mrps22 (mrps22,LOC103373397)


Basic Information

Item Value
gene id mrps22
gene name mrps22,LOC103373397
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 19252336 ~ 19257822 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039782243.1
AAAGGTCAGGCCGCCTTGATGAGGTAATAACAAACATGGCGGCGCTCGGTACAGCACGGTGCTTATTTCGGACCTACTCTCGGGTGAAAAATGTTCAAAAGAGCAAGCAAATACTGGTCAGATGTAGCGTCAGGACTCTTTGTAGCGGAACACAAGATAACGCCCTCTTAGACAAAACAATACCCCAGTTCACAGATCCAGCTGTGCAGGACATCCTCACCAGGATAACAGGCCTGGACCTGCAGAAAGTGTTCCGACCCATTAAACAGGAGCTGAAGCCGCCCACATATAAACTCATGACTGATGAGCAACTGGCGCAGGCCGTGGAGTTAGCCACAGAGCAGGCTAAGAAGTTGCTGCAGATGCCCCTTCTCCCAGAGAGGAAGCCCATTAACGATGTGCTGTCTGAGGACAAGATCCTGGATGGCATGGACACAGCCAAATACGTCTTCACAGACATCACCTACAACATCCCACACAGGGAGAGGTTCATTGTTGTACGGGAGCCCAACGGGACCCTTAGAAAGGCAAAATGGGAGGAGAGAGACCGGCTCATTCAGGTCTACTTCCCCAAGGACGGACGCAAACTCTCTGCACCTCTCATCTTCAAGGAGGAGAACCTCAAGATGGTGTTTTCCCAGGACCGTCATGAGGATGTGTTGGACCTGTGTCTGGTCCAATTTGAACCAGACTCCTCAGACTACATCAGGGTACATGCAGCCACCTATGAGGACCTGGACAAGCACGACAAATATGAGCTGCTGCGCTCCACCAGACATTTTGGAGGCATGGCCTGGTACCTGCTCAGCGCTCGAAGGGTGGACGGGCTTATAGTGGACATGCTGAAGAAAGagctgttccACGATGCAGTGAGCCTAGTGTCTCTGTTCCACATGGTCCACCCTCACAGCGACTCAGCACAGGAAGCTGCCAGCCAGCAGGCCACTGGCGCCGACCTGCTAAAGATCTATGCCCAAAAGGAGTCCCAGAGGGCAGGCTACATCGAGCTGGCCCTGCAGGCGTATCAACAGATGGCTAAGAGCTCTGCTGCCTGACTGGCCCACTCTTAGATAGAAATATACAAACGTATTCACAATGAGGAATGGTTCCCATAACCAGAGGAACTAGGACTGAAAACTTCCTCCCATATGTAAAGTACAGCTTTCTATTCTTTCACTGCGTGAGCCAAAGAGTAATATGTGCTCTTTGACTGAAAGGAAAAGCTCCACACTTCACATCCATTTGAAGAATTAGCTTTTAAAGTTCATGTAAGATGCAGTTAGTCATTTATCCAGAGAGAAATTGTATAAAACACTGTCATATTGTCTGTGTATTACATTTGGACTTTTGAGTCAAACCTGATGTGTTAAGTCAAATGATgtacataataaaacaaagatATTTGTACTCGTGTGA

Function

symbol description
mrps22 Predicted to be a structural constituent of ribosome. Predicted to be part of mitochondrial small ribosomal subunit. Human ortholog(s) of this gene implicated in combined oxidative phosphorylation deficiency 5 and ovarian dysgenesis 7. Orthologous to human MRPS22 (mitochondrial ribosomal protein S22).

NR:

description
28S ribosomal protein S22, mitochondrial

GO: NA

KEGG:

id description
K17401 MRPS22; small subunit ribosomal protein S22

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039782243.1 True 1416 mRNA 0.49 9 19252336 19257822

Neighbor

gene id symbol gene type direction distance location
LOC120552531 NA coding downstream 60546 19190494 ~ 19191790 (-)
LOC120552522 NA coding downstream 83210 19168047 ~ 19169126 (-)
LOC120552541 NA coding downstream 86059 19165388 ~ 19166277 (-)
LOC120547915 clstn2 coding downstream 110643 18892806 ~ 19141693 (-)
pxylp1 pxylp1 coding downstream 455253 18776173 ~ 18797083 (-)
her13 LOC103373083,LOC104919393 coding upstream 173537 19431359 ~ 19434295 (-)
her8.2 LOC100691593,LOC105923939 coding upstream 180418 19438240 ~ 19440140 (-)
LOC120548698 NA coding upstream 208841 19466663 ~ 19467908 (-)
rinl NA coding upstream 257441 19515263 ~ 19525581 (-)
sirt2 sirt2 coding upstream 267899 19525721 ~ 19532651 (-)
G18002 NA non-coding downstream 17879 19230919 ~ 19234457 (-)
G17986 NA non-coding downstream 97085 19154962 ~ 19155251 (-)
G17964 NA non-coding downstream 502935 18749198 ~ 18749401 (-)
G17936 NA non-coding downstream 658663 18592975 ~ 18593673 (-)
G17917 farsb,LOC102796683,LOC102210931 non-coding downstream 868797 18383159 ~ 18383539 (-)
G18127 NA non-coding upstream 125581 19383403 ~ 19405361 (-)
G18155 NA non-coding upstream 198391 19456213 ~ 19542671 (-)
LOC120573122 NA non-coding upstream 280553 19538375 ~ 19541130 (-)
G18179 NA non-coding upstream 367581 19625403 ~ 19628640 (-)
G18184 NA non-coding upstream 391394 19649216 ~ 19649652 (-)
LOC120545639 eif4g1 other downstream 1029443 18179013 ~ 18222893 (-)
zgc:165508 fam131a,LOC102799247 other downstream 1100368 18127466 ~ 18151968 (-)
LOC120552194 NA other downstream 1361675 17799999 ~ 17890661 (-)
xaf1 LOC107094331 other downstream 1773433 17472947 ~ 17478903 (-)
G17597 NA other downstream 2321342 16848161 ~ 16930994 (-)
fbxo46 fbxo46,LOC102786997 other upstream 443405 19701227 ~ 19717307 (-)
si:ch211-11n16.2 LOC104927205,LOC101481481,LOC100694251,LOC103369702,LOC107094496 other upstream 542929 19800751 ~ 19810130 (-)
LOC120547993 NA other upstream 879250 20137072 ~ 20141538 (-)
si:ch1073-340i21.1 NA other upstream 1836355 21094177 ~ 21097201 (-)
slc6a4a slc6a4,LOC103359260,LOC108228506 other upstream 1979366 21237188 ~ 21261923 (-)

Expression


Co-expression Network