LOC120548153


Basic Information

Item Value
gene id LOC120548153
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 34735651 ~ 34744586 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039784214.1
CCCCCTGCATTTGCAATGAATGGTGACTACGTTATTGGTGGTGTTTTCTCCATACACTACTACATGCACACAGTGAACCATAACTACACCACCATGCCTGAGCTCCCAAGATGCACAGGAAGCATTGACTCACGTGAACTGCGCTTCTCACGCGCAATGATCTTCGCCATCGAGGAGATAAACAACAGCACGGAGCTGCTGCCGGGAATAAAACTCGGTTATCAGATCTACGACTCGTGCGCCTCGGTGCCCGTGGCGGTGCACGTGGCATTCCAGCTTTCAAATGGCCTGGACCCGGTGTTTTACACTGGTGACAATTGCTCGCATtctggtatggtgaaggctGTCGTTGGTGAGACTGGGTCCACGCCATCCATCAGCATGTCGCGCATTATCGGGCCCTTTAACATCCCTCaaGTGAGCCACTTTGCCACTTGTGCATGTCTGTCCGATAAGCAGCAGTACCCGAGTTTCTTCAGAACCGTCCCTAGTGATCAGTTCCAGGCTGACGCGCTAGCCCAACTGGTAAAACACTTTGGCTGGACTTGGATAGGTGCAGTCCGGTCAGATTCGGACTATGGCAATAATGGTATGGCGTCTTTCCTAGACGCAGCAAACAAAGAGGGGATCTGTGTGGAATACTCTGAATCTTTCTATTGGAACCACCCACGCAGCAAGATCAAGAGAGTAGCTGACGTTATCCGCAGGTCGACAGCTATGGTTGTTGTGGCATTTACATCCCCTGGAGACCTGAGGATTCTGCTGGAGGAGCTGTCACTTGAGCCTTCTCCACCTCGTCAGTGGATAGGCAGTGAAGCCTGGgtaacagacacagacatgcgGAGGTTCAGTTTCTGTGCTGGAGCCATCGGATTTGGCATTCAGAAATCTGTTATTCCAGGTGTGAGAGACTTCttgctggatctctctccttcTAAAGTGGCTGCCTCTCCAGTGCTTACTGAGTTCTGGGAGGATGCATTCAACTGCAGGCTGGGAAAAAGTGCAGCCATAAACAAGAGATTATGTGATGGAACTGAAGACATAAAGACGCTCCAGAGCCCGTACACTGACACATCTCAGCTCCGGATCACTAACATGGTATACAAGGCTGTTTATGCAATAGCTCATGCCATTCATAAAGCAGTGTGCCAGAAAACAAATTCTACAACTCAGTGTGATAAATTCACCAGGATAGAATCCAAAGAGGTTCTTATTCAGCTGAAGAAAGTGAATTTTTCCCGAAATGGTTATGATGTGTCATTTGATGCCAACGGTGATCCTGTGGCCAGATATGACCTGGTTAACTGGCAAAAAAGTGAAAGTGGCAGCATCAAGTTAGTGACAGTAGGGCACTACGATGCATCACTGCCAGTGGGCCAGAAGTTCTGTATCAACAGGAACATCACTTGGGTGGATGGTGGCACACACGTTCCTGTGTCAGTGTGCACTGACAGCTGTCATCCAGGAACTCGTAAAATGCTGCAGAAAGGAAAACCCATCTGCTGTTATGATTGTATACTGTGTCCTGAGGGAGAGATTAGTAATGCTACAGaTTCTACTTATTGTTTCCCTTGCCCCAAGGAGTTCTGGCCtaatgcagagagagacacttgTCTCCCCAAACCTGTAGAGTTTCTTTCCTACAACGAGGTCCTAGGAATCATCCTGGCTACATTCTCAGTTGGTGGTGCCTGTCTGGCCATTATAACAGCGGCTGTGTTCTATCGTCACAGGACATCCCCGATTGTCAGGGCCAACAACTCTGAGCTGAGCTTcctgctgctcttctccctgaCTCTGTGTTTCTTATGTTCATTAACTTTCATTGGAGCACCCTCTGAGTGGTCCTGCATGCTGCGCCACACAGCGTTTGGGATCACCTTCGTCCTCTGTATGTCTTGTGTTCTTGGAAAAACAATAGTAGTGTTAATGGCCTTCAAAGCTACACTCCCAGGTAGTAATGTgatgaaatggtttggtcctCCACAGCAAAGAATGACTGTAGTGTCTTTTACGTTTATTCAAGTTTTAATATGTACTATTTGGTTAATTCTTAGTCCCCCTTTTCCAATGAAAAACCTAACCATATACAAAGAGAGAATCATTCTGGAGTGTGCATTAGGCTCAGCTATTGGGTTCTGGGCTGTGCTCGGGTACATAGGCCTACTGGCTGTCTTTTGCTTTGTGTTAGCTGTCCTAGCTCGGAAATTACCTGATAATTTTAATGAGGCCAAGCTCATCACCTTCAGCATGCTGATATTCTGTGCAGTCTGGATCACCTTTATTCCTGCATATCTCAGCTCTCCTGGGAAATTTACTGTTGCTGTGGAGATATTTGCCATTCTGGCCTCTAGTTTTGGACTAATATTGTGCATATTTGTTCCTAAGTGTTTTACCATATTGGTTAAGCCAGAGAAGAACACCAAGAAACATTTAATGAACAAAAATCAATCCTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039784214.1 True 2460 mRNA 0.47 8 34735651 34744586

Neighbor

gene id symbol gene type direction distance location
LOC120551691 NA coding downstream 1030 34717486 ~ 34734621 (-)
LOC120572251 NA coding downstream 26192 34700102 ~ 34709459 (-)
LOC120551684 NA coding downstream 46689 34681877 ~ 34688962 (-)
LOC120547374 NA coding downstream 72008 34658761 ~ 34663643 (-)
LOC120547358 NA coding downstream 86318 34643847 ~ 34649333 (-)
LOC120547817 NA coding upstream 3876 34748462 ~ 34766133 (-)
LOC120549655 LOC104964223 coding upstream 121054 34865640 ~ 34869420 (-)
LOC120551709 LOC104964223 coding upstream 127287 34871873 ~ 34888054 (-)
plch1 plch1,LOC103364399,LOC101474427,LOC107380077 coding upstream 155844 34900430 ~ 34972206 (-)
c18h3orf33 NA coding upstream 228418 34973004 ~ 34976362 (-)
G21665 NA non-coding downstream 304353 34431071 ~ 34431298 (-)
G21640 NA non-coding downstream 565156 34169362 ~ 34170495 (-)
G21620 NA non-coding downstream 577205 34090331 ~ 34158446 (-)
G21575 NA non-coding downstream 741398 33993936 ~ 33994253 (-)
G21574 NA non-coding downstream 742658 33992791 ~ 33992993 (-)
G21685 NA non-coding upstream 41337 34785923 ~ 34786236 (-)
G21716 NA non-coding upstream 164779 34909365 ~ 34909721 (-)
G21779 NA non-coding upstream 271461 35016047 ~ 35016280 (-)
G21805 LOC107597532,LOC100125490,LOC103474213,LOC103139657 non-coding upstream 491489 35236075 ~ 35240308 (-)
G21854 NA non-coding upstream 676695 35421281 ~ 35421721 (-)
LOC120570300 NA other downstream 171106 34555835 ~ 34564545 (-)
G21674 NA other downstream 253618 34481458 ~ 34482033 (-)
LOC120548089 gpr149,LOC102798740 other downstream 630831 34093140 ~ 34104820 (-)
mfsd1 mfsd1 other downstream 1106383 33613429 ~ 33629268 (-)
LOC120549978 NA other downstream 1592388 33129495 ~ 33143263 (-)
dyrk1ab dyrk1a other upstream 302592 35047178 ~ 35096251 (-)
zgc:77784 LOC103362442 other upstream 520709 35265295 ~ 35336232 (-)
lrfn1 lrfn1 other upstream 1232156 35976742 ~ 36264039 (-)
taok1a LOC103356490,LOC104958432 other upstream 1565331 36309917 ~ 36330409 (-)
dph1 dph1,LOC102789142 other upstream 1716093 36460679 ~ 36550114 (-)

Expression


Co-expression Network