA non-coding downstream 247085 6260871 ~ 6261222 (+)
G14863 lipt2 non-coding downstream 367937 6381723 ~ 6388400 (+)
G14901 NA non-coding downstream 444338 6458124 ~ 6458818 (+)
G14902 NA non-coding downstream 445156 6458942 ~ 6463821 (+)
G14344 NA other upstream 484229 5510757 ~ 5528619 (+)
G14187 LOC107380983,LOC108250349,LOC108250351,LOC103477369,LOC103473932,LOC107835021,LOC106936810,LOC102294474,LOC102776571,LOC108229490,LOC103360213,LOC107834023,LOC103368570,LOC102214284,LOC102800009,LOC101480046,LOC101470105,LOC102792843 other upstream 595713 4801340 ~ 5417135 (+)
G14209 LOC102792843 other upstream 1485471 4500173 ~ 4527377 (+)
LOC120570718 LOC103473932 other upstream 1563018 4363666 ~ 4449830 (+)
rnf169 NA other downstream 379276 6393062 ~ 6404425 (+)
spcs2 spcs2 other downstream 394199 6407985 ~ 6417509 (+)
G15019 NA other downstream 959059 6972845 ~ 6989396 (+)
G15173 LOC102077075 other downstream 1384315 7398101 ~ 7399141 (+)
G15234 NA other downstream 1477579 7491365 ~ 7492057 (+)

Expression


Co-expression Network