LOC120545404


Basic Information

Item Value
gene id LOC120545404
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 6599759 ~ 6607610 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039779698.1
ATGATAAACTTCACACAGGTTTCATATTTCACTTTTGGTGCATACTTTAATATTGGGCTCTTTAAATACTTATTTTTTCTGATCATTATGTGTTTTTATGCTTTAATAGTTTGTGCCAATCTTTTGCTGATTGTGGTTATCTGTAAGAACAGAAGCTTACATGAACCTATGTACCTTTTTCTGTGCAGCCTGTTTGTAAATGAACTGTATGGTAGTACAGGGTTGTTTCCATTCCTTCTGGTTCAGATCctctctgacattcacactgtttctgttcccttctgtttcctgcagattttCTGTGTGTATACTTATGGCTGTGTAGAGTTTAGTAACTTAGCCATCATGTCTTATGACAGATATCTTGCTATCTGTTATCCTCTGCAATATAACACACGTATGACATATAACAAGGTTGCCGTGCTTATTGCTCTAACATGGTTATTTCCATTTTTTGCAATTGCTGTCCCGATGTCTTTAAGTTCCTctttacagctgtgtgggaACATCATTAACACAGTTTACTGTGACAATTACTCTATTGTCAAACTGGCCTGCTCTGACACCGCAGTGAACAACATTTATGGACTCATTAACACTTGTCTTGTAGTCTTCGTTGCTCTTATAATTCTCATTCTTTACTCCTACATGAGGATtcttaaagtgtgtttttctgGTTCTAAACAGACCAGACAGAAAGCTGTCAGTACCTGCACACCTCACCTTCTTTCCCTGCTCAACTTTTCTTTTGGGTCTTTCTTTGAAGTAGTGCAAGGGAGATTTAATATGAACAGTTTACCCATCATGTTACGCATTTTTCTGTCATTGTACTGGCTTACGTGCCAGCCGCTCTTCAATCCTGTAATGTACGGACTGAAAATATCCAAAATCCGTAACATATGTAGAAGTCTTGGTTTTGGGATCACGCAACATTGCAGAGATGGCGGTGGAGTTCTGGACTATGGCAGCGCCATCAGGTTGGATAACCGCATTCGGGAGCGCCGCTGTGAGAAGACGGCCAGCCCCAGGTTACCTGTCTGTCACCTATCAACTCCTCCCCGCCGTTTCGCTCTGGAAGCGGCTGAGACTCCCCGACTCCCTACGAGTAGTTCCGAACCCGAAGCcatggaggtgggctgtgtacAATTGTCCTCTGAGGAGCGTGCACGCCGCATTAATGCTCGATCTTGCCTTTACTGTGACCTCCCTCCAGTGGCAGTCCCGGAGTTTCCCTGTCGGCGCGCTTATTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039779698.1 True 1251 mRNA 0.43 5 6599759 6607610

Neighbor

gene id symbol gene type direction distance location
LOC120572346 NA coding upstream 9091 6589736 ~ 6590668 (+)
LOC120545393 NA coding upstream 48129 6550690 ~ 6551630 (+)
LOC120552719 NA coding upstream 57379 6541363 ~ 6542380 (+)
LOC120572775 NA coding upstream 64358 6534469 ~ 6535401 (+)
LOC120552698 NA coding upstream 73596 6525208 ~ 6526163 (+)
LOC120545410 NA coding downstream 4702 6612312 ~ 6613238 (+)
LOC120545416 NA coding downstream 9187 6616797 ~ 6617723 (+)
LOC120570331 NA coding downstream 26989 6634599 ~ 6635525 (+)
LOC120573309 NA coding downstream 30273 6637883 ~ 6638815 (+)
LOC120545443 NA coding downstream 57540 6665150 ~ 6670062 (+)
G14939 NA non-coding upstream 21306 6578222 ~ 6578453 (+)
G14930 NA non-coding upstream 87873 6511135 ~ 6511886 (+)
G14928 NA non-coding upstream 89785 6508571 ~ 6509974 (+)
G14917 NA non-coding upstream 105109 6494388 ~ 6494650 (+)
G14908 NA non-coding upstream 122613 6476674 ~ 6477146 (+)
LOC120572178 NA non-coding downstream 82421 6690031 ~ 6690891 (+)
G15012 NA non-coding downstream 336712 6944322 ~ 6991913 (+)
G15021 NA non-coding downstream 370189 6977799 ~ 6978105 (+)
G15032 NA non-coding downstream 409185 7016795 ~ 7017311 (+)
G15050 NA non-coding downstream 444576 7052186 ~ 7053965 (+)
spcs2 spcs2 other upstream 182250 6407985 ~ 6417509 (+)
rnf169 NA other upstream 195334 6393062 ~ 6404425 (+)
G14344 NA other upstream 1071140 5510757 ~ 5528619 (+)
G14187 LOC107380983,LOC108250349,LOC108250351,LOC103477369,LOC103473932,LOC107835021,LOC106936810,LOC102294474,LOC102776571,LOC108229490,LOC103360213,LOC107834023,LOC103368570,LOC102214284,LOC102800009,LOC101480046,LOC101470105,LOC102792843 other upstream 1182624 4801340 ~ 5417135 (+)
G14209 LOC102792843 other upstream 2072382 4500173 ~ 4527377 (+)
G15019 NA other downstream 365235 6972845 ~ 6989396 (+)
G15173 LOC102077075 other downstream 790491 7398101 ~ 7399141 (+)
G15234 NA other downstream 883755 7491365 ~ 7492057 (+)
rffl rffl other downstream 1199199 7806809 ~ 7853429 (+)
LOC120543808 NA other downstream 1219000 7826610 ~ 7828087 (+)

Expression


Co-expression Network