LOC120548171 (LOC100701857,LOC103364405,LOC102289028,LOC102776134)


Basic Information

Item Value
gene id LOC120548171
gene name LOC100701857,LOC103364405,LOC102289028,LOC102776134
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 35041121 ~ 35046088 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039784237.1
CATCGTCCTGCAAAACGATATACTCCAAATTCAACCGTTGTGTGATTGTAATCCTGAATCTACTCTAAACTGTTTGATAGTTGTTCATGGGAACGCCTATCAGACACTATTCGAGGTCACATACGTTGTTTGTTAGCGTTAGAAATCACCTGCGTCCACAAGACTCTCCAAACGAAAGCGCCAAAGTAAGCAGATGATAAAATAGTCAGCTAAATCAGCTAAGCTAACTACCTAGCTTGAAGCATGCCGAATTTTTGCGCGGCCCCTAACTGTACACGGAAGAGCACACAGTCAGATTTGGCATTTTTTCGGTTTCCACGGGACCCTGAGAGATGCCGAATCTGGGTAGAGAACTGCCGCAGAGCAGATCTAGAGGCGAAAACATCAGACCAGCTGAACAAGCACTACAGATTATGTGCCAAACACTTCGACCCAGCAATGGTTTGTAAAACGAGCCCCTACAGGACTGTATTGAAGGATACAGCCATTCCAACCGTGTTTGACCTGACAAGCCATCTAAAAAATCCTCATACCAGACATCGCAAGCGGATTAAAGAACTTACTGAAGAAGATTTAAGGAAGATTAAAGAAAGGCGATTGGCATCTTCCATTGAACAGCTTTCCTCCAAAAAAGATGCCGCCATTGAGGATAGCACGAGCGCCAACGAGGATGAACCGCAACTGTCCACAGAGGAGAAGGAGTTCCGCGAATACCTGCGATCCCTGTTTGAGGTTGTGGTCATGTTAGGGAAACAGAGTATCCCATTAGTGACTGGCAAGGCGTCTGAAGCCGAACACGTGTCCAACAACTTCCAGGCCGTTCTAGATTACCGCATGAATGCCGGAGATGAAGCTTTGAGGAGGCGCTTTCAGGCGACCGCTGTGAACACAGAATACCTGTGTGCAGTCCAGCAGAGCCAGCTGTTGGACGTCTGTGAGAATACAGTGAGAGAGGAGATGCTGATGGAGGTGAGGGAGAGTCGCTTCTTCTCCCTAGTGACGGGTGGCCTGGTCGAATTTGCCGACGAGAAACACCTGCCTCTGTTTTTACGCTTTGTGAATCAGCACAACGTCCTGCGAGAGGAGTTTTTGGACTTCATGTCGTTTGGCGGGGATGAGGCTGCGCTGGTGGAGAGGCTGGAGGCCCACCTGACTGACCGTTGGGGGCTCAGCATGGAGGACTGCCGTGGTCAGGCCCACAAGGCCACCGGGACGTCCACCACCAAGATGAAAGCTGTGGCAGTATTACTGATGGAGAAGTATCCCCTGGCACTGCATCTGCCTTGCTCTCATACGGCACTGAACATCCACCTGGCCAACAATCTTCCTTTTCCCAATGTCCAGGTCGTCATGGAGACTCTGCGAAGGATCGGCGCTTTCTTCACGACCCCGTTTACTCAGGACGAGCTCGGAGCCATCTATACTCACTACCAGAAAAACGAAGAGAAAGGAACCGCGGTGAAGGAAGCCTCCGGCCCAGGATGGACCGAGCAGCACAACGTGTTTGATGTGCTGCTGGATATGTTGCCGGCCCTGCTGCTGTGCATGGACCGCATTCGGGACAACGGCGACGGCAAGTTTGCCGACGCCGTCGCAGCAGACGCGTACGCAGTCACGGAAACCCTGTCCGACTTTGAGATCGTCGTCACCGTCGTCATCCTGAAGAATGTCCTCACCTTCACCAGAGCCTTCGGGAGGAATCTCCAAGGGGAAACGCTCGACGTGTTTTTCGCCGCCAACAGTCTAACCGCCGTGCTGCATTCGCTAAACGAGGTCAACGACAACATCGACGTCTACCACGAGTTCTGGTACGAGGAGGCCGTGAGCGTGGCCAACGTGATGGGGGTTCCCGTGAAGGTGCCGAGGCTGTTTCTCCGGAAACAGCGTGCAGCCGACGTGGGCGAAATCCAAGCCGAGGCGTACTTCAAGGAGTACGTGACGGTGCCCGTTATCCATGGCGTCATGCAGGAGGTGGAGGACATGTTCTCCGAGACCAACCTCAAAGCCCTTAAGTGCCTGTCGCTGGTCCCGGCCGTCATGGGCCAAATGAAGTTCAACACCACCGAGGAGAACTACGCCGAAGTCTACCGCAACGACCTGCCCAACCCGGACACGCTGCCCGCCGAGCTTCACTGCTGGAGAATCAAGTGGAAGCACAGGGGCAAAGAGGTGCGCCTGCCCACCACCATCCACGAAACCCTTCAGCTGCCAGACGTCAAGTTCTTTCCCAACGTGAACTCCTTCCTCAAGGTGCTCGCCGCCCTGCCAGTTCTGAAGCTGGAGGACGGCAAAAGTGACACGGCGAGCGAGCGGCTGCAGGCTTATCTCGACAGCACGCCCGCCGAGCAGTGGAACAAGAGTCTCGCGATGCTCAACATTAACACTCGCGTCAAACACGACCTGGATGTCATGGTAGACAAATATTGCAGACTCTATTCAGAGGATgatcctgaacctgaacccGAAGCCGAAGCAGAGGCCGAGCCCGAGCCCGAGGAAGTGGCTGAGGAAGATGCTGCGATGAAATGATGTGGCACGGACACTGAATTCGCTAAAGGTGTtctgggacaaaaagaaaagaaatgtatgTTATCAGTCATAAATGCATCCTCCCTCATTTATGTTTTGGTGTACGTACACCTAGATATACGTACTGAGGATTTTAACGCAGAGGATTACAGGTAACGGATGCCATTTGTGTTCAGTCCCTGAGGtttccaagaaaaaaaagaaatggcccTTTTTCTTATTGTATGTTGTTAAAACAATACCTCATGGagactcaataaaaaaaaagtgcaacacCACAAAATGTTTGGAGATGTAAGACTGTCAGGGGCGCGATCTGTAAATATTCAAAGTTCTGAGTCCTTGTCAGGCTGTTTTTTAACATGACTAGCCTCCTCTGTAATGATGCTGTGATCTTAAGGAAAGTATTTTGtagcctttttattttatttgttgcaTTTGGTAGATGcgttttctttttgtaaaaaCCGTAACGGCCATAAGCGTCTCATTCACTATTAACTTTTCTCCATCGTGGGCTTCTGATTGACATGAGGAAGCCAGGTGGCCCTGTTGATTCCTCTCCACTGACTGTGAGGCAGAAGGAGCACAAGAGGGAGCAGTTACACCAATATCAGCTGTTCTGTAAATTCATGCTCAGTGAGAAGACATTTCTTTTCATAAACAAAAAGTGTATACTGCTGGTGTGACATATTTTGGATAGTTAAAAAAGGCCAGTATGTTGAAAGTATACATGTACATTTAAAGGGTACATTCACATTGACACAGCATTTGATCaaatcaagaaaagaaaaaaatttgaCACAACTCTGAATGTAGAAGTATTTTTATGTTATTGTGGTCAATATGTAGGCTATGGCAAgatggggcttttttt

Function

NR:

description
PREDICTED: 52 kDa repressor of the inhibitor of the protein kinase

GO:

id name namespace
GO:0003676 nucleic acid binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039784237.1 True 3406 mRNA 0.50 6 35041121 35046088

Neighbor

gene id symbol gene type direction distance location
map6b LOC103364403,LOC102775646,LOC100702126,LOC101476458 coding downstream 332 35034692 ~ 35040789 (-)
zgc:112083 NA coding downstream 13689 35018246 ~ 35027432 (-)
c18h3orf33 NA coding downstream 64759 34973004 ~ 34976362 (-)
plch1 plch1,LOC103364399,LOC101474427,LOC107380077 coding downstream 68915 34900430 ~ 34972206 (-)
LOC120551709 LOC104964223 coding downstream 153067 34871873 ~ 34888054 (-)
trnap-cgg NA coding upstream 790 35046878 ~ 35046949 (-)
LOC120553235 NA coding upstream 20910 35066998 ~ 35110606 (-)
LOC120548790 LOC103364414 coding upstream 109100 35155188 ~ 35161813 (-)
LOC120544225 NA coding upstream 179127 35225215 ~ 35228072 (-)
lim2.3 LOC100696479,LOC102233234,LOC101068011,LOC107083386,LOC104944607,LOC105023215 coding upstream 209289 35255377 ~ 35257619 (-)
G21779 NA non-coding downstream 24841 35016047 ~ 35016280 (-)
G21716 NA non-coding downstream 131400 34909365 ~ 34909721 (-)
G21685 NA non-coding downstream 254885 34785923 ~ 34786236 (-)
G21665 NA non-coding downstream 609823 34431071 ~ 34431298 (-)
G21640 NA non-coding downstream 870626 34169362 ~ 34170495 (-)
G21805 LOC107597532,LOC100125490,LOC103474213,LOC103139657 non-coding upstream 189987 35236075 ~ 35240308 (-)
G21854 NA non-coding upstream 375193 35421281 ~ 35421721 (-)
G21885 NA non-coding upstream 536393 35582481 ~ 35582706 (-)
G21941 NA non-coding upstream 789901 35835989 ~ 35837435 (-)
G21953 NA non-coding upstream 819687 35865775 ~ 35872049 (-)
LOC120570300 NA other downstream 476576 34555835 ~ 34564545 (-)
G21674 NA other downstream 559088 34481458 ~ 34482033 (-)
LOC120548089 gpr149,LOC102798740 other downstream 936301 34093140 ~ 34104820 (-)
mfsd1 mfsd1 other downstream 1411853 33613429 ~ 33629268 (-)
LOC120549978 NA other downstream 1897858 33129495 ~ 33143263 (-)
dyrk1ab dyrk1a other upstream 1090 35047178 ~ 35096251 (-)
zgc:77784 LOC103362442 other upstream 219207 35265295 ~ 35336232 (-)
lrfn1 lrfn1 other upstream 930654 35976742 ~ 36264039 (-)
taok1a LOC103356490,LOC104958432 other upstream 1263829 36309917 ~ 36330409 (-)
dph1 dph1,LOC102789142 other upstream 1414591 36460679 ~ 36550114 (-)

Expression


Co-expression Network