LOC120547238 (LOC102785257,LOC103373880,LOC104952507,LOC105417105)


Basic Information

Item Value
gene id LOC120547238
gene name LOC102785257,LOC103373880,LOC104952507,LOC105417105
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 13541742 ~ 13555869 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039782746.1
gaggggaaactttaacacagatttgtattcttattgtataatgtcatggaaatttgccgaaaagtcATGGAGAGGTATTGGTTAAAATACGTATGAACCCTGAACATTACCACAAATGACAAAAATTTCCAAGtaggaaaacaaagaaaacgtgtataacaacagaaaatgacatgaacatacacacacacacaaggtcttGGAGACGTATATCCCTGAGATAAGTATTGCACTGGATTTAATGTAGCTGGTTTAACAATAGGATAGATTGATGTATGAAAGAGTTTTTAAGTCTGATGCGATTACAAGAATGAACTCTAAAGCGTCTGTTTGAAGGCAGAAGCTGATATTCACTGTGCAAATGAGCTCCAGCTCAACCAACTACAACAGTAAATCCTGCTTTTACATGAATGCATgagtagtaataataatcaaattatATAATGTCAACATCACGgaatgtgtattttctttttttccgttACCTAACGTTATTGGTGAGTGTGGACGACTGAATAGGACTAAGCCGGCTCTGATAGGACGCAGGACCGTAGTAAGTATgcgtgcttttattttgaagagcATGAACTGGGAAGAGGAAGACGGAATCCGTGTTGTGAGTGGCTCGAGTTTTTCTTTTCACCATAGCGACAATATTGTAGCAGCAAATGCTTATTGCGTTGTTATACAATTTTAGAACTGTAGCTAAATGTGTTAAGTTAGCTGAAATATTAACTTGTCAGAATGTCAGACTTTGAGGCGCAGGTAGGCTCCATTGTGGAGATAATGGTGAATACGGCGGTGACAGAGTTGACCAAAGTTATCGGCGGCTCCGCATCAACCCATCCAGAAGTGTCAGCATCATGTACAACTGAAAACATCAACGGGTCTTTGGATGAGAAGGTGATCCATTTCAGCGTCTTCATGACGTCTTTGGCTCGAGAAGCCGTGGAGAAGATCTGCCAGCTTTTCCACGATTGTTCCTGTCTGCTGCAGTTAGAAGCGACACAGGGCGTTGCAGAGATCGAGGAGCTGAGGAAGAGACTGGAGGTGGCGGAGACGGAGCTGAAGCTGGTGCTGGAGGGCAGCGGAGGCCAGAAGCAAGCGGAGGAGCTGACGGAGGGAAGCAGCGGAGAGAAGGAGGGCCCGAGGCCTTCGACCGACGGAGCAGAAGGAGAGACTGTCCAGAGCCAGCGCTCAGGCAGGAAGAGTCGCAGAGTTGTGGCTAGCGGGGTTGCTAGAGTGAAGAGATCGCCTATAATTCACCTGTGGAAAGTCAGAACTTATGAGGAAAATGTCCAACCTGTGATAATAAAGGAAGAAGAATTGGAGGCAATAGCTGACCAAGCGTCCTCTGATTCGGGTCAGAACAGAGATGACCTGGGCCAGAACAATGATGACGACCCAGACTACCAGTTGGAGCCAGAAGATTCAGACGACGGTGACCCAGGATTCACTACGAGACCTAAACGTGTTGTTAAGCCCAAGGCCCATCGAGGTCGATCAAAGAAGGAGGGCCAGAGTCAGAACCAGCAGCCTCTGAGCTGCAAACACTGCACGAAAACCTTCACCAAGCTGCTGCAGCTCAAAGCCCACCAGGCCGTCCACGGGGCGAACGCTGAGAAGGCCTTCCGCTGCTCTCAGTGTGGCAGAGGCTTTTCACTCCAGCGAAGCCTCAGTGCACACATGCTGCTCCATACTGGTGAGAGACCACACACCTGTGATGTTTGTGGAAAGGGTTTCACCCTGAAGCAGCTGCTGAGGAACCACCAGCGTCTCCATGCTGAGGTCCGGCCGTTTCGCTGCGAAGTGTGCGGAAAGAGTTTCTACCGAGCCCACGGCCTGAAAATGCATCAGATGGTCCACACGGGAGAGCGGGCCTATAACTGCAAGTTCTGCAAGAAAAGCTTCACGATACAAGGTAACCTGCAGCGCCACCTGCGCATTCACACGGGGGAAAAGCCGTTCAGGTGCGAGACTTGTGGCAAAAGCTTCAACCAGGCTGACACTCTGAAAGGCCATAAGCGGATACACAGTGGTGAGCGTCCCTTCAGCTGCGAGACCTGCGGTAAATGTTTCATCCAGAAGAGTGCCTTGAAGATGCACCAGAAGATTCACTCGGGCGAGGACCCGCTGGCGAGCGTAGCCTGCGTAGCGTGCGGCGCTACGATGGCCTGTGTCGACTCGCTTCGCACACACCTCCAGACGCACGCGGCGACCATTCCTTGCACGTGTGTGCTCTGCGGCCGGCGGCTCAGCTCCATCACCGACCTGCGCTCGCACCAGCAGCACCACACGGTGGTCAGGCCTCACAGCTGCGGGCTCTGCGGGAAGAGTTTCAAGTCGTCCAGTTACCTGAAGATTCACCTGAAGGCGCACAGCGGGGAGAAGCCCTTCTCCTGCGACATCTGCGGCCACACATTTACACAGCACAGCAGCCTTAAGTCCCATCAGGCTGTCCACACAGGACAGAAACCGTTCAGCTGTGGCACATGCGGAAAATGCTTCAGCAACACGGGAAACCTGAACAGACACCAGCGTATCCACACTGGGGAGAAGCCTTTCAGCTGCGACACGTGCGGACGCAGCTTCAACCAGGGCAACAGCCTGAAAGCCCATCAGCAGATCCACACCGGGGAGAAACAGTTTATGTGCGACAAGTGTGGGAAGAGTTTCTCCTACCTCAGGAACTTGAAGGACCACAAGTGTTTTTATGTCTGAAGCAAAACTCTGATGAGACGTCAGCCCTGGTGACAGAGCAGATGACGTTAGGCTTCCTTGTACCTGTTGAGGAATGAATGAGTGGATATAGATAATAAAAGAAGACTTTGCTGTGAAAAGTGGTTTTGGTGATTATGAAGTTGGGTTTTGCAGATTTGATTTGTTTTACTGTGAAGCTGGTGGGGAGAGATGCAGTGTGGGGTTGAGATTAGTgaacaaataaatgaacaacTTTTAGATGAAGTTAAAAAAGGCTTAGGTAAGAaccctttttttacattttaagtttAAGGCATTAACTTGAATGCAGTGAGTAATGGTTTAACCAACTTAAAGAgtgcatttattttcttttttcatttgatctccaatagataaataaaatacaactatgacttttttggaaacAATGTCGCCTTGTGTGCATTAAAGAGAATGTGTTGACTAACAATACCGAAACAGTTATTTGTTCCATCTGTAACTACTCTTATGGAGTGTATTTGTTATTTGTCTAATTTGTGAATGTCAGTCAAACTGATAAACATTGAAATCtaaatcca
>XM_039782753.1
gaggggaaactttaacacagatttgtattcttattgtataatgtcatggaaatttgccgaaaagtcATGGAGAGGTATTGGTTAAAATACGTATGAACCCTGAACATTACCACAAATGACAAAAATTTCCAAGtaggaaaacaaagaaaacgtgtataacaacagaaaatgacatgaacatacacacacacacaaggtcttGGAGACGTATATCCCTGAGATAAGTATTGCACTGGATTTAATGTAGCTGGTTTAACAATAGGATAGATTGATGTATGAAAGAGTTTTTAAGTCTGATGCGATTACAAGAATGAACTCTAAAGCGTCTGTTTGAAGGCAGAAGCTGATATTCACTGTGCAAATGAGCTCCAGCTCAACCAACTACAACAGTAAATCCTGCTTTTACATGAATGCATgagtagtaataataatcaaattatATAATGTCAACATCACGgaatgtgtattttctttttttccgttACCTAACGTTATTGGTGAGTGTGGACGACTGAATAGGACTAAGCCGGCTCTGATAGGACGCAGGACCGTAGTAAGTATgcgtgcttttattttgaagagcATGAACTGGGAAGAGGAAGACGGAATCCGTGTTACTTTGAGGCGCAGGTAGGCTCCATTGTGGAGATAATGGTGAATACGGCGGTGACAGAGTTGACCAAAGTTATCGGCGGCTCCGCATCAACCCATCCAGAAGTGTCAGCATCATGTACAACTGAAAACATCAACGGGTCTTTGGATGAGAAGGTGATCCATTTCAGCGTCTTCATGACGTCTTTGGCTCGAGAAGCCGTGGAGAAGATCTGCCAGCTTTTCCACGATTGTTCCTGTCTGCTGCAGTTAGAAGCGACACAGGGCGTTGCAGAGATCGAGGAGCTGAGGAAGAGACTGGAGGTGGCGGAGACGGAGCTGAAGCTGGTGCTGGAGGGCAGCGGAGGCCAGAAGCAAGCGGAGGAGCTGACGGAGGGAAGCAGCGGAGAGAAGGAGGGCCCGAGGCCTTCGACCGACGGAGCAGAAGGAGAGACTGTCCAGAGCCAGCGCTCAGGCAGGAAGAGTCGCAGAGTTGTGGCTAGCGGGGTTGCTAGAGTGAAGAGATCGCCTATAATTCACCTGTGGAAAGTCAGAACTTATGAGGAAAATGTCCAACCTGTGATAATAAAGGAAGAAGAATTGGAGGCAATAGCTGACCAAGCGTCCTCTGATTCGGGTCAGAACAGAGATGACCTGGGCCAGAACAATGATGACGACCCAGACTACCAGTTGGAGCCAGAAGATTCAGACGACGGTGACCCAGGATTCACTACGAGACCTAAACGTGTTGTTAAGCCCAAGGCCCATCGAGGTCGATCAAAGAAGGAGGGCCAGAGTCAGAACCAGCAGCCTCTGAGCTGCAAACACTGCACGAAAACCTTCACCAAGCTGCTGCAGCTCAAAGCCCACCAGGCCGTCCACGGGGCGAACGCTGAGAAGGCCTTCCGCTGCTCTCAGTGTGGCAGAGGCTTTTCACTCCAGCGAAGCCTCAGTGCACACATGCTGCTCCATACTGGTGAGAGACCACACACCTGTGATGTTTGTGGAAAGGGTTTCACCCTGAAGCAGCTGCTGAGGAACCACCAGCGTCTCCATGCTGAGGTCCGGCCGTTTCGCTGCGAAGTGTGCGGAAAGAGTTTCTACCGAGCCCACGGCCTGAAAATGCATCAGATGGTCCACACGGGAGAGCGGGCCTATAACTGCAAGTTCTGCAAGAAAAGCTTCACGATACAAGGTAACCTGCAGCGCCACCTGCGCATTCACACGGGGGAAAAGCCGTTCAGGTGCGAGACTTGTGGCAAAAGCTTCAACCAGGCTGACACTCTGAAAGGCCATAAGCGGATACACAGTGGTGAGCGTCCCTTCAGCTGCGAGACCTGCGGTAAATGTTTCATCCAGAAGAGTGCCTTGAAGATGCACCAGAAGATTCACTCGGGCGAGGACCCGCTGGCGAGCGTAGCCTGCGTAGCGTGCGGCGCTACGATGGCCTGTGTCGACTCGCTTCGCACACACCTCCAGACGCACGCGGCGACCATTCCTTGCACGTGTGTGCTCTGCGGCCGGCGGCTCAGCTCCATCACCGACCTGCGCTCGCACCAGCAGCACCACACGGTGGTCAGGCCTCACAGCTGCGGGCTCTGCGGGAAGAGTTTCAAGTCGTCCAGTTACCTGAAGATTCACCTGAAGGCGCACAGCGGGGAGAAGCCCTTCTCCTGCGACATCTGCGGCCACACATTTACACAGCACAGCAGCCTTAAGTCCCATCAGGCTGTCCACACAGGACAGAAACCGTTCAGCTGTGGCACATGCGGAAAATGCTTCAGCAACACGGGAAACCTGAACAGACACCAGCGTATCCACACTGGGGAGAAGCCTTTCAGCTGCGACACGTGCGGACGCAGCTTCAACCAGGGCAACAGCCTGAAAGCCCATCAGCAGATCCACACCGGGGAGAAACAGTTTATGTGCGACAAGTGTGGGAAGAGTTTCTCCTACCTCAGGAACTTGAAGGACCACAAGTGTTTTTATGTCTGAAGCAAAACTCTGATGAGACGTCAGCCCTGGTGACAGAGCAGATGACGTTAGGCTTCCTTGTACCTGTTGAGGAATGAATGAGTGGATATAGATAATAAAAGAAGACTTTGCTGTGAAAAGTGGTTTTGGTGATTATGAAGTTGGGTTTTGCAGATTTGATTTGTTTTACTGTGAAGCTGGTGGGGAGAGATGCAGTGTGGGGTTGAGATTAGTgaacaaataaatgaacaacTTTTAGATGAAGTTAAAAAAGGCTTAGGTAAGAaccctttttttacattttaagtttAAGGCATTAACTTGAATGCAGTGAGTAATGGTTTAACCAACTTAAAGAgtgcatttattttcttttttcatttgatctccaatagataaataaaatacaactatgacttttttggaaacAATGTCGCCTTGTGTGCATTAAAGAGAATGTGTTGACTAACAATACCGAAACAGTTATTTGTTCCATCTGTAACTACTCTTATGGAGTGTATTTGTTATTTGTCTAATTTGTGAATGTCAGTCAAACTGATAAACATTGAAATCtaaatcca

Function

NR:

description
PREDICTED: zinc finger protein 226-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039782746.1 True 3281 mRNA 0.48 8 13541742 13555869
XM_039782753.1 False 3146 mRNA 0.48 9 13541742 13555869

Neighbor

gene id symbol gene type direction distance location
mark4b mark4,LOC107094871,LOC103373878 coding downstream 11635 13465012 ~ 13530107 (-)
klc3 LOC104964758,LOC103368325 coding downstream 95741 13418951 ~ 13446001 (-)
pak4 LOC103368331 coding downstream 331216 13170383 ~ 13210526 (-)
zgc:152863 LOC103368334,LOC104955327 coding downstream 379784 13145662 ~ 13161958 (-)
eif3k eif3k coding downstream 511097 13024216 ~ 13030645 (-)
LOC120547251 NA coding upstream 411 13556280 ~ 13567554 (-)
LOC120574245 NA coding upstream 12975 13568844 ~ 13574504 (-)
LOC120574254 sptbn4 coding upstream 20224 13576093 ~ 13694036 (-)
kcnk6 kcnk6,LOC104944303 coding upstream 164018 13719887 ~ 13737393 (-)
prx NA coding upstream 209675 13765544 ~ 13811769 (-)
G16751 NA non-coding downstream 143422 13396210 ~ 13398320 (-)
G16737 NA non-coding downstream 181523 13318063 ~ 13360219 (-)
G16716 NA non-coding downstream 285862 13254343 ~ 13255880 (-)
G16709 NA non-coding downstream 376148 13164817 ~ 13165594 (-)
G16706 LOC101165163 non-coding downstream 416080 13123719 ~ 13125662 (-)
G16882 NA non-coding upstream 212030 13767899 ~ 13770080 (-)
G16888 NA non-coding upstream 349335 13905204 ~ 13905788 (-)
G16889 NA non-coding upstream 350035 13905904 ~ 13908030 (-)
G16898 NA non-coding upstream 372474 13928343 ~ 13928714 (-)
G16894 NA non-coding upstream 395192 13951061 ~ 14016471 (-)
sae1 sae1 other downstream 206589 13313443 ~ 13335153 (-)
ccdc9 ccdc9 other downstream 279893 13224914 ~ 13261849 (-)
slc8a2b LOC102291167 other downstream 686015 12664199 ~ 12855727 (-)
srsf7a srsf7,LOC103358184 other downstream 879552 12654605 ~ 12662190 (-)
LOC120544465 islr2 other downstream 911650 12625965 ~ 12630092 (-)
si:ch211-14c7.2 LOC103364094,LOC102787713,LOC101474093,LOC102298349,LOC106947863,LOC103138296,LOC106921473 other upstream 107038 13662907 ~ 13762368 (-)
G16871 blvrb other upstream 145774 13701643 ~ 13708040 (-)
G16880 NA other upstream 200080 13755949 ~ 13823057 (-)
gpr4 gpr4,LOC103368504,LOC104964910 other upstream 522708 14078577 ~ 14086764 (-)
caln1 caln1,LOC103372560,LOC107097061 other upstream 692059 14247928 ~ 14322833 (-)

Expression


Co-expression Network