LOC120545448


Basic Information

Item Value
gene id LOC120545448
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 6699502 ~ 6709328 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039779777.1
ATGATAAACTCTACACAGGTTTCATATTTCATACTTGCTGCCTATTTTGACACCAGGGGTTTTAAATACTTACTTTTCTTGCTTATTTTGTCTTTATATGTTTTCATAATTTGTACCAATCTGTTGCTGATTGTGGTTATCTGTATGAACAGAAGCTTACATGAACCTATGTACCTTTTTCTGTGCAGCCTGTTTGTAAATGAACTGTATGGTAGTACAGGGTTGTTTCCATTCCTTCTGGTTCAGATCctctctgacattcacactgtTTCTGCTCCCTTATGTTTcctgcagattttctgtttgtACTCTTATGGAGCTAGTGAATTTTGGACCTTAGCCGTCATGTCTTATGACAGATATCTTGCTATCTGTTATCCTCTACAATATCACACTCGTATGACATCTAAAAAGATTGCCATGCTTATTGCTCTAACATGGTTGTACTCTTTTCTTAGATATGTTTTGATAGTGTTTGGTCTGACAGCTCCTTTACAGCTGTGTGGAAACATTATTAACAAAGTGTACTGTGACAACTATTCTGTTGTCAAACTGGCCTGTTCTGACACAACAGCCAATAACATTTTTGGACTCATTCACATGTTTACAGTAATCTTTGGTCTTATAATTTTAATTCTTTTCTCTTACATGAGAATTCTTAAAGTTTGTTTATCTGGTTCCAAACAGACCAGACAGAAAGCTCTCAGTACCTGCACACCTCACCTTTTTTCCCTGCTGAATTTTTCTTGTGGGGGTTTCTTTGAATTAGTACAGAGCAGGTTTAATATGAACTATTTACCGAATATGTTGCGCATTTTTCTGTCATTGTACTGTCTTACATGCCAACCACTCATCAACCCTTTACTGTATGGCCTGAAAATGTCCAAAATACGCATTccaataaCGGAGCCAGCCTTCCTGATGAGTTTGTACAGTCTGTTTGTGTGGCTGGCTCCGATGCTGCTGCCCCAGCAGATGGCGGAGGAGAACAGAGCGCTGGCCACAACACACTGGTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039779777.1 True 1017 mRNA 0.39 2 6699502 6709328

Neighbor

gene id symbol gene type direction distance location
LOC120545443 NA coding upstream 29440 6665150 ~ 6670062 (+)
LOC120573309 NA coding upstream 60687 6637883 ~ 6638815 (+)
LOC120570331 NA coding upstream 63977 6634599 ~ 6635525 (+)
LOC120545416 NA coding upstream 81779 6616797 ~ 6617723 (+)
LOC120545410 NA coding upstream 86264 6612312 ~ 6613238 (+)
LOC120545475 NA coding downstream 14466 6723794 ~ 6724723 (+)
LOC120545480 NA coding downstream 19835 6729163 ~ 6734845 (+)
LOC120545496 NA coding downstream 57124 6766452 ~ 6767381 (+)
LOC120545500 NA coding downstream 64688 6774016 ~ 6774945 (+)
LOC120545533 LOC101478539 coding downstream 184222 6893550 ~ 6894497 (+)
LOC120572178 NA non-coding upstream 8611 6690031 ~ 6690891 (+)
G14939 NA non-coding upstream 121049 6578222 ~ 6578453 (+)
G14930 NA non-coding upstream 187616 6511135 ~ 6511886 (+)
G14928 NA non-coding upstream 189528 6508571 ~ 6509974 (+)
G14917 NA non-coding upstream 204852 6494388 ~ 6494650 (+)
G15012 NA non-coding downstream 234994 6944322 ~ 6991913 (+)
G15021 NA non-coding downstream 268471 6977799 ~ 6978105 (+)
G15032 NA non-coding downstream 307467 7016795 ~ 7017311 (+)
G15050 NA non-coding downstream 342858 7052186 ~ 7053965 (+)
G15028 NA non-coding downstream 383800 7093128 ~ 7093466 (+)
spcs2 spcs2 other upstream 281993 6407985 ~ 6417509 (+)
rnf169 NA other upstream 295077 6393062 ~ 6404425 (+)
G14344 NA other upstream 1170883 5510757 ~ 5528619 (+)
G14187 LOC107380983,LOC108250349,LOC108250351,LOC103477369,LOC103473932,LOC107835021,LOC106936810,LOC102294474,LOC102776571,LOC108229490,LOC103360213,LOC107834023,LOC103368570,LOC102214284,LOC102800009,LOC101480046,LOC101470105,LOC102792843 other upstream 1282367 4801340 ~ 5417135 (+)
G14209 LOC102792843 other upstream 2172125 4500173 ~ 4527377 (+)
G15019 NA other downstream 263517 6972845 ~ 6989396 (+)
G15173 LOC102077075 other downstream 688773 7398101 ~ 7399141 (+)
G15234 NA other downstream 782037 7491365 ~ 7492057 (+)
rffl rffl other downstream 1097481 7806809 ~ 7853429 (+)
LOC120543808 NA other downstream 1117282 7826610 ~ 7828087 (+)

Expression


Co-expression Network