lbhl (LOC102301737,LOC102196385,LOC100690809,LOC103154600,LOC108238121,LOC106945137)


Basic Information

Item Value
gene id lbhl
gene name LOC102301737,LOC102196385,LOC100690809,LOC103154600,LOC108238121,LOC106945137
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 23162202 ~ 23169207 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039780884.1
GGACAGGGAGGGATATTGAGAGAGACATGAGGAAGGAAGTTGGATACGGGGGACAAGGGAACGCATGTAGGCTTTGGGCTAACAGACAGACTCAGCACAGACCTGGACAAGTGAGACAGGTTCTGTCCTAACTGACAAAGGAATCCAGGCACACATCCACCTCCTGATCCTCTGCTCAACACCTGGGATATCTAAAGGTTTGGGAACCCCTCCATCCAGGCTTCGCCCTGGAGGCCAAAAGCCTCGCTGAGGGCTCTGCGGAGGGGGAATGCTGTGAGAGCTGCTCACCTCCTCCTGCACCCCTTCTTGTGTCCCCTGTGCTCACCGTGGAGGAGCCGGGCTTCACCACTGTGAGGCTGTGCCAAGATGGAGAAGACATCTGCCTGACAGCAAGTGAGGGATACATGGAGGAGATGAGTGGAGATCCAAACTGTGAAGACATGCAAAGGAAAGACCAACGATTGCCATTCCAGATCTTCCCTGACCCTGTTGAGGTTGTCCGGGGCCCAGAGACCACTTTGAACTGCCTGGACCACGACCATGCGAAGGAGCGTCTACCCTCCATCGTTGTGGAACCCACAGAGGTGAGTGAGGTGGAGAGCGGAGAGCTGCGCTGGCCTCCGGAGAACATGGACATGGAGGAAGACGAGGAGGACCTGTTCCTGGAGCAGTGCATCCCCCCAGCCAATATCGCAGACtggggagaagaggaggaagaagaggagacatCAGTTATACTGAACCAGCAGCAAGGCTTGACACTCATTGACCTTCAGTCAGATGCATTTAGAGATGACACCCCAACCCTTCCACCGAGCAGCGCTCCGGCCCTCAACTGACTTAACCTCAGAGAACTCTGCACCTCTGGTGACCTAGTTAGGAAGCATCCTGATATTAAGTATGTCAAAGTATAGAAACCGGGGAGTTTGTGACAGATGATGCAAAGAGTGAACTGAAAGCCAATCTTGATGAAGAGgaaaacacaagtttttagATGTCAAACACTGATAACAGCTCTACATGCCAACTGTGACATTTAGATCAATGTGTACAAGAAGAGCCAAATACAGACATGCCAGTACGCATAGGAAcagagacacaaatacacacattctCAGACGCACAAATAAAAAGGTCAGCTTGCTGATGTTGGTGACAGAGATTTGAGCAGCATGGTGTCTTTGctgtatttttaaacatttaggTAAACTTTTGCTGACATCGTGACTTTGTGTTTCATTTCCCTTGTTTTCAAATTTTTAAGGGCTCATTGATGTGgcaacacattttcttttctttgtgctTTGTTCATTTTCTATACTTAATCTCTGTCTCTGGTACAGATAACAGCCTATATCTTATTAAACATCTTTCTCGTAGATCATCATTTTGACCCCACACGTGGCTTTTGAGGACATTTAGCTGGTTTTAGCTTCAGTATGAACAGTATTTATTAAAGCGCTGTAAAATACGTTGGCTCTTCTCTGAAACCACTTGCTGTTTTGCTCTGTTTTGCTGAATCTGTGGAGCATTgtaaaatgtgataaaacaaCAGATTTTATTGAACACATCCAatggttattttatttatttcctaatAAAGCAGCAATACTGTATCTCAAATTGGATGTCTCATCATGCGATGTTGTGATCTTAAAATCAGCATTTTACACAGGGAAAAATCACTGGTCAGAGGCTTTTTCTCACAGGATTTGTTGTCAGGCATGTAGAACCAAGAAAAGGAAGGCAGCTCAATATAGTTGATTTTTATAGTTGATTACAACAGTTGTAGACACCATTGAGTTGTAACTGTCTAATAATAGTCTCATTTGTGTGTAGGCCGATCTATGAATTACTTGTATATATGGATAACACAATAAGTTGTTGTGTTAAAATGATTATTATGAATTtgacaataaagtattttgtcccACTAA

Function

NR:

description
uncharacterized protein LOC110504023

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039780884.1 True 1937 mRNA 0.45 4 23162202 23169207

Neighbor

gene id symbol gene type direction distance location
LOC120546095 NA coding downstream 124 23159296 ~ 23162078 (-)
rbm7 rbm7,LOC104959492 coding downstream 279749 22875065 ~ 22882453 (-)
barx2 barx2 coding downstream 290612 22860951 ~ 22871590 (-)
LOC120551448 NA coding downstream 363190 22789044 ~ 22799012 (-)
smtla NA coding downstream 809620 22347311 ~ 22352582 (-)
cfap45 NA coding upstream 109395 23278602 ~ 23283802 (-)
trappc4 trappc4 coding upstream 120189 23289396 ~ 23291463 (-)
sacs sacs coding upstream 145851 23315058 ~ 23341092 (-)
LOC120554161 mipep coding upstream 207887 23377094 ~ 23409078 (-)
brwd1 NA coding upstream 240613 23409820 ~ 23446831 (-)
G18896 NA non-coding downstream 5698 23155941 ~ 23156504 (-)
G18883 NA non-coding downstream 23943 23137650 ~ 23138259 (-)
G18868 NA non-coding downstream 41268 23044749 ~ 23120934 (-)
G18841 NA non-coding downstream 346222 22815781 ~ 22815980 (-)
LOC120572359 NA non-coding downstream 366563 22794426 ~ 22795639 (-)
G18905 NA non-coding upstream 6257 23175464 ~ 23175714 (-)
G18911 polr2i,rpb9 non-coding upstream 9429 23178636 ~ 23180583 (-)
G18923 NA non-coding upstream 26461 23195668 ~ 23196344 (-)
LOC120546850 NA non-coding upstream 47559 23216766 ~ 23234546 (-)
G18943 NA non-coding upstream 64306 23233513 ~ 23236846 (-)
G18885 gramd1b other downstream 13687 23139213 ~ 23148515 (-)
LOC120551419 LOC100709410,LOC102313657,LOC102784399,LOC102206705,LOC101487802,LOC104941978 other downstream 1155027 21983302 ~ 22007175 (-)
gdpd5b gdpd5,LOC103357216 other downstream 1451839 21664076 ~ 21710363 (-)
LOC120572205 NA other downstream 1546956 21610814 ~ 21615246 (-)
slc6a4a slc6a4,LOC103359260,LOC108228506 other downstream 1900279 21237188 ~ 21261923 (-)
G18948 LOC103474743 other upstream 77396 23246603 ~ 23252420 (-)
LOC120574680 NA other upstream 284340 23453547 ~ 23461044 (-)
atm atm,LOC102794456 other upstream 560281 23729488 ~ 23758826 (-)
slc33a1 slc33a1 other upstream 633308 23802515 ~ 23809452 (-)
G19140 gmps,LOC102797084 other upstream 654614 23823821 ~ 23827954 (-)

Expression


Co-expression Network