Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC120545500 |
| gene name | NA |
| gene type | coding |
| species | eurasian perch (Perca fluviatilis) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_053113.1 |
| NCBI id | CM020910.1 |
| chromosome length | 48524041 |
| location | 6774016 ~ 6774945 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| id | name | namespace |
|---|---|---|
| GO:0007186 | G protein-coupled receptor signaling pathway | biological_process |
| GO:0050911 | detection of chemical stimulus involved in sensory perception of smell | biological_process |
| GO:0005886 | plasma membrane | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0004930 | G protein-coupled receptor activity | molecular_function |
| GO:0004984 | olfactory receptor activity | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_039779880.1 | True | 930 | mRNA | 0.38 | 1 | 6774016 | 6774945 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC120545496 | NA | coding | upstream | 6635 | 6766452 ~ 6767381 (+) |
| LOC120545480 | NA | coding | upstream | 39171 | 6729163 ~ 6734845 (+) |
| LOC120545475 | NA | coding | upstream | 49293 | 6723794 ~ 6724723 (+) |
| LOC120545448 | NA | coding | upstream | 64688 | 6699502 ~ 6709328 (+) |
| LOC120545443 | NA | coding | upstream | 103954 | 6665150 ~ 6670062 (+) |
| LOC120545533 | LOC101478539 | coding | downstream | 118605 | 6893550 ~ 6894497 (+) |
| LOC120545541 | NA | coding | downstream | 123693 | 6898638 ~ 6899582 (+) |
| LOC120545568 | LOC102303044,LOC101479096 | coding | downstream | 135598 | 6910543 ~ 6911490 (+) |
| LOC120543617 | NA | coding | downstream | 138739 | 6913684 ~ 6929585 (+) |
| or55e1 | LOC104939064 | coding | downstream | 160101 | 6935046 ~ 6941434 (+) |
| LOC120572178 | NA | non-coding | upstream | 83125 | 6690031 ~ 6690891 (+) |
| G14939 | NA | non-coding | upstream | 195563 | 6578222 ~ 6578453 (+) |
| G14930 | NA | non-coding | upstream | 262130 | 6511135 ~ 6511886 (+) |
| G14928 | NA | non-coding | upstream | 264042 | 6508571 ~ 6509974 (+) |
| G14917 | NA | non-coding | upstream | 279366 | 6494388 ~ 6494650 (+) |
| G15012 | NA | non-coding | downstream | 169377 | 6944322 ~ 6991913 (+) |
| G15021 | NA | non-coding | downstream | 202854 | 6977799 ~ 6978105 (+) |
| G15032 | NA | non-coding | downstream | 241850 | 7016795 ~ 7017311 (+) |
| G15050 | NA | non-coding | downstream | 277241 | 7052186 ~ 7053965 (+) |
| G15028 | NA | non-coding | downstream | 318183 | 7093128 ~ 7093466 (+) |
| spcs2 | spcs2 | other | upstream | 356507 | 6407985 ~ 6417509 (+) |
| rnf169 | NA | other | upstream | 369591 | 6393062 ~ 6404425 (+) |
| G14344 | NA | other | upstream | 1245397 | 5510757 ~ 5528619 (+) |
| G14187 | LOC107380983,LOC108250349,LOC108250351,LOC103477369,LOC103473932,LOC107835021,LOC106936810,LOC102294474,LOC102776571,LOC108229490,LOC103360213,LOC107834023,LOC103368570,LOC102214284,LOC102800009,LOC101480046,LOC101470105,LOC102792843 | other | upstream | 1356881 | 4801340 ~ 5417135 (+) |
| G14209 | LOC102792843 | other | upstream | 2246639 | 4500173 ~ 4527377 (+) |
| G15019 | NA | other | downstream | 197900 | 6972845 ~ 6989396 (+) |
| G15173 | LOC102077075 | other | downstream | 623156 | 7398101 ~ 7399141 (+) |
| G15234 | NA | other | downstream | 716420 | 7491365 ~ 7492057 (+) |
| rffl | rffl | other | downstream | 1031864 | 7806809 ~ 7853429 (+) |
| LOC120543808 | NA | other | downstream | 1051665 | 7826610 ~ 7828087 (+) |
