LOC120545393


Basic Information

Item Value
gene id LOC120545393
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 6550690 ~ 6551630 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039779672.1
AGAGGATCATGGTAAACGCTACACAGGTTTCATTTTTCACACTAAGTGCCTATTTTGACACAGGGGCtttcaaatatttatattttattattatcatgtCTTTATATGTTGTAATAATTTGTACCAATCTTTTGCTGATTGTGGTTATCTGTATGAACAGAAGCTTACATGAACCTATGTACCTTTTTCTGTGCAGCCTGTTTGTAAATGAACTGTATGGTAGTACAGGGTTGTTTCCATTCCTTCTGGTTCAGATCAtctctgacattcacactgtttctacttctttttgttttatacagATTTTCTGTTTGTTCTCTTATGGAGGTAGAGAATTTTGGACCTTAGCCATCATGTCTTATGACAGATATCTTGCTATCTGTTATCCTCTACAATATCACACTCATATGACATCTAAAAAGATTGCCATGCTTATTTCTCTAACATGGTTGTACCCTACTCTTACCAATGCTTTGGTAGTGTTTGGTCTGACTGCTCCTTTACAGCTGTGTGGAAACATTATTAACAAAGTGTACTGTGACAACTATTCTGTTGTCAAACTGGCCTGCTCTGACACCAGAGTCAATAACATTTTTGGACTTGTTgacatatttacagtaaatgttAGTCTTATTTTCTTAATTCTTTTCTCTTACATGAGAATTCTTAAAGTGTGTTTATCTGGTTCCAAACAGACCAGACAGAAAGCTCTCAGTACCTGCACACCTCACCTTTTTTCCCTGCTGAATTTTTCTTGTGGAGGTGCCTTTGAAATAATGCAGAGCAGGTTTAATATGAACTATTTACCCAATATTTTGCGCATTTTTCTGTCATTGTACTGGCTAACATGCCAACCACTCATCAACCCTTTACTGTACGGACTGAAAATGTCCAAAATACGCATTGTATGTAGACGTCTGCTCTTTGGGGGGAAAAGGTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039779672.1 True 941 mRNA 0.37 1 6550690 6551630

Neighbor

gene id symbol gene type direction distance location
LOC120552719 NA coding upstream 8310 6541363 ~ 6542380 (+)
LOC120572775 NA coding upstream 15289 6534469 ~ 6535401 (+)
LOC120552698 NA coding upstream 24527 6525208 ~ 6526163 (+)
LOC120545383 NA coding upstream 29906 6510745 ~ 6520784 (+)
LOC120572075 NA coding upstream 34174 6512177 ~ 6516516 (+)
LOC120572346 NA coding downstream 38106 6589736 ~ 6590668 (+)
LOC120545404 NA coding downstream 48129 6599759 ~ 6607610 (+)
LOC120545410 NA coding downstream 60682 6612312 ~ 6613238 (+)
LOC120545416 NA coding downstream 65167 6616797 ~ 6617723 (+)
LOC120570331 NA coding downstream 82969 6634599 ~ 6635525 (+)
G14930 NA non-coding upstream 38804 6511135 ~ 6511886 (+)
G14928 NA non-coding upstream 40716 6508571 ~ 6509974 (+)
G14917 NA non-coding upstream 56040 6494388 ~ 6494650 (+)
G14908 NA non-coding upstream 73544 6476674 ~ 6477146 (+)
G14907 NA non-coding upstream 76921 6473510 ~ 6473769 (+)
G14939 NA non-coding downstream 26592 6578222 ~ 6578453 (+)
LOC120572178 NA non-coding downstream 138401 6690031 ~ 6690891 (+)
G15012 NA non-coding downstream 392692 6944322 ~ 6991913 (+)
G15021 NA non-coding downstream 426169 6977799 ~ 6978105 (+)
G15032 NA non-coding downstream 465165 7016795 ~ 7017311 (+)
spcs2 spcs2 other upstream 133181 6407985 ~ 6417509 (+)
rnf169 NA other upstream 146265 6393062 ~ 6404425 (+)
G14344 NA other upstream 1022071 5510757 ~ 5528619 (+)
G14187 LOC107380983,LOC108250349,LOC108250351,LOC103477369,LOC103473932,LOC107835021,LOC106936810,LOC102294474,LOC102776571,LOC108229490,LOC103360213,LOC107834023,LOC103368570,LOC102214284,LOC102800009,LOC101480046,LOC101470105,LOC102792843 other upstream 1133555 4801340 ~ 5417135 (+)
G14209 LOC102792843 other upstream 2023313 4500173 ~ 4527377 (+)
G15019 NA other downstream 421215 6972845 ~ 6989396 (+)
G15173 LOC102077075 other downstream 846471 7398101 ~ 7399141 (+)
G15234 NA other downstream 939735 7491365 ~ 7492057 (+)
rffl rffl other downstream 1255179 7806809 ~ 7853429 (+)
LOC120543808 NA other downstream 1274980 7826610 ~ 7828087 (+)

Expression


Co-expression Network