LOC120545496


Basic Information

Item Value
gene id LOC120545496
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 6766452 ~ 6767381 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039779865.1
ATGATAAACTCTACTCAGGTTTTATATTTTGCACTCGTTGCCTATTTTGACACTGGGGCtttcaaatatttatatttcatgattgttatgtttttatatatgttaatagTTTGTACCAATCTTTTGCTGATTGTGGTTATCTGTATGAACAGAAGCTTACATGAACCTATGTACCTTTTTCTGTGCAGCCTGTTTGTAAATGAACTGTATGGTAGTACAGGGTTGTTTCCATTCCTTCTGGTTCAGATCctctctgacattcacactgtttctgcttctctttgttACTTGCAGATTTATTGTGTGCATTTCTATGGAAGTGTAGAATTGTTTACCTTAGGAGTCATGTCTTATGACAGATATCTTGCTATCTGTTATCCTCTGCATTATAACACTCGTATGACATCTAACAAGGTTGCCATGCTTATTGCGGCCGTATGGTTATACAGTGTACTTCCAACGGTTGTCATAATGTCTCTGAGTGTCCctttacagctgtgtgggaAGAAGATTCAAAAAGTGTACTGTGACAACTACTCCATTGTTAAACTGGCATGCTTCGACACAACTGTCAATAACATATATGGACTTGTGTACATGTTTACAGTAATATTTGTTCTTATAATTCTCATTCTTTACTCCTACATGAGGATTCTTAAAGTTTGTTATTCTGGTTCTAAACAGACCAGACAGAAAGCTATCAGTACCTGCATACCTCACCTTCTTTCCCTGCTCAACTTTTCTTTTGGGTGTTTCTTTGAAGTAGTGCAAGGGAGATTTAATATGAACAGTTTACCCATCATGTTACGCATTTTTCTTTCATTGTACTGGCTTACGTGCCAGCCGCTCTTCAATCCTGTAATGTACGGActaaaaatgtccaaaattCGTAACATATGTAGAAGTCTTGCTTTTGGTAAAATAATGTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039779865.1 True 930 mRNA 0.37 1 6766452 6767381

Neighbor

gene id symbol gene type direction distance location
LOC120545480 NA coding upstream 31607 6729163 ~ 6734845 (+)
LOC120545475 NA coding upstream 41729 6723794 ~ 6724723 (+)
LOC120545448 NA coding upstream 57124 6699502 ~ 6709328 (+)
LOC120545443 NA coding upstream 96390 6665150 ~ 6670062 (+)
LOC120573309 NA coding upstream 127637 6637883 ~ 6638815 (+)
LOC120545500 NA coding downstream 6635 6774016 ~ 6774945 (+)
LOC120545533 LOC101478539 coding downstream 126169 6893550 ~ 6894497 (+)
LOC120545541 NA coding downstream 131257 6898638 ~ 6899582 (+)
LOC120545568 LOC102303044,LOC101479096 coding downstream 143162 6910543 ~ 6911490 (+)
LOC120543617 NA coding downstream 146303 6913684 ~ 6929585 (+)
LOC120572178 NA non-coding upstream 75561 6690031 ~ 6690891 (+)
G14939 NA non-coding upstream 187999 6578222 ~ 6578453 (+)
G14930 NA non-coding upstream 254566 6511135 ~ 6511886 (+)
G14928 NA non-coding upstream 256478 6508571 ~ 6509974 (+)
G14917 NA non-coding upstream 271802 6494388 ~ 6494650 (+)
G15012 NA non-coding downstream 176941 6944322 ~ 6991913 (+)
G15021 NA non-coding downstream 210418 6977799 ~ 6978105 (+)
G15032 NA non-coding downstream 249414 7016795 ~ 7017311 (+)
G15050 NA non-coding downstream 284805 7052186 ~ 7053965 (+)
G15028 NA non-coding downstream 325747 7093128 ~ 7093466 (+)
spcs2 spcs2 other upstream 348943 6407985 ~ 6417509 (+)
rnf169 NA other upstream 362027 6393062 ~ 6404425 (+)
G14344 NA other upstream 1237833 5510757 ~ 5528619 (+)
G14187 LOC107380983,LOC108250349,LOC108250351,LOC103477369,LOC103473932,LOC107835021,LOC106936810,LOC102294474,LOC102776571,LOC108229490,LOC103360213,LOC107834023,LOC103368570,LOC102214284,LOC102800009,LOC101480046,LOC101470105,LOC102792843 other upstream 1349317 4801340 ~ 5417135 (+)
G14209 LOC102792843 other upstream 2239075 4500173 ~ 4527377 (+)
G15019 NA other downstream 205464 6972845 ~ 6989396 (+)
G15173 LOC102077075 other downstream 630720 7398101 ~ 7399141 (+)
G15234 NA other downstream 723984 7491365 ~ 7492057 (+)
rffl rffl other downstream 1039428 7806809 ~ 7853429 (+)
LOC120543808 NA other downstream 1059229 7826610 ~ 7828087 (+)

Expression


Co-expression Network