LOC120547817


Basic Information

Item Value
gene id LOC120547817
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 34748462 ~ 34766133 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039783513.1
GGTACCACTCGTCTACCTGCATTCTCAATGGATGGTGACTATGTCATTGGTGGTGTTTTTGCCATACAccaatacatgcacacagtgaaGCATAACTACACCACCATGCCTGAGCCACTAAGATGCTCCAGGAGTGTTATCCCCCGTGAACTGCGCTTCTCACGCGCAATGATCTTCGCCATTGAGGAGATAAACAACAGCACGGAGCTGCTTTCGGGAATCAAGCTTGGTTATCACATCTACGACTCGTGCGCCTCTGTGCCCGCGACGGTGCATGTGGCATTCCAGCTTTCAAATGGCCTAGACCCGGTGTTTTACACCGGCAACAATTGCTCACAATCTGGTATGGTGATGGCTGTCGTTGGTGAGTCTGCGTCCTCGCCATCCATCAGCATGTCACGCATTATCGGGCCCTTTAACATTCCTCAAGTGAGCCACTTTGCCACTTGTGCATGCCTGTCCGATAAGCAGCAGTACCCAAATTTCTTCAGAACAATTCCTAGTGATCAGTTCCAGGCTGACGCGCTGGCCAAGCTGGTAAAACACTTTGGCTGGACTTGGATAGGTGCTGTCCGGTCAGATTCGGACTATGGCAATAATGGTATGGCGTCTTTCCTGGACGCAGCACGCAAAGAGGGGATCTGTGTGGAATACTCTATATCTTTTGATTGGAACCACCCACGCAGCTGGATCCAGAGAGTAGCTGACATTATCCGCAGGTCAACAGCTATGGTTGTTGTGGCATTTACATCCCCTGGAGACATTAGGATCCTGCTAAAAGAGCTGTCACTTGAGCCTTTTCCACCTCGCCAGTGGATAGGCAGTGAAGCCTGGGTAACAGACCCAGACATGCTGAGGTTCAGCTTCTGTGCTGGAGCCATCGGATTTGGCATTCAGAAATCTGTCATCCCAGGTCTGAGAGACTTCttgctggatctctctccttcTAAAGTTGCTGCCTCTCCAGTGCTTACAGAGTTCTGGGAAGATGCATTCAACTGCAGGCTGGGAAAAAATGCCACAGACAGGCGTGTGTGTGATGGAACTGAAGACATAAAGACGCTCCAGAGCCCGTACACTGACACATCTCAGCTCCGGATCACTAACATGGTATACAAGGCTGTTTATGCAATAGCACATGCTATACATAAAGCAATGTGCCAGAAAACAAATTCTACAACTCGGTGTGACAAACTCACCAGGATAGAATCAAAAGAGGTTCTTACTCAGCTGAAGAAAGTACATTTTTCCCAAAATGGTTATGATGTGTCATTTGATGCAAACGGGGATCCTGTGGCCAGATATGAGCTGGTTAACTGGCAAAAAAGTGAAAGTGGCAGCATTAAGTTGGTGACAGTAGGGCAATACGATGCATCACTGCCGGTGGGCCAGAACTTCCGTATCAACAGGAACCTCACCTGGGTGGACGGTGGCACACAAGTTCCTGTGTCAGTGTGCACTGACAGCTGTCCTCCAGGAACTCGTAAAGTGCTGCAGAAAGGAAAGCCCATCTGCTGTTATGATTGTATACCATGTCCTGAGGGAGAGATTAGCAATGCTACAGattcCCCTGATTGTTTTCCTTGCCCCAAGGAGTTCTGGCCTAATGCTGAGAGAGACACTTGTCTCCCCAAGCCTGTAGAGTTTCTTTCCTACAACGAGGTCCTAGGAATCATCCTGGCTGCATTCTCAGTTGGTGGCGCCTGTCTGGCCATCATAACAGCGGCTGTGTTCTATCGTCACAGGACATCACCGATTGTCAGGGCCAACAACTCTGAGCTGAGCTTcctgctgctcttctccctgaCTCTGTGTTTCTTATGTTCATTAACTTTCATTGGAGCACCCTCTGAGTGGTCCTGCATGCTGCGCCACACAGCGTTTGGAATCACCTTCGTCCTCTGTATGTCTTGTGTTCTTGGAAAAACAATAGTAGTTTTAATGGCCTTCAAAGCTACACTCCCAGGTAGTAATGTgatgaaatggtttggtcctCCACAGCAAAGAATAACTGTAGTGTCTTTCACGTTTATTCAAGTCCTAATATGTACTATTTGGTTAGTTCTTAGTCCCCCTTTTCCAATGAAAAATCTAACCATATACAAGGAGAGAATCATCCTGGAGTGTGCATTAGGCTCAGCTATTGGGTTCTGGGCTGTGCTCGGGTACATAGGTCTACTGGCTGTCTTTTGCTTTGTGTTAGCTGTCCTAGCTCGGAAATTACCTGATAATTTTAATGAAGCCAAGCTCATTACCTTCAGCATGCTGATATTCTGTGCAGTCTGGATCACCTTTATTCCTGCATATCTCAGCTCTCCTGGGAAATTTACTGTGGCTGTGGAGATATTTGCCATTCTGGCCTCTAGTTTTGGACTAATACTGTGTATATTTGCTCCAAAGTGTTTCATCATATTGTTAAAGCCAGAGAAGAACACCAAGAAACATTTAATGAACAAAACTCTATCTTAAGAAATCTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039783513.1 True 2478 mRNA 0.47 8 34748462 34766133

Neighbor

gene id symbol gene type direction distance location
LOC120548153 NA coding downstream 3876 34735651 ~ 34744586 (-)
LOC120551691 NA coding downstream 13841 34717486 ~ 34734621 (-)
LOC120572251 NA coding downstream 39003 34700102 ~ 34709459 (-)
LOC120551684 NA coding downstream 59500 34681877 ~ 34688962 (-)
LOC120547374 NA coding downstream 84819 34658761 ~ 34663643 (-)
LOC120549655 LOC104964223 coding upstream 99507 34865640 ~ 34869420 (-)
LOC120551709 LOC104964223 coding upstream 105740 34871873 ~ 34888054 (-)
plch1 plch1,LOC103364399,LOC101474427,LOC107380077 coding upstream 134297 34900430 ~ 34972206 (-)
c18h3orf33 NA coding upstream 206871 34973004 ~ 34976362 (-)
zgc:112083 NA coding upstream 252113 35018246 ~ 35027432 (-)
G21665 NA non-coding downstream 317164 34431071 ~ 34431298 (-)
G21640 NA non-coding downstream 577967 34169362 ~ 34170495 (-)
G21620 NA non-coding downstream 590016 34090331 ~ 34158446 (-)
G21575 NA non-coding downstream 754209 33993936 ~ 33994253 (-)
G21574 NA non-coding downstream 755469 33992791 ~ 33992993 (-)
G21685 NA non-coding upstream 19790 34785923 ~ 34786236 (-)
G21716 NA non-coding upstream 143232 34909365 ~ 34909721 (-)
G21779 NA non-coding upstream 249914 35016047 ~ 35016280 (-)
G21805 LOC107597532,LOC100125490,LOC103474213,LOC103139657 non-coding upstream 469942 35236075 ~ 35240308 (-)
G21854 NA non-coding upstream 655148 35421281 ~ 35421721 (-)
LOC120570300 NA other downstream 183917 34555835 ~ 34564545 (-)
G21674 NA other downstream 266429 34481458 ~ 34482033 (-)
LOC120548089 gpr149,LOC102798740 other downstream 643642 34093140 ~ 34104820 (-)
mfsd1 mfsd1 other downstream 1119194 33613429 ~ 33629268 (-)
LOC120549978 NA other downstream 1605199 33129495 ~ 33143263 (-)
dyrk1ab dyrk1a other upstream 281045 35047178 ~ 35096251 (-)
zgc:77784 LOC103362442 other upstream 499162 35265295 ~ 35336232 (-)
lrfn1 lrfn1 other upstream 1210609 35976742 ~ 36264039 (-)
taok1a LOC103356490,LOC104958432 other upstream 1543784 36309917 ~ 36330409 (-)
dph1 dph1,LOC102789142 other upstream 1694546 36460679 ~ 36550114 (-)

Expression


Co-expression Network