Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC120545541 |
| gene name | NA |
| gene type | coding |
| species | eurasian perch (Perca fluviatilis) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_053113.1 |
| NCBI id | CM020910.1 |
| chromosome length | 48524041 |
| location | 6898638 ~ 6899582 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| id | name | namespace |
|---|---|---|
| GO:0007186 | G protein-coupled receptor signaling pathway | biological_process |
| GO:0050911 | detection of chemical stimulus involved in sensory perception of smell | biological_process |
| GO:0005886 | plasma membrane | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0004930 | G protein-coupled receptor activity | molecular_function |
| GO:0004984 | olfactory receptor activity | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_039779950.1 | True | 945 | mRNA | 0.51 | 1 | 6898638 | 6899582 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC120545533 | LOC101478539 | coding | upstream | 4141 | 6893550 ~ 6894497 (+) |
| LOC120545500 | NA | coding | upstream | 123693 | 6774016 ~ 6774945 (+) |
| LOC120545496 | NA | coding | upstream | 131257 | 6766452 ~ 6767381 (+) |
| LOC120545480 | NA | coding | upstream | 163793 | 6729163 ~ 6734845 (+) |
| LOC120545475 | NA | coding | upstream | 173915 | 6723794 ~ 6724723 (+) |
| LOC120545568 | LOC102303044,LOC101479096 | coding | downstream | 10961 | 6910543 ~ 6911490 (+) |
| LOC120543617 | NA | coding | downstream | 14102 | 6913684 ~ 6929585 (+) |
| or55e1 | LOC104939064 | coding | downstream | 35464 | 6935046 ~ 6941434 (+) |
| LOC120545619 | abcf3 | coding | downstream | 466214 | 7365796 ~ 7396634 (+) |
| trnal-cag | NA | coding | downstream | 512248 | 7411830 ~ 7411912 (+) |
| LOC120572178 | NA | non-coding | upstream | 207747 | 6690031 ~ 6690891 (+) |
| G14939 | NA | non-coding | upstream | 320185 | 6578222 ~ 6578453 (+) |
| G14930 | NA | non-coding | upstream | 386752 | 6511135 ~ 6511886 (+) |
| G14928 | NA | non-coding | upstream | 388664 | 6508571 ~ 6509974 (+) |
| G14917 | NA | non-coding | upstream | 403988 | 6494388 ~ 6494650 (+) |
| G15012 | NA | non-coding | downstream | 44740 | 6944322 ~ 6991913 (+) |
| G15021 | NA | non-coding | downstream | 78217 | 6977799 ~ 6978105 (+) |
| G15032 | NA | non-coding | downstream | 117213 | 7016795 ~ 7017311 (+) |
| G15050 | NA | non-coding | downstream | 152604 | 7052186 ~ 7053965 (+) |
| G15028 | NA | non-coding | downstream | 193546 | 7093128 ~ 7093466 (+) |
| spcs2 | spcs2 | other | upstream | 481129 | 6407985 ~ 6417509 (+) |
| rnf169 | NA | other | upstream | 494213 | 6393062 ~ 6404425 (+) |
| G14344 | NA | other | upstream | 1370019 | 5510757 ~ 5528619 (+) |
| G14187 | LOC107380983,LOC108250349,LOC108250351,LOC103477369,LOC103473932,LOC107835021,LOC106936810,LOC102294474,LOC102776571,LOC108229490,LOC103360213,LOC107834023,LOC103368570,LOC102214284,LOC102800009,LOC101480046,LOC101470105,LOC102792843 | other | upstream | 1481503 | 4801340 ~ 5417135 (+) |
| G14209 | LOC102792843 | other | upstream | 2371261 | 4500173 ~ 4527377 (+) |
| G15019 | NA | other | downstream | 73263 | 6972845 ~ 6989396 (+) |
| G15173 | LOC102077075 | other | downstream | 498519 | 7398101 ~ 7399141 (+) |
| G15234 | NA | other | downstream | 591783 | 7491365 ~ 7492057 (+) |
| rffl | rffl | other | downstream | 907227 | 7806809 ~ 7853429 (+) |
| LOC120543808 | NA | other | downstream | 927028 | 7826610 ~ 7828087 (+) |
