LOC120547924


Basic Information

Item Value
gene id LOC120547924
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 41886984 ~ 41996347 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039783755.1
TGCGGAGcaggaaaactttttttttttgggggggggaactTGGAGACGGCTGCATCACATCGGAGCTACGTGATGCAAAGTAAAGAACTCTTGTACGCCGAGTTAAGTTTCAAAGGCAACTTTTGTCGTTGAGGCACAATGGGACTCCCCACGCTGGAGTTCAGCGACTCTTTCCTGGACAGCCCGGACTTCAGAGAGCGGCTCAAATGCCATGAAATAGAGCTGGAGCGGACCAATAAATTCATCAAAGACCTCATCAAAGATGGGAACATGCTTATCACTGCGCTCAAAAATCTTTCTGCTGCTGTCCAGAAGTTCTCCCAGTCCTTGCAGGAGTTCCAGTTTGAGTGCATCGGTGATGCAGAGACAGATGACGAGGTGAACATCGcccAGTCATTCAAAGAGTTCTCCCAGCTGTTGACCACtgtagaagaagaaagaagacgCTTGaTTCAGAATGCAGATGATGTGTTGATTACTCCCTTGGAGAGGTTTCGTAAGGAGCAAATCGGTGCTGCCAAGGAGGGGAAGAAGAAATTCGACAAGGAAACAGAGAAATACTACTCCACGCTTGAGAGACACCTCAACTTATCATCCAAAAAGAAGGAAGCCTATCTACAGGAGGCTGACACGCAGATTGATAAGGAGAGACAACTCTTCTACGACGCGTCCCTTGAGTATGTTTTCAAAATACAAGAAGTGCAAGAAAAGAAGAAATTTGAGTTCGTTGAGCCGCTCCTGGCCTTCCTTCAGGGCTTGTTCACATTCTACCATGAAGGATATGAGCTGGCTCACGAGTTTGAGCCGTACAAACAGCAGCTGCAGTTCAACCTACAGAACACACGAAACAACTTTATGAGCACTAAGCAGGAAGTGGAGAAGCTGATGAAGAGGATAAGGTCTGCAGATCAGGACTATAAACCCCCGGGCCAGTGGACGATGGAAGGCTTCCTGTACGTCCAGGAGAAACGTCCCCTGGGATGCACTTGGACGCGTCATTACTGCACATACGAGAAAGGCAGCAAGACCTTCACCATGAGCAACACCGAAACCAAGTCTGCTGGGAAACAGAACGGTCTCGTCGTGAACCAGCCGGAGATGTTCAAGCTCAAGTCCTGCATTCGGAGGAAAACGGACTCCATCGACAAGCGTTTCTGCTTCGATATCGAAGTGATGGAGAGGCATGGCGTGATGACACTGCAGGCACTGTCGGAGTCCAACAGAAGATTGTGGCTGGAGGCCATGGATGGCAAGGAGCCGATTTACAACCTGCCAGCCATATTGAGCAAAAAGGAGGAGACATTTCTTAATGAGGCGGGATTTAACTTCGtaaggaaatgcattgacctGGTGGAGAATAGAGGCTTAACTACAATGGGACTGTACAGAATCGGAGGAGTCAACTCCAAAGTACAGAAGCTGATGACCACGGTCTTTTCATCCAAGGCTCCTGTGGATATGGACCTGGATCCGGAGACGTGGGACAACAAAACTATCACCAGCGGCCTGAAGAATTACCTCAGGTGTCTCTCTGAGCCTCTAATGACATTCAAGCTCCACAAAGACTTTGTCCTGGCTGTTAAGTCCGATGACCAGAACTACAGGGTGTGTGCTGTCCATGCATTGGTTCATAAGCTTCCCGAAAGGAACAAGGAAATGCTGGAGCTACTAATAAAACACCTTGTCACAGTTTCCACTCAAAGCCAGTCCAACTTGATGACGGTGTCCAACCTGGGGGTCATTTTTGGGCCCACCCTGATGCGGTCACAAGAGGAAACCGTGGCCGCCATGATGAACATCAAGTTTCAGAACATTGTGATGGAAATACTTATCGAGAACTTCAACAAGGTTTaacatagtctcgctttgccagaccttcctccacagcCACAATCACTCCATCACTCAGCAGGTTTTAATGAGGGCCCTGTCTGCCTCTTCTCTGGTCCCTGCATAGGTGACACTCTCAGCAGCAGTGCGAGCAGCACTCCCATGGGCAGCATGGAGTCTTTGTCCTCCCACTCCTCCGAGCAGAACAGCTCCTCCAAAACCGCTTCCTGTTCTCAGGCCAAGGACAAGTCGCTGCCGGACCTCCGCCGCTCGCCGTCCCAGCTCTCAAACGGCCCCAGGAGCgctgtgtgtgtcagcagcCCCGAGTCCAGCTCCAGGGAGGACACCGGGCATACAGACAGAGAGTCTGAGGACGCCGTCAGCCTGTCCTCAGTCAGCGCCGTGCCCTGGCTGTCGCCCGCCCCCAAAAAAGCCCCGCACTGCCGCATCGACCTCAGGCCGGCCCTGCTGAACCGCTCAGCTGCTCCCTCTCTGAAATCACTGCATATATCTGAAGGCCACAGGAGCTGCTCTGGATCTGTCCAAAGTCTGTCCAAACTGGATCCCAGTGAGAGTTTAAAGCCTGCCAAGCAGCCAGACCTTCCACCCAAACAAGTGCTGCGCTGCAGGATGGACGCCTCCGTCAGCAACGGCTACCAAAGACCTGGCTCAGTGGTCGCTGCCAGAGCACTGCTTTTTGAAAATGCCTCTTCCCCACAATCTGTTCCAGTCGGAAGAGACGCCAAAGCGATGTATTCCTGCGAGGCAGAGCACAGCCACGAGCTCAGCTTCCCCCAGGGGGCGCACTTCTCAAACGTCTACCCGTCTGTTGAACCAGGCTGGCTCCAAGCAACATACGAGGGGAAAAAAGGTTTAATCCCTGAGAATTACGTCGTCTTCCTCTAACAAGATTTTAAACATTGCATCTTTTTCATGGcatccatgaaaaaaaaaaattataatacacAATGTGGCTGAttgttgtaatgtttgtgtttttgctggTAACTGAAATTTGTCTTAGCAgatgctttaaaggtcccatgacatggtgctctttgaatgcttttatatagaccttagtggtcccctaatactgtatctgaagtctcttttatatacagtagg

Function

GO: NA

KEGG:

id description
K20651 ARHGAP42, GRAF3; Rho GTPase-activating protein 42

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039783755.1 True 2958 mRNA 0.50 24 41886984 41996347

Neighbor

gene id symbol gene type direction distance location
cep126 NA coding downstream 34434 41833504 ~ 41852550 (-)
yap1 yap1 coding downstream 59035 41795353 ~ 41827949 (-)
ndufc2 ndufc2,LOC101465984,LOC102192131,LOC100708544 coding downstream 608280 41276007 ~ 41278704 (-)
rcbtb2 rcbtb2,LOC100697269 coding downstream 737877 41132687 ~ 41149107 (-)
lpar6a lpar6,LOC104952799,LOC101069375,LOC103363548 coding downstream 767689 41116678 ~ 41119295 (-)
ttc36 ttc36 coding upstream 270727 42267074 ~ 42269422 (-)
fat3a fat3 coding upstream 396941 42393288 ~ 42621960 (-)
gal3st2 LOC104950586 coding upstream 743289 42739636 ~ 42768566 (-)
LOC120549271 NA coding upstream 908466 42904813 ~ 42910737 (-)
efhd1 efhd1,LOC100691052,LOC101463816,LOC102780618,LOC103377704 coding upstream 996444 42992791 ~ 43063245 (-)
G23258 NA non-coding downstream 91681 41768118 ~ 41795303 (-)
G23161 NA non-coding downstream 570901 41315871 ~ 41316083 (-)
G23151 NA non-coding downstream 595074 41291705 ~ 41291910 (-)
G23141 NA non-coding downstream 629618 41255374 ~ 41257366 (-)
G23130 fndc3a non-coding downstream 688014 41196693 ~ 41198970 (-)
G23328 NA non-coding upstream 240321 42236668 ~ 42237159 (-)
G23330 NA non-coding upstream 260206 42256553 ~ 42256963 (-)
G23344 NA non-coding upstream 316208 42312555 ~ 42313214 (-)
G23354 NA non-coding upstream 341315 42337662 ~ 42337866 (-)
G23395 NA non-coding upstream 646723 42643070 ~ 42643280 (-)
cadm2b cadm2,LOC100695412,LOC103378151,LOC106520568,LOC102793287 other downstream 1416808 40290005 ~ 40470176 (-)
LOC120546248 LOC103363423,LOC101478053,LOC102201911,LOC102303851 other downstream 1853828 39943571 ~ 40033156 (-)
LOC120570635 sel1l3,LOC103353588 other downstream 3151161 38727508 ~ 38735823 (-)
robo2 NA other downstream 3238385 38353024 ~ 38648599 (-)
p4ha3 p4ha3 other downstream 4140702 37732841 ~ 37746282 (-)
cntn5 NA other upstream 33326 42029673 ~ 42167037 (-)
LOC120574039 nlk,nlk2 other upstream 1240335 43236682 ~ 43346673 (-)
LOC120553425 NA other upstream 1704624 43700971 ~ 43716741 (-)
smco4 NA other upstream 1773719 43770066 ~ 43789435 (-)
mrps23 mrps23 other upstream 2820281 44816628 ~ 44824993 (-)

Expression


Co-expression Network