LOC120546095


Basic Information

Item Value
gene id LOC120546095
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 23159296 ~ 23162078 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039780872.1
AGTTATACCGAAAACCATCTACAAGCTCTGACAGACTGAATAACGTTTGCTTTTGTTTCATGCACATGTTTTACTTGATTTGTTCTTTCTTCTAAAGTGTCTAAAGTCTCTTTGGAGACAGAAAATACTGACTTATAGGTCTGAGTTCTTTTAGAGGGCTGAAATGGACAAAATGTGAAAACGCTCTTTGTCTTACTTCATAACTTTAGTCTATATAGGGATATTGTGCAAGAgagtgtgtgcgcgcgcatgtgtgtgagtgtgtaaggTGAAAGGAGTATAGAGGGTATTTAAACACACTTAAAAGCAGAACAGCTCTATTACTTCCAGCAAGCAGTGTGGGTGCAACAGTCCTTTGAAACCCTTTAAGCAGCCATGGGTGACATCTCGGACAATGAATCTATCTCTAATATAGCCAATACAACTGACTATTACGATTATGACATCCTGTTTCCTGAAATTTTGACCCCTGAAATTCAACCGATCCAGATCGCGGCTCTGGTCTTCTACGGCCTTGTGGTCCTGCTGGGTGTCCCCGGAAACGCTCTGGTGGTGTGGGTGACAGGGTTCTGCATGCCGCGCACTGCCACCTCCCTCTGGTTCCTGAACCTCGCGCTGGCTGATCTTCTGTGCTGCCTCTCCATCCCTCTGCTCATGGTCCCTATAGCCCACGATGACCACTGGCACTTCGGCTCGCTGGCCTGCACATTAATCAAAAGCCTGTTTTACCTGGTGATGTACTGCAGTGTCCTGCAGCTGGTTTTGATCAGTGTGGATCGCTGGATGCTGGTCAGCAGACCCGTCTGGTGTCAGAACAACAGGCGACCTAAGCGggctgtctgcgtgtgtgttgcTGTCTGGTGCCTGGCCCTGATAGGCAGCATTCCCCAGTTTTATTACACCAAGGAGATCaaagcaggtgaaaacaagcgAGAGTGCCTGACAGTACACACTACAAAACACGGTGCCTGGCTCTTCATATCCATCCGCTTCCTGCTGGGATTCTTCCTCCCTTTCCTGGTGATTGTAGTGAGTCACGTGGTGGTGTACAGGAGAGCAGAGAGCGGGCTGACCCGTGCTCGGACCCGCTCCAAGCGCACCCTGAGGGTCATCCTCGCTGTGGTGATGAGCTTTTTCCTCTGCTGGCTCCCACTACACATTGTGGACTTTCTCACATTGACGGTCTCTCGGTCATCCATTCACAGCCCAAACATTTACCTGGCACAGGTTTTAACACTCTGTCTGGCGTATTTCAACAGTTGCCTGAACCCGCTGCTCTACGTGTGTCTGGGCCGGGGCTTCAAAGACAGCATGAACCGCTCACTGCGCGGCATGCTCCAGTTCATCAGCGAGGACCCCACGACCAAGATGAGCATCACTAATAACGACACCAAGAGCTCGAGCAACGGGAAGGAGACAACTAAAATCTGATGTTGTATTGAGTTTGATATAGTGTGTAGTAGCCTACGTTTGTAGTAGCCTAGTAGTTTGGTGTCTACTGTGTATGCtgttcttttaaaaatgttggaTCTCCATAGGTAGGATATAGTTTAACAAGGGCCACCCCTTCTCTACTCACTGCATTGCAACTGGGAATCCTAACCATTGGGTTTCACCATAAACTACCTGTGTTaagaattaattttttttttgacacactgGTCAAATAAGCTGAAGAAAAACTTCAATATTTGAAAGTGTGAACAGCAACCTCTGCTGTATATTTTGATAAGGATTTTTGCTTATGCAACTGAACAACATATGCAAAGATGTAATCCTGACTGCCTCAGGAATGAAAATCaggaactgttttttttattatttgccaaTCAGCAAAATTTCCTGTAAACTTGTCTAATGCTGTTGCAACTGCTCCCACTTCTGTTTTTTGCTCCTACACAAGGATGATCTCAGACTGTTTATAGTCATATTGTCATTAATAGGAATGTAGAAATGGCCTGAGTCTCTATAACTCTTAGTTGTAATTCAAGTTTGTTGtcagaaatataattttctatTAATAAATAAGAATGTATTCTTGTTATTCCTGTAAGACACAGCTACGTCCTCTTGTGTAACAGTACTATGCATAGACCACAGGAGGGAGCTACACTCTAAATCGCTTATATTCAGTGGCCAAGGTGCAGATGCATGTAGCTTCTGGCCTGAGACCCATTGTTTTAGTGTGTCAGACCctaaagacaaaaaagagacaATTTAGGGATGTTTGTAAGTTGGTCAAATACATTCAGTTCAAACAAATGCCCCTCTTTGCATGTCTACAGAAGTCTATATGTAAATTCATTAGCATTTTTTACTACTTGCCTAATGCATATTTATGATGTTTTAGATGGATCTTGTTGTACCAGGTCGATTTAAgattaaacaaaacaataacaatgtACCAAAATTAGGAGCAAAATCGCTTTTATTTACAAACTACATTCATTCCAAACAAGGCCACATTATGATATATACAAAAGCATACATATTTACAAGAGTGTCCAAGTCTGAGTCCCTATGTTTCATGAATCTGTGCACTTGTACATAATGTATGTGCATGCATATATGTACACTGGTACCTCACTATGGCCTCTAATAAACCCATTCCTGACTCACA

Function

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0006935 chemotaxis biological_process
GO:0006954 inflammatory response biological_process
GO:0050679 positive regulation of epithelial cell proliferation biological_process
GO:0070374 positive regulation of ERK1 and ERK2 cascade biological_process
GO:0016021 integral component of membrane cellular_component
GO:0004982 N-formyl peptide receptor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039780872.1 True 2620 mRNA 0.43 2 23159296 23162078

Neighbor

gene id symbol gene type direction distance location
rbm7 rbm7,LOC104959492 coding downstream 276843 22875065 ~ 22882453 (-)
barx2 barx2 coding downstream 287706 22860951 ~ 22871590 (-)
LOC120551448 NA coding downstream 360284 22789044 ~ 22799012 (-)
smtla NA coding downstream 806714 22347311 ~ 22352582 (-)
fli1 fli1,LOC106612965,LOC103145351,LOC106905187 coding downstream 925517 22200134 ~ 22233779 (-)
lbhl LOC102301737,LOC102196385,LOC100690809,LOC103154600,LOC108238121,LOC106945137 coding upstream 124 23162202 ~ 23169207 (-)
cfap45 NA coding upstream 116524 23278602 ~ 23283802 (-)
trappc4 trappc4 coding upstream 127318 23289396 ~ 23291463 (-)
sacs sacs coding upstream 152980 23315058 ~ 23341092 (-)
LOC120554161 mipep coding upstream 215016 23377094 ~ 23409078 (-)
G18896 NA non-coding downstream 2792 23155941 ~ 23156504 (-)
G18883 NA non-coding downstream 21037 23137650 ~ 23138259 (-)
G18868 NA non-coding downstream 38362 23044749 ~ 23120934 (-)
G18841 NA non-coding downstream 343316 22815781 ~ 22815980 (-)
LOC120572359 NA non-coding downstream 363657 22794426 ~ 22795639 (-)
G18905 NA non-coding upstream 13386 23175464 ~ 23175714 (-)
G18911 polr2i,rpb9 non-coding upstream 16558 23178636 ~ 23180583 (-)
G18923 NA non-coding upstream 33590 23195668 ~ 23196344 (-)
LOC120546850 NA non-coding upstream 54688 23216766 ~ 23234546 (-)
G18943 NA non-coding upstream 71435 23233513 ~ 23236846 (-)
G18885 gramd1b other downstream 10781 23139213 ~ 23148515 (-)
LOC120551419 LOC100709410,LOC102313657,LOC102784399,LOC102206705,LOC101487802,LOC104941978 other downstream 1152121 21983302 ~ 22007175 (-)
gdpd5b gdpd5,LOC103357216 other downstream 1448933 21664076 ~ 21710363 (-)
LOC120572205 NA other downstream 1544050 21610814 ~ 21615246 (-)
slc6a4a slc6a4,LOC103359260,LOC108228506 other downstream 1897373 21237188 ~ 21261923 (-)
G18948 LOC103474743 other upstream 84525 23246603 ~ 23252420 (-)
LOC120574680 NA other upstream 291469 23453547 ~ 23461044 (-)
atm atm,LOC102794456 other upstream 567410 23729488 ~ 23758826 (-)
slc33a1 slc33a1 other upstream 640437 23802515 ~ 23809452 (-)
G19140 gmps,LOC102797084 other upstream 661743 23823821 ~ 23827954 (-)

Expression


Co-expression Network