LOC120545480


Basic Information

Item Value
gene id LOC120545480
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 6729163 ~ 6734845 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039779839.1
ATGATAAACTCTACACAGGTTTCATATTTCAAACTTGCTGCCTACTTTGACACCGGGGTTTTCAAATATTTACTTTTCCTGATTATTATGTGTTTTTATGCTGTAATTATTTGTGCCAATGTTTTGCTGATTGTGGTTATCTGTATGAACAGAAGCTTACATGAACCTATGTACCTTTTTCTGTGCAGCCTGTTTGTAAATGAACTGTATGGTAGTACAGGGTTGTTTCCATTCCTTCTGGTTCAGATCctctctgacattcacactgtttctgctccattctgtttcctgcagattttctgtttgtACTCTTATGGAGGTGTAGAACTTTGGACCTTAGCCGTCATGTCTTATGACAGATATCTTGCTATCTGTTATCCTCTACAATATCACACTCGTATGACATCTAAAAAGATTGCCATGCTTATTGCTCTAACATGGTTGTACTCTTTTCttgtccatattttgatagtgtctGGTCTGACTGCTCCTTTACAGCTGTGTGGAAACATTATTAACAAAGTTTACTGTGACAACTATTATGTTGTCAAACTGGCCTGCTCTGACACAACAGCCAATAACATTTTTGGACTTGTTCACATGTTTACAGTAATCTTTGGTCTAATAATCTTAATTCTTTTCTCTTACATGAGCATTCTTAAAGTGTGTTTATCTGGTTCCAAACAGACCAGACAGAAAGCTCTCAGTACCTGCACACCTCACCTTTTTTCCCTGCTGAATTTTTCTTGTGGAGCTTTCTTTGAAATAGTACAGAGCAGGTTTAATATGAACTATTTACCCAATATTTTGCGCATTTTTCTGTCATTGTACTGGCTAACATGCCAACCACTCATCAACCCTTTACTGTATGGACTGCAAATGTCCAAAATACGCATTGTATGTAGACGTCTGCTCTTTGGGGGGAAAAGCTACTCGGCCTGGggctccagctgcgtggtgtcggtttggGCTCCAGGGAAGCAGGCAGTacgctccagatcctgcagccacagaacggactctgctgccctTTGGCAACTGTGTTCCCGGGGGGAAGAGCGGGCCGCCCAAGCGTTTTGTTCGCTGCTACGCCGGGTCCCTGCTGATCCAGATGGGACCGTCAAAGACACAGTGGTGATCGGGAGGATcttccacgtagtccaggacgacctGCGGACGGAGAGGAGCTATTGCTGCTCTCCGCCGGTGGCAGGCGGACGAAGGGGAGCTattgctgctactgctgccCCGCACCGCAATAGCTCCTCTCCGTCCGTGGAAGATCCTCCCGATCACCACTGTGTCTTTgatctggagctcactgcctgcTTCCTGGCAGCCAAAACCGACAACAAGAAGCTAGAGCCCCAGGCCGTACTGCTGGGCCGGCTGGAAGGAAGGGAAGCCCGGCAGAACCAGTACCAGGATTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039779839.1 True 1431 mRNA 0.46 4 6729163 6734845

Neighbor

gene id symbol gene type direction distance location
LOC120545475 NA coding upstream 4440 6723794 ~ 6724723 (+)
LOC120545448 NA coding upstream 19835 6699502 ~ 6709328 (+)
LOC120545443 NA coding upstream 59101 6665150 ~ 6670062 (+)
LOC120573309 NA coding upstream 90348 6637883 ~ 6638815 (+)
LOC120570331 NA coding upstream 93638 6634599 ~ 6635525 (+)
LOC120545496 NA coding downstream 31607 6766452 ~ 6767381 (+)
LOC120545500 NA coding downstream 39171 6774016 ~ 6774945 (+)
LOC120545533 LOC101478539 coding downstream 158705 6893550 ~ 6894497 (+)
LOC120545541 NA coding downstream 163793 6898638 ~ 6899582 (+)
LOC120545568 LOC102303044,LOC101479096 coding downstream 175698 6910543 ~ 6911490 (+)
LOC120572178 NA non-coding upstream 38272 6690031 ~ 6690891 (+)
G14939 NA non-coding upstream 150710 6578222 ~ 6578453 (+)
G14930 NA non-coding upstream 217277 6511135 ~ 6511886 (+)
G14928 NA non-coding upstream 219189 6508571 ~ 6509974 (+)
G14917 NA non-coding upstream 234513 6494388 ~ 6494650 (+)
G15012 NA non-coding downstream 209477 6944322 ~ 6991913 (+)
G15021 NA non-coding downstream 242954 6977799 ~ 6978105 (+)
G15032 NA non-coding downstream 281950 7016795 ~ 7017311 (+)
G15050 NA non-coding downstream 317341 7052186 ~ 7053965 (+)
G15028 NA non-coding downstream 358283 7093128 ~ 7093466 (+)
spcs2 spcs2 other upstream 311654 6407985 ~ 6417509 (+)
rnf169 NA other upstream 324738 6393062 ~ 6404425 (+)
G14344 NA other upstream 1200544 5510757 ~ 5528619 (+)
G14187 LOC107380983,LOC108250349,LOC108250351,LOC103477369,LOC103473932,LOC107835021,LOC106936810,LOC102294474,LOC102776571,LOC108229490,LOC103360213,LOC107834023,LOC103368570,LOC102214284,LOC102800009,LOC101480046,LOC101470105,LOC102792843 other upstream 1312028 4801340 ~ 5417135 (+)
G14209 LOC102792843 other upstream 2201786 4500173 ~ 4527377 (+)
G15019 NA other downstream 238000 6972845 ~ 6989396 (+)
G15173 LOC102077075 other downstream 663256 7398101 ~ 7399141 (+)
G15234 NA other downstream 756520 7491365 ~ 7492057 (+)
rffl rffl other downstream 1071964 7806809 ~ 7853429 (+)
LOC120543808 NA other downstream 1091765 7826610 ~ 7828087 (+)

Expression


Co-expression Network