map6b (LOC103364403,LOC102775646,LOC100702126,LOC101476458)


Basic Information

Item Value
gene id map6b
gene name LOC103364403,LOC102775646,LOC100702126,LOC101476458
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 35034692 ~ 35040789 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039784250.1
CGACGACCTCAGGTGATAGTTCACCGTGCAAACTCACACACCCCGGGCATCTCGAAGCATCACACAAATGTGGGTGGGGTCGCTTTTTGATGCGCAACCAGACAGCAAACGTGCACTACACAgcaacccccccctcccccaaagtCCCTTTAAACTTCAGTCAGAACAAATAGCCTgcaggaggacagagagggaggcgTGGGGGGGCTCTACTTCCCTTTAGTCTCAGGCAAAGATCGGTGAGAACAGAGAGTTACATCGAGCTTTAAGGAGGAATAACCCTGACTGGGCAGAAGCAGCACCTGACCGAGCACTTGCAAGTCTCCGAGTCCCTCCCGAGTATTTATCACCATGGCATGGCCGTGCATCACGCGTGCTTGCTGCATCAACCGCTTTTGGACCGAGCTGGACAAAGGGGACATCGCGGTGCCTTTGGTTTTCACCAAATACTCGGATGTGGCCGACTTGCAGCATTTTCCCCATCACCCGCAGCCGAAACTGAAGAGGGCCGGAGCCATTGCCATAGAAACCCAGCCCCATCCCGGCGAGCAGGAGGCTGGGAAGGCACCGCCCGCGACGGGTGCCGCAGCGGGCAATGACGGCTCTGCGTCCGTCATGCGCCAAGACTTCAAGGCGTGGAAAGTGCGCCCCGAGCCCAGCTGCAAACCCAGAAATGAGTACCAACGCTCGGCAGCCCCGTTCAACACCGAAACGCAATACCAGAAGGATTATAAACCCTGGCCTATACCGAAGAAGCACGACCACCCCTGGATCCCCAAACCCAGCCCCACCGCCACCGCCGCCGCCTCCGGTGGGCCGGAGCGCAGCGCGGGGAGCGGAGCGCAGGAGCCTGCGGCCACCGAGGCCGAGAGCGGCGTGGAGAAGAGCGAGCTCGAGGAGAAAACGCAGGAGAAAGAATCAAAGGAGCCGACGAAGAGGAGCGTGAAGAGGGAAAagtcagcagacagacaaacggGCGAGAAGACAGAGGCACAAGTGGCTGCAGATGTGAGCGCCGAGCAGCGGaaaggcagagcagcagcagacgcTCTCAACAGACAGATAAAGCAGGTTATGACGACTTCCAGCAGCTACAGGACTGAGTTCAAGGCGTATAAGGATGTGAAACAAGTGAAGGCCATTAAAGCTCCATCTCAGTTTAAACCCCCAGTGGAGGAGACCAGTCTGGAAACCAGCTACAGCGCCACATACAAGGGGGAGCAGGTGAAGGCTCACCCCGCTGACAACAAGCTGATGGAGCGCAGGAGGATACGCAGCCTGTACAATGAGCCTAGCAAGGAACCTGCCAAGgTGGATAAACCAGTTTCTCGCACCAAACCAAAAAagacaccaacaacaacaacagggaaaatggtgaaaaaatcAAAAGAGAAGCAGATTGCCAGTTCCCAGTCAGCCAAGAAGAAACCATCTTTGGGCGCCCCAGAACCCAAACCAGATGGAGCTGTCACAAAGAAGAGCAAAGAGATTAGCAATAGACTGGCTGAAGCGAAGCAGTAAAAGTAGTTCCTCTCTACACTGCGTGATCAAAAAGGTGACTTGACGAATTAGGCAAATTTCTTCCCTTTGGTTTATTTCCTAACCTGTTGTTTTTGCTGTCCTGTCATATATTGTTCACCTTTGAATGGGCACTGATGTTGAGCTTTTAGAATAATCCAAATAATTTCactgcaaagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagagagagagagagagactgtgttaATGTGTGAAAGTATGTGATttcttgtattttggtgcacagaaCCGCTTTTAGTATTGAGCACATAATTTGCACATTGTTTAAATAACTTCTGTTTGACATTGAACTATAAAAAAGCCATCAGTACACATGTAGTATGTGTATGATAGGACATGTTTACCTTTGTCTGAATGGATAACAATTGAGatcaaaattaaaatgattgtAGAAAATG
>XM_039784259.1
ACGGCGACGACCTCAGGTGATAGTTCACCGTGCAAACTCACACACCCCGGGCATCTCGAAGCATCACACAAATGTGGGTGGGGTCGCTTTTTGATGCGCAACCAGACAGCAAACGTGCACTACACAgcaacccccccctcccccaaagtCCCTTTAAACTTCAGTCAGAACAAATAGCCTgcaggaggacagagagggaggcgTGGGGGGGCTCTACTTCCCTTTAGTCTCAGGCAAAGATCGGTGAGAACAGAGAGTTACATCGAGCTTTAAGGAGGAATAACCCTGACTGGGCAGAAGCAGCACCTGACCGAGCACTTGCAAGTCTCCGAGTCGTGAGTAGGGCGTTTATTTACACCTTATTTCTTATCCCTCGTCTAGAGTTTTTTTCccttgcacattttttttttttgttctcgcCAGCCTCCCGAGTATTTATCACCATGGCATGGCCGTGCATCACGCGTGCTTGCTGCATCAACCGCTTTTGGACCGAGCTGGACAAAGGGGACATCGCGGTGCCTTTGGTTTTCACCAAATACTCGGATGTGGCCGACTTGCAGCATTTTCCCCATCACCCGCAGCCGAAACTGAAGAGGGCCGGAGCCATTGCCATAGAAACCCAGCCCCATCCCGGCGAGCAGGAGGCTGGGAAGGCACCGCCCGCGACGGGTGCCGCAGCGGGCAATGACGGCTCTGCGTCCGTCATGCGCCAAGACTTCAAGGCGTGGAAAGTGCGCCCCGAGCCCAGCTGCAAACCCAGAAATGAGTACCAACGCTCGGCAGCCCCGTTCAACACCGAAACGCAATACCAGAAGGATTATAAACCCTGGCCTATACCGAAGAAGCACGACCACCCCTGGATCCCCAAACCCAGCCCCACCGCCACCGCCGCCGCCTCCGGTGGGCCGGAGCGCAGCGCGGGGAGCGGAGCGCAGGAGCCTGCGGCCACCGAGGCCGAGAGCGGCGTGGAGAAGAGCGAGCTCGAGGAGAAAACGCAGGAGAAAGAATCAAAGGAGCCGACGAAGAGGAGCGTGAAGAGGGAAAagtcagcagacagacaaacggGCGAGAAGACAGAGGCACAAGTGGCTGCAGATGTGAGCGCCGAGCAGCGGaaaggcagagcagcagcagacgcTCTCAACAGACAGATAAAGCAGGTTATGACGACTTCCAGCAGCTACAGGACTGAGTTCAAGGCGTATAAGGATGTGAAACAAGTGAAGGCCATTAAAGCTCCATCTCAGTTTAAACCCCCAGTGGAGGAGACCAGTCTGGAAACCAGCTACAGCGCCACATACAAGGGGGAGCAGGTGAAGGCTCACCCCGCTGACAACAAGCTGATGGAGCGCAGGAGGATACGCAGCCTGTACAATGAGCCTAGCAAGGAACCTGCCAAGGACGTCTCAGAGACTGAGAGCAGCTCTGTTCTAAATCtgctgtagtcaggTGGATAAACCAGTTTCTCGCACCAAACCAAAAAagacaccaacaacaacaacagggaaaatggtgaaaaaatcAAAAGAGAAGCAGATTGCCAGTTCCCAGTCAGCCAAGAAGAAACCA
>XM_039784268.1
GCCAGACGGCGACGACCTCAGGTGATAGTTCACCGTGCAAACTCACACACCCCGGGCATCTCGAAGCATCACACAAATGTGGGTGGGGTCGCTTTTTGATGCGCAACCAGACAGCAAACGTGCACTACACAgcaacccccccctcccccaaagtCCCTTTAAACTTCAGTCAGAACAAATAGCCTgcaggaggacagagagggaggcgTGGGGGGGCTCTACTTCCCTTTAGTCTCAGGCAAAGATCGGTGAGAACAGAGAGTTACATCGAGCTTTAAGGAGGAATAACCCTGACTGGGCAGAAGCAGCACCTGACCGAGCACTTGCAAGTCTCCGAGTCGTGAGTAGGGCGTTTATTTACACCTTATTTCTTATCCCTCGTCTAGAGTTTTTTTCccttgcacattttttttttttgttctcgcCAGCCTCCCGAGTATTTATCACCATGGCATGGCCGTGCATCACGCGTGCTTGCTGCATCAACCGCTTTTGGACCGAGCTGGACAAAGGGGACATCGCGGTGCCTTTGGTTTTCACCAAATACTCGGATGTGGCCGACTTGCAGCATTTTCCCCATCACCCGCAGCCGAAACTGAAGAGGGCCGGAGCCATTGCCATAGAAACCCAGCCCCATCCCGGCGAGCAGGAGGCTGGGAAGGCACCGCCCGCGACGGGTGCCGCAGCGGGCAATGACGGCTCTGCGTCCGTCATGCGCCAAGACTTCAAGGCGTGGAAAGTGCGCCCCGAGCCCAGCTGCAAACCCAGAAATGAGTACCAACGCTCGGCAGCCCCGTTCAACACCGAAACGCAATACCAGAAGGATTATAAACCCTGGCCTATACCGAAGAAGCACGACCACCCCTGGATCCCCAAACCCAGCCCCACCGCCACCGCCGCCGCCTCCGGTGGGCCGGAGCGCAGCGCGGGGAGCGGAGCGCAGGAGCCTGCGGCCACCGAGGCCGAGAGCGGCGTGGAGAAGAGCGAGCTCGAGGAGAAAACGCAGGAGAAAGAATCAAAGGAGCCGACGAAGAGGAGCGTGAAGAGGGAAAagtcagcagacagacaaacggGCGAGAAGACAGAGGCACAAGTGGCTGCAGATGTGAGCGCCGAGCAGCGGaaaggcagagcagcagcagacgcTCTCAACAGACAGATAAAGCAGGTTATGACGACTTCCAGCAGCTACAGGACTGAGTTCAAGGCGTATAAGGATGTGAAACAAGTGAAGGCCATTAAAGCTCCATCTCAGTTTAAACCCCCAGTGGAGGAGACCAGTCTGGAAACCAGCTACAGCGCCACATACAAGGGGGAGCAGGTGAAGGCTCACCCCGCTGACAACAAGCTGATGGAGCGCAGGAGGATACGCAGCCTGTACAATGAGCCTAGCAAGGAACCTGCCAAGGTGGGAGCATGCCCACACACAGATCCACTGATGGTAGTTTAGGACGTCTCAGAGACTGAGAGCAGCTCTGTTCTAAATCtgctgtagtcaggTGGATAAACCAGTTTCTCGCACCAAACCAAAAAagacaccaacaacaacaacagggaaaatggtgaaaaaatcAAAAGAGAAGCA

Function

NR:

description
PREDICTED: microtubule-associated protein 6 homolog

GO: NA

KEGG:

id description
K10432 MAP6; microtubule-associated protein 6

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039784250.1 True 2032 mRNA 0.51 4 35034692 35040780
XM_039784259.1 False 1572 mRNA 0.55 4 35035293 35040784
XM_039784268.1 False 1585 mRNA 0.56 4 35035327 35040789

Neighbor

gene id symbol gene type direction distance location
zgc:112083 NA coding downstream 7260 35018246 ~ 35027432 (-)
c18h3orf33 NA coding downstream 58330 34973004 ~ 34976362 (-)
plch1 plch1,LOC103364399,LOC101474427,LOC107380077 coding downstream 62486 34900430 ~ 34972206 (-)
LOC120551709 LOC104964223 coding downstream 146638 34871873 ~ 34888054 (-)
LOC120549655 LOC104964223 coding downstream 165272 34865640 ~ 34869420 (-)
LOC120548171 LOC100701857,LOC103364405,LOC102289028,LOC102776134 coding upstream 332 35041121 ~ 35046088 (-)
trnap-cgg NA coding upstream 6089 35046878 ~ 35046949 (-)
LOC120553235 NA coding upstream 26209 35066998 ~ 35110606 (-)
LOC120548790 LOC103364414 coding upstream 114399 35155188 ~ 35161813 (-)
LOC120544225 NA coding upstream 184426 35225215 ~ 35228072 (-)
G21779 NA non-coding downstream 18412 35016047 ~ 35016280 (-)
G21716 NA non-coding downstream 124971 34909365 ~ 34909721 (-)
G21685 NA non-coding downstream 248456 34785923 ~ 34786236 (-)
G21665 NA non-coding downstream 603394 34431071 ~ 34431298 (-)
G21640 NA non-coding downstream 864197 34169362 ~ 34170495 (-)
G21805 LOC107597532,LOC100125490,LOC103474213,LOC103139657 non-coding upstream 195286 35236075 ~ 35240308 (-)
G21854 NA non-coding upstream 380492 35421281 ~ 35421721 (-)
G21885 NA non-coding upstream 541692 35582481 ~ 35582706 (-)
G21941 NA non-coding upstream 795200 35835989 ~ 35837435 (-)
G21953 NA non-coding upstream 824986 35865775 ~ 35872049 (-)
LOC120570300 NA other downstream 470147 34555835 ~ 34564545 (-)
G21674 NA other downstream 552659 34481458 ~ 34482033 (-)
LOC120548089 gpr149,LOC102798740 other downstream 929872 34093140 ~ 34104820 (-)
mfsd1 mfsd1 other downstream 1405424 33613429 ~ 33629268 (-)
LOC120549978 NA other downstream 1891429 33129495 ~ 33143263 (-)
dyrk1ab dyrk1a other upstream 6389 35047178 ~ 35096251 (-)
zgc:77784 LOC103362442 other upstream 224506 35265295 ~ 35336232 (-)
lrfn1 lrfn1 other upstream 935953 35976742 ~ 36264039 (-)
taok1a LOC103356490,LOC104958432 other upstream 1269128 36309917 ~ 36330409 (-)
dph1 dph1,LOC102789142 other upstream 1419890 36460679 ~ 36550114 (-)

Expression


Co-expression Network