Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC120545240 |
| gene name | NA |
| gene type | coding |
| species | eurasian perch (Perca fluviatilis) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_053113.1 |
| NCBI id | CM020910.1 |
| chromosome length | 48524041 |
| location | 6290058 ~ 6290978 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| id | name | namespace |
|---|---|---|
| GO:0007186 | G protein-coupled receptor signaling pathway | biological_process |
| GO:0050911 | detection of chemical stimulus involved in sensory perception of smell | biological_process |
| GO:0005886 | plasma membrane | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0004930 | G protein-coupled receptor activity | molecular_function |
| GO:0004984 | olfactory receptor activity | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_039779425.1 | True | 921 | mRNA | 0.52 | 1 | 6290058 | 6290978 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC120545220 | NA | coding | upstream | 115548 | 6169219 ~ 6174510 (+) |
| LOC120545214 | NA | coding | upstream | 125682 | 6161446 ~ 6164376 (+) |
| LOC120545205 | NA | coding | upstream | 147671 | 6141467 ~ 6142387 (+) |
| LOC120545198 | NA | coding | upstream | 151938 | 6122057 ~ 6138120 (+) |
| LOC120545182 | NA | coding | upstream | 219692 | 6069425 ~ 6070366 (+) |
| LOC120545249 | NA | coding | downstream | 32506 | 6323484 ~ 6324410 (+) |
| LOC120549609 | NA | coding | downstream | 59497 | 6350475 ~ 6353001 (+) |
| abcg1 | abcg1,LOC103475277,LOC103152983,LOC102205798 | coding | downstream | 129535 | 6420513 ~ 6448328 (+) |
| LOC120545383 | NA | coding | downstream | 219767 | 6510745 ~ 6520784 (+) |
| LOC120572075 | NA | coding | downstream | 221199 | 6512177 ~ 6516516 (+) |
| G14841 | NA | non-coding | upstream | 28836 | 6260871 ~ 6261222 (+) |
| G14807 | NA | non-coding | upstream | 99549 | 6164445 ~ 6190509 (+) |
| G14792 | NA | non-coding | upstream | 287144 | 6002208 ~ 6002914 (+) |
| G14788 | NA | non-coding | upstream | 369372 | 5919899 ~ 5920686 (+) |
| G14782 | NA | non-coding | upstream | 463378 | 5826342 ~ 5826680 (+) |
| G14863 | lipt2 | non-coding | downstream | 90745 | 6381723 ~ 6388400 (+) |
| G14901 | NA | non-coding | downstream | 167146 | 6458124 ~ 6458818 (+) |
| G14902 | NA | non-coding | downstream | 167964 | 6458942 ~ 6463821 (+) |
| G14904 | NA | non-coding | downstream | 174530 | 6465508 ~ 6466255 (+) |
| G14907 | NA | non-coding | downstream | 182532 | 6473510 ~ 6473769 (+) |
| G14344 | NA | other | upstream | 761439 | 5510757 ~ 5528619 (+) |
| G14187 | LOC107380983,LOC108250349,LOC108250351,LOC103477369,LOC103473932,LOC107835021,LOC106936810,LOC102294474,LOC102776571,LOC108229490,LOC103360213,LOC107834023,LOC103368570,LOC102214284,LOC102800009,LOC101480046,LOC101470105,LOC102792843 | other | upstream | 872923 | 4801340 ~ 5417135 (+) |
| G14209 | LOC102792843 | other | upstream | 1762681 | 4500173 ~ 4527377 (+) |
| LOC120570718 | LOC103473932 | other | upstream | 1840228 | 4363666 ~ 4449830 (+) |
| rnf169 | NA | other | downstream | 102084 | 6393062 ~ 6404425 (+) |
| spcs2 | spcs2 | other | downstream | 117007 | 6407985 ~ 6417509 (+) |
| G15019 | NA | other | downstream | 681867 | 6972845 ~ 6989396 (+) |
| G15173 | LOC102077075 | other | downstream | 1107123 | 7398101 ~ 7399141 (+) |
| G15234 | NA | other | downstream | 1200387 | 7491365 ~ 7492057 (+) |
